RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
SNCAIP-202ENST00000261368 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
SNCAIP-202ENST00000261368 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
SNCAIP-202ENST00000261368 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
SNCAIP-202ENST00000261368 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
SNCAIP-202ENST00000261368 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
SNCAIP-202ENST00000261368 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
SNCAIP-202ENST00000261368 HRCP23327 699 aa26.51■■□□□ 1.83
SNCAIP-202ENST00000261368 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
SNCAIP-202ENST00000261368 LOC105371045A0A1W2PR82 267 aa26.37■■□□□ 1.81
SNCAIP-202ENST00000261368 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
SNCAIP-202ENST00000261368 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
SNCAIP-202ENST00000261368 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
SNCAIP-202ENST00000261368 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
SNCAIP-202ENST00000261368 TRIM41Q8WV44 630 aa25.83■■□□□ 1.72
SNCAIP-202ENST00000261368 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
SNCAIP-202ENST00000261368 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
SNCAIP-202ENST00000261368 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
SNCAIP-202ENST00000261368 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
SNCAIP-202ENST00000261368 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
SNCAIP-202ENST00000261368 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
SNCAIP-202ENST00000261368 ABCC9O60706 1549 aa25.14■■□□□ 1.62
SNCAIP-202ENST00000261368 CCER1Q8TC90 406 aaPredicted RBP25.08■■□□□ 1.61
SNCAIP-202ENST00000261368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
SNCAIP-202ENST00000261368 RB1CC1Q8TDY2 1594 aa25.04■■□□□ 1.6
SNCAIP-202ENST00000261368 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
SNCAIP-202ENST00000261368 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
SNCAIP-202ENST00000261368 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
SNCAIP-202ENST00000261368 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
SNCAIP-202ENST00000261368 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
SNCAIP-202ENST00000261368 WIZO95785 1651 aa24.57■■□□□ 1.52
SNCAIP-202ENST00000261368 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
SNCAIP-202ENST00000261368 NACADO15069 1562 aa24.5■■□□□ 1.51
SNCAIP-202ENST00000261368 PELP1Q8IZL8 1130 aaKnown RBP24.48■■□□□ 1.51
SNCAIP-202ENST00000261368 YTHDC1Q96MU7 727 aaKnown RBP24.48■■□□□ 1.51
SNCAIP-202ENST00000261368 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
SNCAIP-202ENST00000261368 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
SNCAIP-202ENST00000261368 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
SNCAIP-202ENST00000261368 NEUROD1Q13562 356 aa24.41■■□□□ 1.5
SNCAIP-202ENST00000261368 ACIN1Q9UKV3 1341 aaKnown RBP24.39■■□□□ 1.49
SNCAIP-202ENST00000261368 APLP2Q06481 763 aa24.37■■□□□ 1.49
SNCAIP-202ENST00000261368 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
SNCAIP-202ENST00000261368 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
SNCAIP-202ENST00000261368 GTF3C3Q9Y5Q9 886 aa24.35■■□□□ 1.49
SNCAIP-202ENST00000261368 CCDC88BA6NC98 1476 aa24.31■■□□□ 1.48
SNCAIP-202ENST00000261368 CEP162Q5TB80 1403 aa24.3■■□□□ 1.48
SNCAIP-202ENST00000261368 SOGA1O94964 1423 aa24.29■■□□□ 1.48
SNCAIP-202ENST00000261368 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
SNCAIP-202ENST00000261368 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
SNCAIP-202ENST00000261368 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
SNCAIP-202ENST00000261368 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
SNCAIP-202ENST00000261368 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
SNCAIP-202ENST00000261368 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
SNCAIP-202ENST00000261368 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
SNCAIP-202ENST00000261368 MIER1Q8N108 512 aa23.93■■□□□ 1.42
SNCAIP-202ENST00000261368 SMARCA4P51532 1647 aa23.93■■□□□ 1.42
SNCAIP-202ENST00000261368 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
SNCAIP-202ENST00000261368 ITGAEP38570 1179 aa23.9■■□□□ 1.42
SNCAIP-202ENST00000261368 EEA1Q15075 1411 aa23.89■■□□□ 1.42
SNCAIP-202ENST00000261368 CLIP1P30622 1438 aa23.87■■□□□ 1.41
SNCAIP-202ENST00000261368 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
SNCAIP-202ENST00000261368 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
SNCAIP-202ENST00000261368 ATP1B4Q9UN42 357 aaPredicted RBP23.66■■□□□ 1.38
SNCAIP-202ENST00000261368 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
SNCAIP-202ENST00000261368 RAPGEF2Q9Y4G8 1499 aa23.6■■□□□ 1.37
SNCAIP-202ENST00000261368 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.36
SNCAIP-202ENST00000261368 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
SNCAIP-202ENST00000261368 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
SNCAIP-202ENST00000261368 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
SNCAIP-202ENST00000261368 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
SNCAIP-202ENST00000261368 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.33
SNCAIP-202ENST00000261368 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
SNCAIP-202ENST00000261368 KIF21BO75037 1637 aa23.32■■□□□ 1.32
SNCAIP-202ENST00000261368 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
SNCAIP-202ENST00000261368 BCANQ96GW7 911 aa23.3■■□□□ 1.32
SNCAIP-202ENST00000261368 DHX57Q6P158 1386 aaKnown RBP23.29■■□□□ 1.32
SNCAIP-202ENST00000261368 MYT1Q01538 1121 aa23.28■■□□□ 1.32
SNCAIP-202ENST00000261368 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
SNCAIP-202ENST00000261368 KIF27Q86VH2 1401 aa23.2■■□□□ 1.3
SNCAIP-202ENST00000261368 DDX10Q13206 875 aaKnown RBP23.2■■□□□ 1.3
SNCAIP-202ENST00000261368 CLSPNQ9HAW4 1339 aa23.18■■□□□ 1.3
SNCAIP-202ENST00000261368 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
SNCAIP-202ENST00000261368 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
SNCAIP-202ENST00000261368 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
SNCAIP-202ENST00000261368 SIN3AQ96ST3 1273 aa23.14■■□□□ 1.3
SNCAIP-202ENST00000261368 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
SNCAIP-202ENST00000261368 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.29
SNCAIP-202ENST00000261368 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
SNCAIP-202ENST00000261368 NEFLP07196 543 aa23.05■■□□□ 1.28
SNCAIP-202ENST00000261368 RAB3GAP2Q9H2M9 1393 aa23.05■■□□□ 1.28
SNCAIP-202ENST00000261368 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
SNCAIP-202ENST00000261368 CUX2O14529 1486 aa23.01■■□□□ 1.27
SNCAIP-202ENST00000261368 FKBP8Q14318 412 aa23.01■■□□□ 1.27
SNCAIP-202ENST00000261368 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
SNCAIP-202ENST00000261368 CUX1P39880 1505 aa22.94■■□□□ 1.26
SNCAIP-202ENST00000261368 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
SNCAIP-202ENST00000261368 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
SNCAIP-202ENST00000261368 ARHGAP35Q9NRY4 1499 aa22.92■■□□□ 1.26
SNCAIP-202ENST00000261368 ANP32CO43423 234 aa22.92■■□□□ 1.26
SNCAIP-202ENST00000261368 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms