Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 LINC00265-3P-201ENST00000447588 903 ntBASIC17.04■□□□□ 0.32
RAPH1Q70E73 KRT17P6-201ENST00000453795 1220 ntBASIC17.04■□□□□ 0.32
RAPH1Q70E73 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.04■□□□□ 0.32
RAPH1Q70E73 INTS4P1-201ENST00000438455 1935 ntBASIC17.04■□□□□ 0.32
RAPH1Q70E73 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAPH1Q70E73 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 NSUN5P1-202ENST00000421140 1535 ntBASIC17.03■□□□□ 0.32
RAPH1Q70E73 NSUN5P2-203ENST00000457352 1529 ntBASIC17.03■□□□□ 0.32
RAPH1Q70E73 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AC087388.1-201ENST00000571370 1112 ntBASIC17.03■□□□□ 0.32
RAPH1Q70E73 AP002414.4-201ENST00000589764 1148 ntBASIC17.03■□□□□ 0.32
RAPH1Q70E73 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 MST1L-201ENST00000442552 2185 ntBASIC17.03■□□□□ 0.32
RAPH1Q70E73 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAPH1Q70E73 AC063926.3-201ENST00000624734 5658 ntBASIC17.03■□□□□ 0.32
RAPH1Q70E73 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.03■□□□□ 0.32
RAPH1Q70E73 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RAPH1Q70E73 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAPH1Q70E73 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms