RNA–Protein interactions for RNA: ENST00000542869.2

PTK6-202, Transcript of protein tyrosine kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK6, Length 2,931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK6-202ENST00000542869 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
PTK6-202ENST00000542869 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
PTK6-202ENST00000542869 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
PTK6-202ENST00000542869 HRCP23327 699 aa27.37■■□□□ 1.97
PTK6-202ENST00000542869 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
PTK6-202ENST00000542869 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.93
PTK6-202ENST00000542869 MYO15BQ96JP2 1530 aa27.02■■□□□ 1.92
PTK6-202ENST00000542869 PPARGC1BQ86YN6 1023 aaKnown RBP26.98■■□□□ 1.91
PTK6-202ENST00000542869 PCGF6Q9BYE7 350 aa26.98■■□□□ 1.91
PTK6-202ENST00000542869 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
PTK6-202ENST00000542869 CHIC1Q5VXU3 224 aa26.79■■□□□ 1.88
PTK6-202ENST00000542869 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
PTK6-202ENST00000542869 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
PTK6-202ENST00000542869 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
PTK6-202ENST00000542869 ABCC9O60706 1549 aa26.01■■□□□ 1.75
PTK6-202ENST00000542869 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
PTK6-202ENST00000542869 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
PTK6-202ENST00000542869 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
PTK6-202ENST00000542869 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
PTK6-202ENST00000542869 NACADO15069 1562 aa25.64■■□□□ 1.7
PTK6-202ENST00000542869 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
PTK6-202ENST00000542869 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
PTK6-202ENST00000542869 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.65
PTK6-202ENST00000542869 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
PTK6-202ENST00000542869 NEUROD1Q13562 356 aa25.23■■□□□ 1.63
PTK6-202ENST00000542869 TRIM41Q8WV44 630 aa25.23■■□□□ 1.63
PTK6-202ENST00000542869 ACIN1Q9UKV3 1341 aaKnown RBP25.22■■□□□ 1.63
PTK6-202ENST00000542869 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
PTK6-202ENST00000542869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
PTK6-202ENST00000542869 GTF3C3Q9Y5Q9 886 aa25.06■■□□□ 1.6
PTK6-202ENST00000542869 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
PTK6-202ENST00000542869 CCER1Q8TC90 406 aaPredicted RBP24.95■■□□□ 1.58
PTK6-202ENST00000542869 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
PTK6-202ENST00000542869 DIEXFQ68CQ4 756 aaKnown RBP24.89■■□□□ 1.58
PTK6-202ENST00000542869 CENPBP07199 599 aaPredicted RBP24.85■■□□□ 1.57
PTK6-202ENST00000542869 WIZO95785 1651 aa24.85■■□□□ 1.57
PTK6-202ENST00000542869 MYT1Q01538 1121 aa24.83■■□□□ 1.57
PTK6-202ENST00000542869 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
PTK6-202ENST00000542869 PABPN1Q86U42 306 aaKnown RBP eCLIP24.76■■□□□ 1.55
PTK6-202ENST00000542869 TTBK1Q5TCY1 1321 aaPredicted RBP24.69■■□□□ 1.54
PTK6-202ENST00000542869 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
PTK6-202ENST00000542869 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
PTK6-202ENST00000542869 YTHDC1Q96MU7 727 aaKnown RBP24.6■■□□□ 1.53
PTK6-202ENST00000542869 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
PTK6-202ENST00000542869 ZNF316A6NFI3 1004 aaPredicted RBP24.41■■□□□ 1.5
PTK6-202ENST00000542869 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
PTK6-202ENST00000542869 MIER1Q8N108 512 aa24.32■■□□□ 1.48
PTK6-202ENST00000542869 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
PTK6-202ENST00000542869 EIF4G1Q04637 1599 aaKnown RBP24.3■■□□□ 1.48
PTK6-202ENST00000542869 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
PTK6-202ENST00000542869 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
PTK6-202ENST00000542869 PEG3Q9GZU2 1588 aa24.18■■□□□ 1.46
PTK6-202ENST00000542869 ATAD2BQ9ULI0 1458 aa24.12■■□□□ 1.45
PTK6-202ENST00000542869 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
PTK6-202ENST00000542869 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
PTK6-202ENST00000542869 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
PTK6-202ENST00000542869 SOGA1O94964 1423 aa24■■□□□ 1.43
PTK6-202ENST00000542869 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
PTK6-202ENST00000542869 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
PTK6-202ENST00000542869 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
PTK6-202ENST00000542869 SUPT16HQ9Y5B9 1047 aaKnown RBP23.87■■□□□ 1.41
PTK6-202ENST00000542869 CSRNP3Q8WYN3 585 aa23.84■■□□□ 1.41
PTK6-202ENST00000542869 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
PTK6-202ENST00000542869 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
PTK6-202ENST00000542869 GOLGA3Q08378 1498 aa23.69■■□□□ 1.38
PTK6-202ENST00000542869 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
PTK6-202ENST00000542869 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
PTK6-202ENST00000542869 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
PTK6-202ENST00000542869 EEA1Q15075 1411 aa23.64■■□□□ 1.37
PTK6-202ENST00000542869 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
PTK6-202ENST00000542869 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
PTK6-202ENST00000542869 CLIP1P30622 1438 aa23.55■■□□□ 1.36
PTK6-202ENST00000542869 BCL11AQ9H165 835 aa23.54■■□□□ 1.36
PTK6-202ENST00000542869 APLP2Q06481 763 aa23.52■■□□□ 1.36
PTK6-202ENST00000542869 BCANQ96GW7 911 aa23.49■■□□□ 1.35
PTK6-202ENST00000542869 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
PTK6-202ENST00000542869 KCNH8Q96L42 1107 aa23.48■■□□□ 1.35
PTK6-202ENST00000542869 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
PTK6-202ENST00000542869 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
PTK6-202ENST00000542869 CC2D2AQ9P2K1 1620 aa23.42■■□□□ 1.34
PTK6-202ENST00000542869 TOP2BQ02880 1626 aa23.41■■□□□ 1.34
PTK6-202ENST00000542869 CFTRP13569 1480 aa23.4■■□□□ 1.34
PTK6-202ENST00000542869 KIF21BO75037 1637 aa23.36■■□□□ 1.33
PTK6-202ENST00000542869 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
PTK6-202ENST00000542869 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
PTK6-202ENST00000542869 CUX1P39880 1505 aa23.31■■□□□ 1.32
PTK6-202ENST00000542869 FKBP8Q14318 412 aa23.3■■□□□ 1.32
PTK6-202ENST00000542869 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
PTK6-202ENST00000542869 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
PTK6-202ENST00000542869 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
PTK6-202ENST00000542869 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
PTK6-202ENST00000542869 ITGAEP38570 1179 aa23.16■■□□□ 1.3
PTK6-202ENST00000542869 DDX10Q13206 875 aaKnown RBP23.1■■□□□ 1.29
PTK6-202ENST00000542869 KIF27Q86VH2 1401 aa23.07■■□□□ 1.28
PTK6-202ENST00000542869 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
PTK6-202ENST00000542869 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
PTK6-202ENST00000542869 TRIM52Q96A61 297 aa23.03■■□□□ 1.28
PTK6-202ENST00000542869 NESP48681 1621 aa23.03■■□□□ 1.28
PTK6-202ENST00000542869 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
PTK6-202ENST00000542869 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms