RNA–Protein interactions for RNA: ENST00000444100.2

PEX13-204, Transcript of peroxisomal biogenesis factor 13, humanhuman

TSL 1 (best) BASIC

Gene PEX13, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX13-204ENST00000444100 NISCHQ9Y2I1 1504 aa41.33■■■■■ 4.21
PEX13-204ENST00000444100 CCDC180Q9P1Z9 1646 aa36.4■■■■□ 3.42
PEX13-204ENST00000444100 ABCC9O60706 1549 aa35.52■■■■□ 3.28
PEX13-204ENST00000444100 DCAF8L2P0C7V8 631 aa34.75■■■■□ 3.15
PEX13-204ENST00000444100 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
PEX13-204ENST00000444100 NACADO15069 1562 aa34.23■■■■□ 3.07
PEX13-204ENST00000444100 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
PEX13-204ENST00000444100 DCAF1Q9Y4B6 1507 aa34.1■■■■□ 3.05
PEX13-204ENST00000444100 MYO15BQ96JP2 1530 aa34.06■■■■□ 3.04
PEX13-204ENST00000444100 SCRIBQ14160 1630 aa33.45■■■□□ 2.95
PEX13-204ENST00000444100 PABPN1Q86U42 306 aaKnown RBP eCLIP33.4■■■□□ 2.94
PEX13-204ENST00000444100 UNC13AQ9UPW8 1703 aa33.33■■■□□ 2.93
PEX13-204ENST00000444100 SHROOM4Q9ULL8 1493 aa33.17■■■□□ 2.9
PEX13-204ENST00000444100 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
PEX13-204ENST00000444100 DNAJC5BQ9UF47 199 aa32.31■■■□□ 2.76
PEX13-204ENST00000444100 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
PEX13-204ENST00000444100 CECR2Q9BXF3 1484 aa32.24■■■□□ 2.75
PEX13-204ENST00000444100 CC2D2AQ9P2K1 1620 aa32.03■■■□□ 2.72
PEX13-204ENST00000444100 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
PEX13-204ENST00000444100 SMARCA4P51532 1647 aa31.95■■■□□ 2.7
PEX13-204ENST00000444100 MROH2BQ7Z745 1585 aa31.91■■■□□ 2.7
PEX13-204ENST00000444100 ATAD2BQ9ULI0 1458 aa31.73■■■□□ 2.67
PEX13-204ENST00000444100 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
PEX13-204ENST00000444100 SMARCA2P51531 1590 aa31.65■■■□□ 2.66
PEX13-204ENST00000444100 NCAPD3P42695 1498 aa31.63■■■□□ 2.65
PEX13-204ENST00000444100 WIZO95785 1651 aa31.57■■■□□ 2.64
PEX13-204ENST00000444100 PEG3Q9GZU2 1588 aa31.55■■■□□ 2.64
PEX13-204ENST00000444100 BAZ1BQ9UIG0 1483 aaKnown RBP31.51■■■□□ 2.63
PEX13-204ENST00000444100 SUPT5HO00267 1087 aaKnown RBP31.47■■■□□ 2.63
PEX13-204ENST00000444100 HMGXB3Q12766 1538 aa31.43■■■□□ 2.62
PEX13-204ENST00000444100 TOP2AP11388 1531 aaKnown RBP31.2■■■□□ 2.59
PEX13-204ENST00000444100 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
PEX13-204ENST00000444100 NESP48681 1621 aa30.84■■■□□ 2.53
PEX13-204ENST00000444100 CADPSQ9ULU8 1353 aa30.8■■■□□ 2.52
PEX13-204ENST00000444100 LAMC3Q9Y6N6 1575 aa30.67■■■□□ 2.5
PEX13-204ENST00000444100 CFTRP13569 1480 aa30.64■■■□□ 2.49
PEX13-204ENST00000444100 ERCC6Q03468 1493 aa30.58■■■□□ 2.49
PEX13-204ENST00000444100 PDS5BQ9NTI5 1447 aa30.57■■■□□ 2.48
PEX13-204ENST00000444100 FANCD2Q9BXW9 1451 aa30.43■■■□□ 2.46
PEX13-204ENST00000444100 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
PEX13-204ENST00000444100 CEP164Q9UPV0 1460 aa30.33■■■□□ 2.45
PEX13-204ENST00000444100 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
PEX13-204ENST00000444100 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
PEX13-204ENST00000444100 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
PEX13-204ENST00000444100 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
PEX13-204ENST00000444100 WDR62O43379 1518 aa30.01■■■□□ 2.39
PEX13-204ENST00000444100 TOPBP1Q92547 1522 aa29.97■■■□□ 2.39
PEX13-204ENST00000444100 CUX2O14529 1486 aa29.96■■■□□ 2.39
PEX13-204ENST00000444100 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
PEX13-204ENST00000444100 DNMBPQ6XZF7 1577 aa29.91■■■□□ 2.38
PEX13-204ENST00000444100 WRNQ14191 1432 aaPredicted RBP eCLIP29.9■■■□□ 2.38
PEX13-204ENST00000444100 CUX1P39880 1505 aa29.89■■■□□ 2.38
PEX13-204ENST00000444100 FGD5Q6ZNL6 1462 aa29.75■■■□□ 2.35
PEX13-204ENST00000444100 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
PEX13-204ENST00000444100 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
PEX13-204ENST00000444100 SOGA1O94964 1423 aa29.71■■■□□ 2.35
PEX13-204ENST00000444100 RAD54L2Q9Y4B4 1467 aa29.69■■■□□ 2.34
PEX13-204ENST00000444100 TOP2BQ02880 1626 aa29.68■■■□□ 2.34
PEX13-204ENST00000444100 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
PEX13-204ENST00000444100 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
PEX13-204ENST00000444100 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
PEX13-204ENST00000444100 ZNF608Q9ULD9 1512 aaPredicted RBP29.56■■■□□ 2.32
PEX13-204ENST00000444100 TDRD9Q8NDG6 1382 aaKnown RBP29.55■■■□□ 2.32
PEX13-204ENST00000444100 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
PEX13-204ENST00000444100 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.32
PEX13-204ENST00000444100 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.31
PEX13-204ENST00000444100 ABCA10Q8WWZ4 1543 aa29.42■■■□□ 2.3
PEX13-204ENST00000444100 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
PEX13-204ENST00000444100 GAPVD1Q14C86 1478 aa29.33■■■□□ 2.29
PEX13-204ENST00000444100 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
PEX13-204ENST00000444100 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
PEX13-204ENST00000444100 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
PEX13-204ENST00000444100 FBLN2P98095 1184 aa29.21■■■□□ 2.27
PEX13-204ENST00000444100 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
PEX13-204ENST00000444100 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
PEX13-204ENST00000444100 RUSC2Q8N2Y8 1516 aa29.16■■■□□ 2.26
PEX13-204ENST00000444100 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
PEX13-204ENST00000444100 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
PEX13-204ENST00000444100 IGF1RP08069 1367 aa29.11■■■□□ 2.25
PEX13-204ENST00000444100 PBRM1Q86U86 1689 aa29.1■■■□□ 2.25
PEX13-204ENST00000444100 MAGI1Q96QZ7 1491 aaPredicted RBP29.07■■■□□ 2.24
PEX13-204ENST00000444100 ERICH3Q5RHP9 1530 aa29.06■■■□□ 2.24
PEX13-204ENST00000444100 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
PEX13-204ENST00000444100 SYNJ2O15056 1496 aa28.99■■■□□ 2.23
PEX13-204ENST00000444100 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
PEX13-204ENST00000444100 CSRNP3Q8WYN3 585 aa28.97■■■□□ 2.23
PEX13-204ENST00000444100 CARMIL1Q5VZK9 1371 aa28.96■■■□□ 2.23
PEX13-204ENST00000444100 ADAMTS12P58397 1594 aa28.93■■■□□ 2.22
PEX13-204ENST00000444100 EEA1Q15075 1411 aa28.89■■■□□ 2.22
PEX13-204ENST00000444100 CHD1O14646 1710 aa28.89■■■□□ 2.22
PEX13-204ENST00000444100 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
PEX13-204ENST00000444100 CUL7Q14999 1698 aa28.83■■■□□ 2.21
PEX13-204ENST00000444100 EHMT2Q96KQ7 1210 aa28.8■■■□□ 2.2
PEX13-204ENST00000444100 RAPGEF2Q9Y4G8 1499 aa28.77■■■□□ 2.2
PEX13-204ENST00000444100 DNAJC5Q9H3Z4 198 aa28.74■■■□□ 2.19
PEX13-204ENST00000444100 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
PEX13-204ENST00000444100 NUP160Q12769 1436 aa28.68■■■□□ 2.18
PEX13-204ENST00000444100 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
PEX13-204ENST00000444100 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
PEX13-204ENST00000444100 UBTFP17480 764 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms