RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
SYDE1-204ENST00000600440 HRCP23327 699 aa27.24■■□□□ 1.95
SYDE1-204ENST00000600440 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
SYDE1-204ENST00000600440 PPARGC1BQ86YN6 1023 aaKnown RBP27.04■■□□□ 1.92
SYDE1-204ENST00000600440 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
SYDE1-204ENST00000600440 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
SYDE1-204ENST00000600440 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
SYDE1-204ENST00000600440 PELP1Q8IZL8 1130 aaKnown RBP26.3■■□□□ 1.8
SYDE1-204ENST00000600440 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
SYDE1-204ENST00000600440 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
SYDE1-204ENST00000600440 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
SYDE1-204ENST00000600440 TRIM26Q12899 539 aaPredicted RBP25.73■■□□□ 1.71
SYDE1-204ENST00000600440 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
SYDE1-204ENST00000600440 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
SYDE1-204ENST00000600440 ZEB1P37275 1124 aaPredicted RBP25.45■■□□□ 1.66
SYDE1-204ENST00000600440 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.64
SYDE1-204ENST00000600440 CCDC180Q9P1Z9 1646 aa25.27■■□□□ 1.64
SYDE1-204ENST00000600440 NEUROD1Q13562 356 aa25.27■■□□□ 1.64
SYDE1-204ENST00000600440 ACIN1Q9UKV3 1341 aaKnown RBP25.22■■□□□ 1.63
SYDE1-204ENST00000600440 MYT1Q01538 1121 aa25.22■■□□□ 1.63
SYDE1-204ENST00000600440 GTF3C3Q9Y5Q9 886 aa25.21■■□□□ 1.63
SYDE1-204ENST00000600440 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.61
SYDE1-204ENST00000600440 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
SYDE1-204ENST00000600440 CENPBP07199 599 aaPredicted RBP24.95■■□□□ 1.59
SYDE1-204ENST00000600440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
SYDE1-204ENST00000600440 CCER1Q8TC90 406 aaPredicted RBP24.87■■□□□ 1.57
SYDE1-204ENST00000600440 DIEXFQ68CQ4 756 aaKnown RBP24.84■■□□□ 1.57
SYDE1-204ENST00000600440 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
SYDE1-204ENST00000600440 TRIM41Q8WV44 630 aa24.77■■□□□ 1.56
SYDE1-204ENST00000600440 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
SYDE1-204ENST00000600440 ZNF316A6NFI3 1004 aaPredicted RBP24.21■■□□□ 1.47
SYDE1-204ENST00000600440 MIER1Q8N108 512 aa24.21■■□□□ 1.47
SYDE1-204ENST00000600440 BCL11AQ9H165 835 aa23.97■■□□□ 1.43
SYDE1-204ENST00000600440 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
SYDE1-204ENST00000600440 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
SYDE1-204ENST00000600440 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
SYDE1-204ENST00000600440 ANP32EQ9BTT0 268 aa23.83■■□□□ 1.41
SYDE1-204ENST00000600440 SUPT16HQ9Y5B9 1047 aaKnown RBP23.82■■□□□ 1.4
SYDE1-204ENST00000600440 ABCC9O60706 1549 aa23.81■■□□□ 1.4
SYDE1-204ENST00000600440 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
SYDE1-204ENST00000600440 CSRNP3Q8WYN3 585 aa23.72■■□□□ 1.39
SYDE1-204ENST00000600440 BCANQ96GW7 911 aa23.7■■□□□ 1.39
SYDE1-204ENST00000600440 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
SYDE1-204ENST00000600440 SCRIBQ14160 1630 aa23.6■■□□□ 1.37
SYDE1-204ENST00000600440 CEP162Q5TB80 1403 aa23.53■■□□□ 1.36
SYDE1-204ENST00000600440 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
SYDE1-204ENST00000600440 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
SYDE1-204ENST00000600440 CLSPNQ9HAW4 1339 aa23.37■■□□□ 1.33
SYDE1-204ENST00000600440 FKBP8Q14318 412 aa23.34■■□□□ 1.33
SYDE1-204ENST00000600440 KCNH8Q96L42 1107 aa23.34■■□□□ 1.33
SYDE1-204ENST00000600440 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
SYDE1-204ENST00000600440 ITGAEP38570 1179 aa23.27■■□□□ 1.32
SYDE1-204ENST00000600440 SOGA1O94964 1423 aa23.25■■□□□ 1.31
SYDE1-204ENST00000600440 APLP2Q06481 763 aa23.25■■□□□ 1.31
SYDE1-204ENST00000600440 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
SYDE1-204ENST00000600440 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
SYDE1-204ENST00000600440 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
SYDE1-204ENST00000600440 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.31
SYDE1-204ENST00000600440 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.31
SYDE1-204ENST00000600440 WIZO95785 1651 aa23.15■■□□□ 1.3
SYDE1-204ENST00000600440 NEFLP07196 543 aa23.12■■□□□ 1.29
SYDE1-204ENST00000600440 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
SYDE1-204ENST00000600440 ERICH6Q7L0X2 663 aa23.08■■□□□ 1.29
SYDE1-204ENST00000600440 TRIM52Q96A61 297 aa23.02■■□□□ 1.28
SYDE1-204ENST00000600440 MSH5O43196 834 aa22.99■■□□□ 1.27
SYDE1-204ENST00000600440 PRKCSHP14314 528 aaPredicted RBP22.98■■□□□ 1.27
SYDE1-204ENST00000600440 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
SYDE1-204ENST00000600440 DHX57Q6P158 1386 aaKnown RBP22.93■■□□□ 1.26
SYDE1-204ENST00000600440 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
SYDE1-204ENST00000600440 CLIP1P30622 1438 aa22.89■■□□□ 1.26
SYDE1-204ENST00000600440 IRX6P78412 446 aaPredicted RBP22.88■■□□□ 1.25
SYDE1-204ENST00000600440 HIRIP3Q9BW71 556 aaPredicted RBP22.88■■□□□ 1.25
SYDE1-204ENST00000600440 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
SYDE1-204ENST00000600440 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
SYDE1-204ENST00000600440 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
SYDE1-204ENST00000600440 EEA1Q15075 1411 aa22.74■■□□□ 1.23
SYDE1-204ENST00000600440 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
SYDE1-204ENST00000600440 DEKP35659 375 aaKnown RBP22.71■■□□□ 1.23
SYDE1-204ENST00000600440 KANK4Q5T7N3 995 aaPredicted RBP22.69■■□□□ 1.22
SYDE1-204ENST00000600440 NBR1Q14596 966 aa22.67■■□□□ 1.22
SYDE1-204ENST00000600440 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
SYDE1-204ENST00000600440 ANP32CO43423 234 aa22.62■■□□□ 1.21
SYDE1-204ENST00000600440 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
SYDE1-204ENST00000600440 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
SYDE1-204ENST00000600440 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
SYDE1-204ENST00000600440 NACADO15069 1562 aa22.56■■□□□ 1.2
SYDE1-204ENST00000600440 HNRNPUQ00839 825 aaKnown RBP eCLIP22.55■■□□□ 1.2
SYDE1-204ENST00000600440 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
SYDE1-204ENST00000600440 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
SYDE1-204ENST00000600440 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
SYDE1-204ENST00000600440 KIF21BO75037 1637 aa22.46■■□□□ 1.19
SYDE1-204ENST00000600440 PPP1R15AO75807 674 aaPredicted RBP22.46■■□□□ 1.19
SYDE1-204ENST00000600440 RTN4Q9NQC3 1192 aaKnown RBP22.43■■□□□ 1.18
SYDE1-204ENST00000600440 CCDC136Q96JN2 1154 aa22.42■■□□□ 1.18
SYDE1-204ENST00000600440 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
SYDE1-204ENST00000600440 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
SYDE1-204ENST00000600440 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
SYDE1-204ENST00000600440 SALL2Q9Y467 1007 aaPredicted RBP22.38■■□□□ 1.17
SYDE1-204ENST00000600440 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
SYDE1-204ENST00000600440 CCNB3Q8WWL7 1395 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms