RNA–Protein interactions for RNA: ENST00000416469.6

SMIM19-202, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM19, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-202ENST00000416469 NISCHQ9Y2I1 1504 aa45.8■■■■■ 4.92
SMIM19-202ENST00000416469 CCDC180Q9P1Z9 1646 aa41.1■■■■■ 4.17
SMIM19-202ENST00000416469 ABCC9O60706 1549 aa40.83■■■■■ 4.13
SMIM19-202ENST00000416469 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
SMIM19-202ENST00000416469 NACADO15069 1562 aa38.77■■■■□ 3.8
SMIM19-202ENST00000416469 DCAF8L2P0C7V8 631 aa38.5■■■■□ 3.75
SMIM19-202ENST00000416469 MYO15BQ96JP2 1530 aa38.29■■■■□ 3.72
SMIM19-202ENST00000416469 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
SMIM19-202ENST00000416469 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
SMIM19-202ENST00000416469 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.67
SMIM19-202ENST00000416469 PABPN1Q86U42 306 aaKnown RBP eCLIP37.99■■■■□ 3.67
SMIM19-202ENST00000416469 DCAF1Q9Y4B6 1507 aa37.87■■■■□ 3.65
SMIM19-202ENST00000416469 BICRAQ9NZM4 1560 aa37.85■■■■□ 3.65
SMIM19-202ENST00000416469 SCRIBQ14160 1630 aa37.41■■■■□ 3.58
SMIM19-202ENST00000416469 SHROOM4Q9ULL8 1493 aa37.38■■■■□ 3.57
SMIM19-202ENST00000416469 CC2D2AQ9P2K1 1620 aa36.94■■■■□ 3.5
SMIM19-202ENST00000416469 EIF4G1Q04637 1599 aaKnown RBP36.9■■■■□ 3.5
SMIM19-202ENST00000416469 CECR2Q9BXF3 1484 aa36.77■■■■□ 3.48
SMIM19-202ENST00000416469 NCAPD3P42695 1498 aa35.75■■■■□ 3.31
SMIM19-202ENST00000416469 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
SMIM19-202ENST00000416469 ATAD2BQ9ULI0 1458 aa35.67■■■■□ 3.3
SMIM19-202ENST00000416469 SMARCA2P51531 1590 aa35.61■■■■□ 3.29
SMIM19-202ENST00000416469 BAZ1AQ9NRL2 1556 aaPredicted RBP35.56■■■■□ 3.28
SMIM19-202ENST00000416469 HMGXB3Q12766 1538 aa35.54■■■■□ 3.28
SMIM19-202ENST00000416469 PEG3Q9GZU2 1588 aa35.38■■■■□ 3.25
SMIM19-202ENST00000416469 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
SMIM19-202ENST00000416469 MROH2BQ7Z745 1585 aa35.29■■■■□ 3.24
SMIM19-202ENST00000416469 ERCC6Q03468 1493 aa35.25■■■■□ 3.23
SMIM19-202ENST00000416469 CUX2O14529 1486 aa35.15■■■■□ 3.22
SMIM19-202ENST00000416469 NESP48681 1621 aa35.14■■■■□ 3.22
SMIM19-202ENST00000416469 LAMC3Q9Y6N6 1575 aa34.96■■■■□ 3.19
SMIM19-202ENST00000416469 WIZO95785 1651 aa34.91■■■■□ 3.18
SMIM19-202ENST00000416469 DNAJC5Q9H3Z4 198 aa34.87■■■■□ 3.17
SMIM19-202ENST00000416469 THOC2Q8NI27 1593 aaKnown RBP34.8■■■■□ 3.16
SMIM19-202ENST00000416469 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.15
SMIM19-202ENST00000416469 PDS5BQ9NTI5 1447 aa34.71■■■■□ 3.15
SMIM19-202ENST00000416469 CADPSQ9ULU8 1353 aa34.66■■■■□ 3.14
SMIM19-202ENST00000416469 RSF1Q96T23 1441 aaPredicted RBP34.6■■■■□ 3.13
SMIM19-202ENST00000416469 TOP2AP11388 1531 aaKnown RBP34.47■■■■□ 3.11
SMIM19-202ENST00000416469 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
SMIM19-202ENST00000416469 WDR62O43379 1518 aa34.35■■■■□ 3.09
SMIM19-202ENST00000416469 CFTRP13569 1480 aa34.32■■■■□ 3.08
SMIM19-202ENST00000416469 CEP164Q9UPV0 1460 aa34.32■■■■□ 3.08
SMIM19-202ENST00000416469 FANCD2Q9BXW9 1451 aa34.28■■■■□ 3.08
SMIM19-202ENST00000416469 PRDM2Q13029 1718 aa34.12■■■■□ 3.05
SMIM19-202ENST00000416469 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
SMIM19-202ENST00000416469 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
SMIM19-202ENST00000416469 TOPBP1Q92547 1522 aa33.67■■■□□ 2.98
SMIM19-202ENST00000416469 IFT140Q96RY7 1462 aa33.63■■■□□ 2.97
SMIM19-202ENST00000416469 ABCC8Q09428 1581 aa33.61■■■□□ 2.97
SMIM19-202ENST00000416469 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
SMIM19-202ENST00000416469 ZNF608Q9ULD9 1512 aaPredicted RBP33.54■■■□□ 2.96
SMIM19-202ENST00000416469 OSCARQ8IYS5 282 aa33.52■■■□□ 2.96
SMIM19-202ENST00000416469 EIF4G3O43432 1585 aaKnown RBP33.41■■■□□ 2.94
SMIM19-202ENST00000416469 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
SMIM19-202ENST00000416469 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.93
SMIM19-202ENST00000416469 POLA1P09884 1462 aaPredicted RBP33.32■■■□□ 2.92
SMIM19-202ENST00000416469 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.91
SMIM19-202ENST00000416469 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
SMIM19-202ENST00000416469 CHD1O14646 1710 aa33.16■■■□□ 2.9
SMIM19-202ENST00000416469 SUPT5HO00267 1087 aaKnown RBP33.16■■■□□ 2.9
SMIM19-202ENST00000416469 SOGA1O94964 1423 aa33.16■■■□□ 2.9
SMIM19-202ENST00000416469 CUX1P39880 1505 aa33.15■■■□□ 2.9
SMIM19-202ENST00000416469 FGD5Q6ZNL6 1462 aa33.15■■■□□ 2.9
SMIM19-202ENST00000416469 RIMBP3CA6NJZ7 1639 aa33.14■■■□□ 2.9
SMIM19-202ENST00000416469 RIMBP3BA6NNM3 1639 aa33.14■■■□□ 2.9
SMIM19-202ENST00000416469 RIMBP3Q9UFD9 1639 aa33.14■■■□□ 2.9
SMIM19-202ENST00000416469 WDR97A6NE52 1622 aa33.08■■■□□ 2.89
SMIM19-202ENST00000416469 TDRD9Q8NDG6 1382 aaKnown RBP33.06■■■□□ 2.88
SMIM19-202ENST00000416469 ARHGEF11O15085 1522 aa33.03■■■□□ 2.88
SMIM19-202ENST00000416469 FBLN2P98095 1184 aa32.96■■■□□ 2.87
SMIM19-202ENST00000416469 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
SMIM19-202ENST00000416469 GRIN2BQ13224 1484 aa32.87■■■□□ 2.85
SMIM19-202ENST00000416469 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
SMIM19-202ENST00000416469 PBRM1Q86U86 1689 aa32.83■■■□□ 2.85
SMIM19-202ENST00000416469 ABCA10Q8WWZ4 1543 aa32.79■■■□□ 2.84
SMIM19-202ENST00000416469 GAPVD1Q14C86 1478 aa32.77■■■□□ 2.84
SMIM19-202ENST00000416469 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
SMIM19-202ENST00000416469 CHMP7Q8WUX9 453 aaPredicted RBP32.75■■■□□ 2.83
SMIM19-202ENST00000416469 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
SMIM19-202ENST00000416469 SYNJ2O15056 1496 aa32.74■■■□□ 2.83
SMIM19-202ENST00000416469 CLASP1Q7Z460 1538 aa32.74■■■□□ 2.83
SMIM19-202ENST00000416469 BIVM-ERCC5R4GMW8 1640 aa32.72■■■□□ 2.83
SMIM19-202ENST00000416469 CYB5RLQ6IPT4 315 aa32.71■■■□□ 2.83
SMIM19-202ENST00000416469 ARAP1Q96P48 1450 aa32.71■■■□□ 2.83
SMIM19-202ENST00000416469 TOP2BQ02880 1626 aa32.69■■■□□ 2.82
SMIM19-202ENST00000416469 WRNQ14191 1432 aaPredicted RBP eCLIP32.67■■■□□ 2.82
SMIM19-202ENST00000416469 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
SMIM19-202ENST00000416469 GRIN2AQ12879 1464 aa32.45■■■□□ 2.79
SMIM19-202ENST00000416469 ERICH3Q5RHP9 1530 aa32.39■■■□□ 2.78
SMIM19-202ENST00000416469 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
SMIM19-202ENST00000416469 CEP170Q5SW79 1584 aa32.35■■■□□ 2.77
SMIM19-202ENST00000416469 NUP160Q12769 1436 aa32.34■■■□□ 2.77
SMIM19-202ENST00000416469 TRHP20396 242 aaPredicted RBP32.28■■■□□ 2.76
SMIM19-202ENST00000416469 ERCC6L2Q5T890 1561 aa32.23■■■□□ 2.75
SMIM19-202ENST00000416469 SHROOM2Q13796 1616 aa32.22■■■□□ 2.75
SMIM19-202ENST00000416469 RUSC2Q8N2Y8 1516 aa32.04■■■□□ 2.72
SMIM19-202ENST00000416469 KIF27Q86VH2 1401 aa32.01■■■□□ 2.72
SMIM19-202ENST00000416469 PRG4Q92954 1404 aaPredicted RBP31.99■■■□□ 2.71
SMIM19-202ENST00000416469 CUL7Q14999 1698 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms