RNA–Protein interactions for RNA: ENST00000389744.8

KLC1-206, Transcript of kinesin light chain 1, humanhuman

TSL 1 (best) BASIC

Gene KLC1, Length 3,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-206ENST00000389744 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
KLC1-206ENST00000389744 SHROOM4Q9ULL8 1493 aa29.38■■■□□ 2.29
KLC1-206ENST00000389744 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
KLC1-206ENST00000389744 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
KLC1-206ENST00000389744 PCGF6Q9BYE7 350 aa27.62■■■□□ 2.01
KLC1-206ENST00000389744 CHIC1Q5VXU3 224 aa27.58■■■□□ 2
KLC1-206ENST00000389744 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
KLC1-206ENST00000389744 EHMT2Q96KQ7 1210 aa27.4■■□□□ 1.98
KLC1-206ENST00000389744 LOC105371045A0A1W2PR82 267 aa27.38■■□□□ 1.97
KLC1-206ENST00000389744 PPARGC1BQ86YN6 1023 aaKnown RBP27.34■■□□□ 1.97
KLC1-206ENST00000389744 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
KLC1-206ENST00000389744 HRCP23327 699 aa27.15■■□□□ 1.94
KLC1-206ENST00000389744 FAM9AQ8IZU1 332 aaPredicted RBP27.04■■□□□ 1.92
KLC1-206ENST00000389744 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
KLC1-206ENST00000389744 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
KLC1-206ENST00000389744 TTBK1Q5TCY1 1321 aaPredicted RBP26.44■■□□□ 1.82
KLC1-206ENST00000389744 TRIM26Q12899 539 aaPredicted RBP26.36■■□□□ 1.81
KLC1-206ENST00000389744 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
KLC1-206ENST00000389744 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
KLC1-206ENST00000389744 ABCC9O60706 1549 aa26.01■■□□□ 1.75
KLC1-206ENST00000389744 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
KLC1-206ENST00000389744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.91■■□□□ 1.74
KLC1-206ENST00000389744 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
KLC1-206ENST00000389744 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
KLC1-206ENST00000389744 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
KLC1-206ENST00000389744 RANGAP1P46060 587 aaPredicted RBP25.67■■□□□ 1.7
KLC1-206ENST00000389744 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
KLC1-206ENST00000389744 SCAF1Q9H7N4 1312 aaKnown RBP25.47■■□□□ 1.67
KLC1-206ENST00000389744 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
KLC1-206ENST00000389744 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
KLC1-206ENST00000389744 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
KLC1-206ENST00000389744 WIZO95785 1651 aa25.31■■□□□ 1.64
KLC1-206ENST00000389744 YTHDC1Q96MU7 727 aaKnown RBP25.3■■□□□ 1.64
KLC1-206ENST00000389744 HNRNPUL2Q1KMD3 747 aaKnown RBP25.25■■□□□ 1.63
KLC1-206ENST00000389744 ABCC8Q09428 1581 aa25.17■■□□□ 1.62
KLC1-206ENST00000389744 NEUROD1Q13562 356 aa25.17■■□□□ 1.62
KLC1-206ENST00000389744 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
KLC1-206ENST00000389744 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
KLC1-206ENST00000389744 SOGA1O94964 1423 aa25.09■■□□□ 1.61
KLC1-206ENST00000389744 GTF3C3Q9Y5Q9 886 aa25.03■■□□□ 1.6
KLC1-206ENST00000389744 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
KLC1-206ENST00000389744 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
KLC1-206ENST00000389744 ACIN1Q9UKV3 1341 aaKnown RBP24.95■■□□□ 1.58
KLC1-206ENST00000389744 CEP162Q5TB80 1403 aa24.92■■□□□ 1.58
KLC1-206ENST00000389744 NACADO15069 1562 aa24.91■■□□□ 1.58
KLC1-206ENST00000389744 APLP2Q06481 763 aa24.83■■□□□ 1.56
KLC1-206ENST00000389744 CENPBP07199 599 aaPredicted RBP24.8■■□□□ 1.56
KLC1-206ENST00000389744 ITGAEP38570 1179 aa24.75■■□□□ 1.55
KLC1-206ENST00000389744 BAZ1AQ9NRL2 1556 aaPredicted RBP24.72■■□□□ 1.55
KLC1-206ENST00000389744 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
KLC1-206ENST00000389744 MIER1Q8N108 512 aa24.67■■□□□ 1.54
KLC1-206ENST00000389744 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.53
KLC1-206ENST00000389744 PELP1Q8IZL8 1130 aaKnown RBP24.54■■□□□ 1.52
KLC1-206ENST00000389744 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
KLC1-206ENST00000389744 TOP2AP11388 1531 aaKnown RBP24.52■■□□□ 1.52
KLC1-206ENST00000389744 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
KLC1-206ENST00000389744 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
KLC1-206ENST00000389744 ATP1B4Q9UN42 357 aaPredicted RBP24.45■■□□□ 1.51
KLC1-206ENST00000389744 CLIP1P30622 1438 aa24.45■■□□□ 1.5
KLC1-206ENST00000389744 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
KLC1-206ENST00000389744 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
KLC1-206ENST00000389744 KANK4Q5T7N3 995 aaPredicted RBP24.33■■□□□ 1.49
KLC1-206ENST00000389744 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
KLC1-206ENST00000389744 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
KLC1-206ENST00000389744 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
KLC1-206ENST00000389744 EEA1Q15075 1411 aa24.18■■□□□ 1.46
KLC1-206ENST00000389744 CEP164Q9UPV0 1460 aa24.18■■□□□ 1.46
KLC1-206ENST00000389744 HIRIP3Q9BW71 556 aaPredicted RBP24.17■■□□□ 1.46
KLC1-206ENST00000389744 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.45
KLC1-206ENST00000389744 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
KLC1-206ENST00000389744 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
KLC1-206ENST00000389744 BCANQ96GW7 911 aa24.1■■□□□ 1.45
KLC1-206ENST00000389744 KCNH8Q96L42 1107 aa24.09■■□□□ 1.45
KLC1-206ENST00000389744 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.44
KLC1-206ENST00000389744 ATAD2BQ9ULI0 1458 aa24.04■■□□□ 1.44
KLC1-206ENST00000389744 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
KLC1-206ENST00000389744 SIN3AQ96ST3 1273 aa23.94■■□□□ 1.42
KLC1-206ENST00000389744 KIF21BO75037 1637 aa23.92■■□□□ 1.42
KLC1-206ENST00000389744 DHX57Q6P158 1386 aaKnown RBP23.91■■□□□ 1.42
KLC1-206ENST00000389744 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
KLC1-206ENST00000389744 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
KLC1-206ENST00000389744 ARID3CA6NKF2 412 aa23.79■■□□□ 1.4
KLC1-206ENST00000389744 SUPT16HQ9Y5B9 1047 aaKnown RBP23.78■■□□□ 1.4
KLC1-206ENST00000389744 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
KLC1-206ENST00000389744 CNGB1Q14028 1251 aaPredicted RBP23.74■■□□□ 1.39
KLC1-206ENST00000389744 CCNB3Q8WWL7 1395 aa23.71■■□□□ 1.39
KLC1-206ENST00000389744 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
KLC1-206ENST00000389744 RAB3GAP2Q9H2M9 1393 aa23.67■■□□□ 1.38
KLC1-206ENST00000389744 CUX2O14529 1486 aa23.63■■□□□ 1.37
KLC1-206ENST00000389744 FKBP8Q14318 412 aa23.63■■□□□ 1.37
KLC1-206ENST00000389744 CUX1P39880 1505 aa23.59■■□□□ 1.37
KLC1-206ENST00000389744 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
KLC1-206ENST00000389744 TOP2BQ02880 1626 aa23.55■■□□□ 1.36
KLC1-206ENST00000389744 ARHGAP35Q9NRY4 1499 aa23.55■■□□□ 1.36
KLC1-206ENST00000389744 CHIC2Q9UKJ5 165 aa23.53■■□□□ 1.36
KLC1-206ENST00000389744 IRX6P78412 446 aaPredicted RBP23.53■■□□□ 1.36
KLC1-206ENST00000389744 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
KLC1-206ENST00000389744 SENP3-EIF4A1A0A087X0R7 540 aa23.5■■□□□ 1.35
KLC1-206ENST00000389744 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
KLC1-206ENST00000389744 PHLDB1Q86UU1 1377 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms