RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 NISCHQ9Y2I1 1504 aa38.87■■■■□ 3.81
CSNK2A1-203ENST00000400217 CCDC180Q9P1Z9 1646 aa33.93■■■■□ 3.02
CSNK2A1-203ENST00000400217 ZCCHC6Q5VYS8 1495 aaKnown RBP32.62■■■□□ 2.81
CSNK2A1-203ENST00000400217 ABCC9O60706 1549 aa32.19■■■□□ 2.74
CSNK2A1-203ENST00000400217 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
CSNK2A1-203ENST00000400217 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
CSNK2A1-203ENST00000400217 MYO15BQ96JP2 1530 aa31.82■■■□□ 2.68
CSNK2A1-203ENST00000400217 NACADO15069 1562 aa31.66■■■□□ 2.66
CSNK2A1-203ENST00000400217 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
CSNK2A1-203ENST00000400217 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
CSNK2A1-203ENST00000400217 SCRIBQ14160 1630 aa31.17■■■□□ 2.58
CSNK2A1-203ENST00000400217 UNC13AQ9UPW8 1703 aa30.72■■■□□ 2.51
CSNK2A1-203ENST00000400217 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
CSNK2A1-203ENST00000400217 SUPT5HO00267 1087 aaKnown RBP30.4■■■□□ 2.46
CSNK2A1-203ENST00000400217 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
CSNK2A1-203ENST00000400217 CECR2Q9BXF3 1484 aa30.21■■■□□ 2.43
CSNK2A1-203ENST00000400217 RSF1Q96T23 1441 aaPredicted RBP30.12■■■□□ 2.41
CSNK2A1-203ENST00000400217 MROH2BQ7Z745 1585 aa30.02■■■□□ 2.4
CSNK2A1-203ENST00000400217 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
CSNK2A1-203ENST00000400217 SMARCA4P51532 1647 aa29.89■■■□□ 2.38
CSNK2A1-203ENST00000400217 WIZO95785 1651 aa29.75■■■□□ 2.35
CSNK2A1-203ENST00000400217 PEG3Q9GZU2 1588 aa29.54■■■□□ 2.32
CSNK2A1-203ENST00000400217 EIF4G1Q04637 1599 aaKnown RBP29.53■■■□□ 2.32
CSNK2A1-203ENST00000400217 TOP2AP11388 1531 aaKnown RBP29.46■■■□□ 2.31
CSNK2A1-203ENST00000400217 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
CSNK2A1-203ENST00000400217 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
CSNK2A1-203ENST00000400217 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
CSNK2A1-203ENST00000400217 NCAPD3P42695 1498 aa29.23■■■□□ 2.27
CSNK2A1-203ENST00000400217 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
CSNK2A1-203ENST00000400217 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
CSNK2A1-203ENST00000400217 CC2D2AQ9P2K1 1620 aa29.13■■■□□ 2.25
CSNK2A1-203ENST00000400217 CHIC1Q5VXU3 224 aa29.06■■■□□ 2.24
CSNK2A1-203ENST00000400217 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
CSNK2A1-203ENST00000400217 CFTRP13569 1480 aa28.54■■■□□ 2.16
CSNK2A1-203ENST00000400217 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
CSNK2A1-203ENST00000400217 ABCC8Q09428 1581 aa28.49■■■□□ 2.15
CSNK2A1-203ENST00000400217 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
CSNK2A1-203ENST00000400217 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
CSNK2A1-203ENST00000400217 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
CSNK2A1-203ENST00000400217 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
CSNK2A1-203ENST00000400217 NESP48681 1621 aa28.22■■■□□ 2.11
CSNK2A1-203ENST00000400217 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
CSNK2A1-203ENST00000400217 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
CSNK2A1-203ENST00000400217 TOP2BQ02880 1626 aa28.13■■■□□ 2.09
CSNK2A1-203ENST00000400217 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
CSNK2A1-203ENST00000400217 CUX1P39880 1505 aa28.08■■■□□ 2.09
CSNK2A1-203ENST00000400217 FAM9AQ8IZU1 332 aaPredicted RBP28.06■■■□□ 2.08
CSNK2A1-203ENST00000400217 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
CSNK2A1-203ENST00000400217 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
CSNK2A1-203ENST00000400217 SOGA1O94964 1423 aa27.96■■■□□ 2.07
CSNK2A1-203ENST00000400217 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
CSNK2A1-203ENST00000400217 EEA1Q15075 1411 aa27.91■■■□□ 2.06
CSNK2A1-203ENST00000400217 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
CSNK2A1-203ENST00000400217 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
CSNK2A1-203ENST00000400217 RUSC2Q8N2Y8 1516 aa27.85■■■□□ 2.05
CSNK2A1-203ENST00000400217 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
CSNK2A1-203ENST00000400217 CSRNP3Q8WYN3 585 aa27.79■■■□□ 2.04
CSNK2A1-203ENST00000400217 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
CSNK2A1-203ENST00000400217 URB2Q14146 1524 aaKnown RBP27.79■■■□□ 2.04
CSNK2A1-203ENST00000400217 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
CSNK2A1-203ENST00000400217 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
CSNK2A1-203ENST00000400217 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
CSNK2A1-203ENST00000400217 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
CSNK2A1-203ENST00000400217 ERCC6Q03468 1493 aa27.62■■■□□ 2.01
CSNK2A1-203ENST00000400217 CUX2O14529 1486 aa27.6■■■□□ 2.01
CSNK2A1-203ENST00000400217 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
CSNK2A1-203ENST00000400217 ABCA10Q8WWZ4 1543 aa27.56■■■□□ 2
CSNK2A1-203ENST00000400217 KIF21BO75037 1637 aa27.52■■■□□ 2
CSNK2A1-203ENST00000400217 WDR62O43379 1518 aa27.51■■□□□ 1.99
CSNK2A1-203ENST00000400217 GOLGA3Q08378 1498 aa27.5■■□□□ 1.99
CSNK2A1-203ENST00000400217 IGF1RP08069 1367 aa27.44■■□□□ 1.98
CSNK2A1-203ENST00000400217 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
CSNK2A1-203ENST00000400217 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
CSNK2A1-203ENST00000400217 WDR97A6NE52 1622 aa27.43■■□□□ 1.98
CSNK2A1-203ENST00000400217 TNIKQ9UKE5 1360 aa27.42■■□□□ 1.98
CSNK2A1-203ENST00000400217 UBTFP17480 764 aaKnown RBP27.42■■□□□ 1.98
CSNK2A1-203ENST00000400217 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
CSNK2A1-203ENST00000400217 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
CSNK2A1-203ENST00000400217 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
CSNK2A1-203ENST00000400217 TDRD9Q8NDG6 1382 aaKnown RBP27.34■■□□□ 1.97
CSNK2A1-203ENST00000400217 IFT140Q96RY7 1462 aa27.33■■□□□ 1.96
CSNK2A1-203ENST00000400217 ABCA5Q8WWZ7 1642 aa27.31■■□□□ 1.96
CSNK2A1-203ENST00000400217 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
CSNK2A1-203ENST00000400217 GAPVD1Q14C86 1478 aa27.3■■□□□ 1.96
CSNK2A1-203ENST00000400217 CEP162Q5TB80 1403 aa27.23■■□□□ 1.95
CSNK2A1-203ENST00000400217 CUL7Q14999 1698 aa27.19■■□□□ 1.94
CSNK2A1-203ENST00000400217 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.949e-8■■■□□ 18.2
CSNK2A1-203ENST00000400217 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
CSNK2A1-203ENST00000400217 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
CSNK2A1-203ENST00000400217 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
CSNK2A1-203ENST00000400217 CLIP1P30622 1438 aa27.06■■□□□ 1.92
CSNK2A1-203ENST00000400217 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
CSNK2A1-203ENST00000400217 FHAD1B1AJZ9 1412 aa27.01■■□□□ 1.91
CSNK2A1-203ENST00000400217 RANGAP1P46060 587 aaPredicted RBP26.97■■□□□ 1.91
CSNK2A1-203ENST00000400217 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
CSNK2A1-203ENST00000400217 SNAPC4Q5SXM2 1469 aa26.91■■□□□ 1.9
CSNK2A1-203ENST00000400217 MAGI1Q96QZ7 1491 aaPredicted RBP26.88■■□□□ 1.89
CSNK2A1-203ENST00000400217 CTTNBP2Q8WZ74 1663 aa26.86■■□□□ 1.89
CSNK2A1-203ENST00000400217 ARHGAP35Q9NRY4 1499 aa26.82■■□□□ 1.88
CSNK2A1-203ENST00000400217 VPS8Q8N3P4 1428 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms