RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 DCAF8L2P0C7V8 631 aa27.42■■□□□ 1.98
TNXB-209ENST00000613214 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.73
TNXB-209ENST00000613214 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
TNXB-209ENST00000613214 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
TNXB-209ENST00000613214 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.58
TNXB-209ENST00000613214 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
TNXB-209ENST00000613214 PELP1Q8IZL8 1130 aaKnown RBP24.42■■□□□ 1.5
TNXB-209ENST00000613214 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
TNXB-209ENST00000613214 APLP2Q06481 763 aa24.39■■□□□ 1.5
TNXB-209ENST00000613214 ATP1B4Q9UN42 357 aaPredicted RBP24.23■■□□□ 1.47
TNXB-209ENST00000613214 ERICH6Q7L0X2 663 aa24.04■■□□□ 1.44
TNXB-209ENST00000613214 PCGF6Q9BYE7 350 aa24.01■■□□□ 1.43
TNXB-209ENST00000613214 YTHDC1Q96MU7 727 aaKnown RBP23.65■■□□□ 1.38
TNXB-209ENST00000613214 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
TNXB-209ENST00000613214 MYT1Q01538 1121 aa23.53■■□□□ 1.36
TNXB-209ENST00000613214 CCER1Q8TC90 406 aaPredicted RBP23.52■■□□□ 1.36
TNXB-209ENST00000613214 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
TNXB-209ENST00000613214 MYT1LQ9UL68 1186 aa23.48■■□□□ 1.35
TNXB-209ENST00000613214 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
TNXB-209ENST00000613214 POLR3GLQ9BT43 218 aa23.4■■□□□ 1.34
TNXB-209ENST00000613214 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
TNXB-209ENST00000613214 CENPBP07199 599 aaPredicted RBP23.27■■□□□ 1.32
TNXB-209ENST00000613214 TRIM41Q8WV44 630 aa23.2■■□□□ 1.3
TNXB-209ENST00000613214 NEFLP07196 543 aa23.19■■□□□ 1.3
TNXB-209ENST00000613214 ITGAEP38570 1179 aa23.15■■□□□ 1.3
TNXB-209ENST00000613214 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
TNXB-209ENST00000613214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
TNXB-209ENST00000613214 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
TNXB-209ENST00000613214 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
TNXB-209ENST00000613214 DAXXQ9UER7 740 aaPredicted RBP22.9■■□□□ 1.26
TNXB-209ENST00000613214 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
TNXB-209ENST00000613214 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
TNXB-209ENST00000613214 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.19
TNXB-209ENST00000613214 SLC24A1O60721 1099 aa22.51■■□□□ 1.19
TNXB-209ENST00000613214 ZNF316A6NFI3 1004 aaPredicted RBP22.38■■□□□ 1.17
TNXB-209ENST00000613214 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
TNXB-209ENST00000613214 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
TNXB-209ENST00000613214 ZNF326Q5BKZ1 582 aaKnown RBP22.2■■□□□ 1.15
TNXB-209ENST00000613214 FAM50AQ14320 339 aaKnown RBP22.2■■□□□ 1.14
TNXB-209ENST00000613214 BCANQ96GW7 911 aa22.19■■□□□ 1.14
TNXB-209ENST00000613214 TRIM52Q96A61 297 aa22.17■■□□□ 1.14
TNXB-209ENST00000613214 NEUROD1Q13562 356 aa22.16■■□□□ 1.14
TNXB-209ENST00000613214 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
TNXB-209ENST00000613214 HRCP23327 699 aa22.08■■□□□ 1.13
TNXB-209ENST00000613214 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
TNXB-209ENST00000613214 FBLN2P98095 1184 aa22.06■■□□□ 1.12
TNXB-209ENST00000613214 ARID3CA6NKF2 412 aa22.03■■□□□ 1.12
TNXB-209ENST00000613214 ZBTB47Q9UFB7 747 aaPredicted RBP21.93■■□□□ 1.1
TNXB-209ENST00000613214 CANXP27824 592 aaKnown RBP21.85■■□□□ 1.09
TNXB-209ENST00000613214 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
TNXB-209ENST00000613214 DIEXFQ68CQ4 756 aaKnown RBP21.76■■□□□ 1.07
TNXB-209ENST00000613214 PLEKHG5O94827 1062 aa21.7■■□□□ 1.06
TNXB-209ENST00000613214 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
TNXB-209ENST00000613214 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
TNXB-209ENST00000613214 NPM2Q86SE8 214 aaKnown RBP21.66■■□□□ 1.06
TNXB-209ENST00000613214 A0A0G2JS52 829 aa21.63■■□□□ 1.05
TNXB-209ENST00000613214 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
TNXB-209ENST00000613214 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
TNXB-209ENST00000613214 CHGAP10645 457 aaKnown RBP21.56■■□□□ 1.04
TNXB-209ENST00000613214 NEFMP07197 916 aa21.54■■□□□ 1.04
TNXB-209ENST00000613214 ANP32CO43423 234 aa21.53■■□□□ 1.04
TNXB-209ENST00000613214 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
TNXB-209ENST00000613214 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
TNXB-209ENST00000613214 STAG3Q9UJ98 1225 aa21.45■■□□□ 1.02
TNXB-209ENST00000613214 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
TNXB-209ENST00000613214 ESF1Q9H501 851 aaKnown RBP21.43■■□□□ 1.02
TNXB-209ENST00000613214 ARXQ96QS3 562 aa21.42■■□□□ 1.02
TNXB-209ENST00000613214 ZBTB7CA1YPR0 619 aa21.4■■□□□ 1.02
TNXB-209ENST00000613214 HSP90AA1P07900 732 aaKnown RBP21.3■■□□□ 1
TNXB-209ENST00000613214 EIF5BO60841 1220 aaKnown RBP21.29■■□□□ 1
TNXB-209ENST00000613214 ABCC9O60706 1549 aa21.26■□□□□ 0.99
TNXB-209ENST00000613214 TULP1O00294 542 aaPredicted RBP21.25■□□□□ 0.99
TNXB-209ENST00000613214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.98
TNXB-209ENST00000613214 ANP32AP39687 249 aaKnown RBP21.16■□□□□ 0.98
TNXB-209ENST00000613214 C14orf37Q86TY3 774 aa21.13■□□□□ 0.97
TNXB-209ENST00000613214 FAM9BQ8IZU0 186 aa21.13■□□□□ 0.97
TNXB-209ENST00000613214 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
TNXB-209ENST00000613214 TPRNQ4KMQ1 711 aa21.09■□□□□ 0.97
TNXB-209ENST00000613214 NBR1Q14596 966 aa21.05■□□□□ 0.96
TNXB-209ENST00000613214 ANP32BQ92688 251 aaKnown RBP21.04■□□□□ 0.96
TNXB-209ENST00000613214 TAOK2Q9UL54 1235 aa21.04■□□□□ 0.96
TNXB-209ENST00000613214 FKBP8Q14318 412 aa21.02■□□□□ 0.96
TNXB-209ENST00000613214 KDM2AQ9Y2K7 1162 aa21.01■□□□□ 0.95
TNXB-209ENST00000613214 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
TNXB-209ENST00000613214 IRX6P78412 446 aaPredicted RBP20.95■□□□□ 0.94
TNXB-209ENST00000613214 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
TNXB-209ENST00000613214 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
TNXB-209ENST00000613214 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
TNXB-209ENST00000613214 HIRIP3Q9BW71 556 aaPredicted RBP20.9■□□□□ 0.94
TNXB-209ENST00000613214 CDK11BP21127 795 aaKnown RBP20.89■□□□□ 0.93
TNXB-209ENST00000613214 UPF2Q9HAU5 1272 aaKnown RBP20.88■□□□□ 0.93
TNXB-209ENST00000613214 DDX10Q13206 875 aaKnown RBP20.88■□□□□ 0.93
TNXB-209ENST00000613214 HAP1P54257 671 aaPredicted RBP20.86■□□□□ 0.93
TNXB-209ENST00000613214 WDR43Q15061 677 aaKnown RBP eCLIP20.78■□□□□ 0.92
TNXB-209ENST00000613214 TMC1Q8TDI8 760 aa20.75■□□□□ 0.91
TNXB-209ENST00000613214 TONSLQ96HA7 1378 aa20.75■□□□□ 0.91
TNXB-209ENST00000613214 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
TNXB-209ENST00000613214 ARID4BQ4LE39 1312 aaPredicted RBP20.72■□□□□ 0.91
TNXB-209ENST00000613214 LMOD2Q6P5Q4 547 aa20.72■□□□□ 0.91
TNXB-209ENST00000613214 CCDC136Q96JN2 1154 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms