Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.682e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.242e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-215ENST00000576917 1958 ntTSL 515.93■□□□□ 0.142e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-205ENST00000572105 1168 ntTSL 515.15■□□□□ 0.022e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-203ENST00000571691 761 ntTSL 315□□□□□ -0.012e-8■■□□□ 12.6
GTF2F1P35269 WNK4-204ENST00000591448 3909 ntTSL 1 (best)14.67□□□□□ -0.062e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-202ENST00000570382 471 ntTSL 414.3□□□□□ -0.122e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-213ENST00000576214 1024 ntTSL 514.3□□□□□ -0.122e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-211ENST00000575994 856 ntTSL 314.27□□□□□ -0.132e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.22e-8■■□□□ 12.6
GTF2F1P35269 WNK4-201ENST00000246914 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.242e-8■■□□□ 12.6
GTF2F1P35269 ACTG1-214ENST00000576544 1720 ntTSL 513.31□□□□□ -0.282e-8■■□□□ 12.6
GTF2F1P35269 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.492e-8■■□□□ 12.5
GTF2F1P35269 ANXA4-204ENST00000460439 543 ntTSL 414.87□□□□□ -0.032e-8■■□□□ 12.5
GTF2F1P35269 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.072e-8■■□□□ 12.5
GTF2F1P35269 ANXA4-212ENST00000635311 1492 ntTSL 214.26□□□□□ -0.132e-8■■□□□ 12.5
GTF2F1P35269 ANXA4-211ENST00000487351 552 ntTSL 214.14□□□□□ -0.152e-8■■□□□ 12.5
GTF2F1P35269 ANXA4-205ENST00000460942 576 ntTSL 513.51□□□□□ -0.252e-8■■□□□ 12.5
GTF2F1P35269 ANXA4-209ENST00000477632 3949 ntTSL 1 (best)10.07□□□□□ -0.82e-8■■□□□ 12.5
GTF2F1P35269 ANXA4-203ENST00000418066 905 ntTSL 37.57□□□□□ -1.22e-8■■□□□ 12.5
GTF2F1P35269 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.97e-7■■□□□ 12.5
GTF2F1P35269 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.267e-7■■□□□ 12.5
GTF2F1P35269 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.487e-7■■□□□ 12.5
GTF2F1P35269 MLXIPL-208ENST00000456640 706 ntTSL 518.73■□□□□ 0.595e-7■■□□□ 12.5
GTF2F1P35269 SORT1-203ENST00000471996 469 ntTSL 322.18■■□□□ 1.141e-8■■□□□ 12.5
GTF2F1P35269 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.571e-8■■□□□ 12.5
GTF2F1P35269 SORT1-204ENST00000482236 615 ntTSL 312.43□□□□□ -0.421e-8■■□□□ 12.5
GTF2F1P35269 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.06□□□□□ -1.121e-8■■□□□ 12.5
GTF2F1P35269 SORT1-210ENST00000633956 561 ntTSL 45.9□□□□□ -1.461e-8■■□□□ 12.5
GTF2F1P35269 NT5DC2-213ENST00000489316 772 ntTSL 517.38■□□□□ 0.372e-7■■□□□ 12.5
GTF2F1P35269 PGGHG-207ENST00000482937 734 ntTSL 517.71■□□□□ 0.435e-7■■□□□ 12.5
GTF2F1P35269 AC009065.4-202ENST00000567888 274 ntTSL 527.5■■□□□ 1.992e-7■■□□□ 12.5
GTF2F1P35269 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.58■■□□□ 1.052e-7■■□□□ 12.5
GTF2F1P35269 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.89■□□□□ 0.932e-7■■□□□ 12.5
GTF2F1P35269 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18■□□□□ 0.472e-7■■□□□ 12.5
GTF2F1P35269 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.5■□□□□ 0.232e-7■■□□□ 12.5
GTF2F1P35269 MECP2-211ENST00000496908 342 ntTSL 1 (best)15.59■□□□□ 0.092e-7■■□□□ 12.5
GTF2F1P35269 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.52□□□□□ -0.092e-7■■□□□ 12.5
GTF2F1P35269 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.36□□□□□ -0.112e-7■■□□□ 12.5
GTF2F1P35269 MECP2-226ENST00000640414 897 ntTSL 5 BASIC13.51□□□□□ -0.252e-7■■□□□ 12.5
GTF2F1P35269 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.252e-7■■□□□ 12.5
GTF2F1P35269 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.282e-7■■□□□ 12.5
GTF2F1P35269 CIZ1-223ENST00000491954 955 ntTSL 313.27□□□□□ -0.292e-7■■□□□ 12.5
GTF2F1P35269 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.372e-7■■□□□ 12.5
GTF2F1P35269 CIZ1-208ENST00000415526 2508 ntAPPRIS ALT2 TSL 1 (best)12.42□□□□□ -0.422e-7■■□□□ 12.5
GTF2F1P35269 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.52e-7■■□□□ 12.5
GTF2F1P35269 MECP2-212ENST00000611468 603 ntTSL 5 BASIC11.63□□□□□ -0.552e-7■■□□□ 12.5
GTF2F1P35269 MECP2-202ENST00000369957 784 ntTSL 310.6□□□□□ -0.712e-7■■□□□ 12.5
GTF2F1P35269 CIZ1-224ENST00000498156 642 ntTSL 510.06□□□□□ -0.82e-7■■□□□ 12.5
GTF2F1P35269 MECP2-204ENST00000415944 413 ntTSL 59.85□□□□□ -0.832e-7■■□□□ 12.5
GTF2F1P35269 MECP2-220ENST00000631210 490 ntTSL 1 (best)8.86□□□□□ -0.992e-7■■□□□ 12.5
GTF2F1P35269 CIZ1-214ENST00000474442 457 ntTSL 48.56□□□□□ -1.042e-7■■□□□ 12.5
GTF2F1P35269 MECP2-219ENST00000630151 322 ntTSL 56.33□□□□□ -1.42e-7■■□□□ 12.5
GTF2F1P35269 MECP2-223ENST00000637791 101 ntTSL 55.42□□□□□ -1.542e-7■■□□□ 12.5
GTF2F1P35269 MECP2-222ENST00000637533 140 ntTSL 52.18□□□□□ -2.062e-7■■□□□ 12.5
GTF2F1P35269 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.77■■■□□ 2.369e-7■■□□□ 12.4
GTF2F1P35269 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.239e-7■■□□□ 12.4
GTF2F1P35269 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.739e-7■■□□□ 12.4
GTF2F1P35269 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.67■■□□□ 1.389e-7■■□□□ 12.4
GTF2F1P35269 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.369e-7■■□□□ 12.4
GTF2F1P35269 MPST-207ENST00000485587 5872 ntTSL 219.62■□□□□ 0.739e-7■■□□□ 12.4
GTF2F1P35269 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.662e-7■■□□□ 12.4
GTF2F1P35269 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.064e-6■■□□□ 12.4
GTF2F1P35269 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.044e-6■■□□□ 12.4
GTF2F1P35269 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.65■□□□□ 0.94e-6■■□□□ 12.4
GTF2F1P35269 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.154e-6■■□□□ 12.4
GTF2F1P35269 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.43■□□□□ 0.064e-6■■□□□ 12.4
GTF2F1P35269 HIGD1A-205ENST00000470543 983 ntTSL 214.51□□□□□ -0.094e-6■■□□□ 12.4
GTF2F1P35269 AC099329.1-201ENST00000625589 539 ntTSL 56.37□□□□□ -1.394e-6■■□□□ 12.4
GTF2F1P35269 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)15.87■□□□□ 0.135e-10■■□□□ 12.4
GTF2F1P35269 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.51■□□□□ 0.397e-11■■□□□ 12.4
GTF2F1P35269 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.11■□□□□ 0.177e-11■■□□□ 12.4
GTF2F1P35269 INPPL1-203ENST00000535985 353 ntTSL 213.27□□□□□ -0.297e-11■■□□□ 12.4
GTF2F1P35269 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.4■□□□□ 0.223e-6■■□□□ 12.4
GTF2F1P35269 TSPEAR-AS1-201ENST00000430181 374 ntTSL 310.4□□□□□ -0.743e-6■■□□□ 12.4
GTF2F1P35269 PPP4R2-203ENST00000470976 1033 ntTSL 229.44■■■□□ 2.36e-6■■□□□ 12.4
GTF2F1P35269 PPP4R2-205ENST00000482242 771 ntTSL 329.26■■■□□ 2.276e-6■■□□□ 12.4
GTF2F1P35269 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.266e-6■■□□□ 12.4
GTF2F1P35269 PPP4R2-206ENST00000488810 877 ntTSL 528.49■■■□□ 2.156e-6■■□□□ 12.4
GTF2F1P35269 DMTN-218ENST00000522148 616 ntTSL 526.49■■□□□ 1.836e-6■■□□□ 12.4
GTF2F1P35269 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.696e-6■■□□□ 12.4
GTF2F1P35269 SLC2A4RG-203ENST00000474248 624 ntTSL 225.41■■□□□ 1.666e-6■■□□□ 12.4
GTF2F1P35269 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.436e-6■■□□□ 12.4
GTF2F1P35269 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.156e-6■■□□□ 12.4
GTF2F1P35269 POLR3E-205ENST00000563024 473 ntTSL 421.95■■□□□ 1.16e-6■■□□□ 12.4
GTF2F1P35269 POLR3E-214ENST00000565358 565 ntTSL 421.95■■□□□ 1.16e-6■■□□□ 12.4
GTF2F1P35269 TKT-204ENST00000450814 1941 ntTSL 219.39■□□□□ 0.76e-6■■□□□ 12.4
GTF2F1P35269 DMTN-213ENST00000519850 587 ntTSL 418.77■□□□□ 0.66e-6■■□□□ 12.4
GTF2F1P35269 DMTN-221ENST00000523300 601 ntTSL 418.34■□□□□ 0.536e-6■■□□□ 12.4
GTF2F1P35269 DMTN-215ENST00000519959 578 ntTSL 418.05■□□□□ 0.486e-6■■□□□ 12.4
GTF2F1P35269 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.446e-6■■□□□ 12.4
GTF2F1P35269 TKT-210ENST00000469678 1871 ntTSL 517.46■□□□□ 0.396e-6■■□□□ 12.4
GTF2F1P35269 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.43■□□□□ 0.386e-6■■□□□ 12.4
GTF2F1P35269 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)17.16■□□□□ 0.346e-6■■□□□ 12.4
GTF2F1P35269 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.1■□□□□ 0.336e-6■■□□□ 12.4
GTF2F1P35269 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.57■□□□□ 0.246e-6■■□□□ 12.4
GTF2F1P35269 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.246e-6■■□□□ 12.4
GTF2F1P35269 TKT-211ENST00000472528 1055 ntTSL 1 (best)16.36■□□□□ 0.216e-6■■□□□ 12.4
GTF2F1P35269 POLR3E-215ENST00000565551 645 ntTSL 516.2■□□□□ 0.186e-6■■□□□ 12.4
GTF2F1P35269 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.086e-6■■□□□ 12.4
Retrieved 100 of 18,214 protein–RNA pairs in 85.2 ms