RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
HIGD1A-205ENST00000470543 ABCC9O60706 1549 aa29.14■■■□□ 2.25
HIGD1A-205ENST00000470543 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
HIGD1A-205ENST00000470543 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
HIGD1A-205ENST00000470543 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
HIGD1A-205ENST00000470543 NACADO15069 1562 aa27.26■■□□□ 1.96
HIGD1A-205ENST00000470543 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
HIGD1A-205ENST00000470543 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
HIGD1A-205ENST00000470543 UNC13AQ9UPW8 1703 aa26.97■■□□□ 1.91
HIGD1A-205ENST00000470543 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
HIGD1A-205ENST00000470543 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.86
HIGD1A-205ENST00000470543 SHROOM4Q9ULL8 1493 aa26.37■■□□□ 1.81
HIGD1A-205ENST00000470543 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
HIGD1A-205ENST00000470543 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
HIGD1A-205ENST00000470543 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
HIGD1A-205ENST00000470543 SCRIBQ14160 1630 aa26.22■■□□□ 1.79
HIGD1A-205ENST00000470543 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
HIGD1A-205ENST00000470543 EIF4G1Q04637 1599 aaKnown RBP26.14■■□□□ 1.78
HIGD1A-205ENST00000470543 DNAJC5Q9H3Z4 198 aa25.61■■□□□ 1.69
HIGD1A-205ENST00000470543 CUX2O14529 1486 aa25.28■■□□□ 1.64
HIGD1A-205ENST00000470543 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
HIGD1A-205ENST00000470543 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
HIGD1A-205ENST00000470543 ATAD2BQ9ULI0 1458 aa25■■□□□ 1.59
HIGD1A-205ENST00000470543 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
HIGD1A-205ENST00000470543 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
HIGD1A-205ENST00000470543 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
HIGD1A-205ENST00000470543 NESP48681 1621 aa24.88■■□□□ 1.57
HIGD1A-205ENST00000470543 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
HIGD1A-205ENST00000470543 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
HIGD1A-205ENST00000470543 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
HIGD1A-205ENST00000470543 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
HIGD1A-205ENST00000470543 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
HIGD1A-205ENST00000470543 KIF21AQ7Z4S6 1674 aa24.63■■□□□ 1.53
HIGD1A-205ENST00000470543 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
HIGD1A-205ENST00000470543 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
HIGD1A-205ENST00000470543 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
HIGD1A-205ENST00000470543 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
HIGD1A-205ENST00000470543 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
HIGD1A-205ENST00000470543 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
HIGD1A-205ENST00000470543 WDR62O43379 1518 aa24.31■■□□□ 1.48
HIGD1A-205ENST00000470543 WIZO95785 1651 aa24.22■■□□□ 1.47
HIGD1A-205ENST00000470543 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
HIGD1A-205ENST00000470543 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
HIGD1A-205ENST00000470543 OSCARQ8IYS5 282 aa24.01■■□□□ 1.43
HIGD1A-205ENST00000470543 CFTRP13569 1480 aa23.98■■□□□ 1.43
HIGD1A-205ENST00000470543 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
HIGD1A-205ENST00000470543 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
HIGD1A-205ENST00000470543 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
HIGD1A-205ENST00000470543 RIMBP3CA6NJZ7 1639 aa23.81■■□□□ 1.4
HIGD1A-205ENST00000470543 RIMBP3BA6NNM3 1639 aa23.81■■□□□ 1.4
HIGD1A-205ENST00000470543 RIMBP3Q9UFD9 1639 aa23.81■■□□□ 1.4
HIGD1A-205ENST00000470543 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
HIGD1A-205ENST00000470543 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
HIGD1A-205ENST00000470543 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
HIGD1A-205ENST00000470543 ARHGEF11O15085 1522 aa23.68■■□□□ 1.38
HIGD1A-205ENST00000470543 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
HIGD1A-205ENST00000470543 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
HIGD1A-205ENST00000470543 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
HIGD1A-205ENST00000470543 CHD1O14646 1710 aa23.54■■□□□ 1.36
HIGD1A-205ENST00000470543 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
HIGD1A-205ENST00000470543 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
HIGD1A-205ENST00000470543 CYB5RLQ6IPT4 315 aa23.49■■□□□ 1.35
HIGD1A-205ENST00000470543 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
HIGD1A-205ENST00000470543 FBLN2P98095 1184 aa23.42■■□□□ 1.34
HIGD1A-205ENST00000470543 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
HIGD1A-205ENST00000470543 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.343e-7■■■□□ 16.1
HIGD1A-205ENST00000470543 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
HIGD1A-205ENST00000470543 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
HIGD1A-205ENST00000470543 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
HIGD1A-205ENST00000470543 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
HIGD1A-205ENST00000470543 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
HIGD1A-205ENST00000470543 SOGA1O94964 1423 aa23.21■■□□□ 1.31
HIGD1A-205ENST00000470543 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
HIGD1A-205ENST00000470543 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
HIGD1A-205ENST00000470543 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
HIGD1A-205ENST00000470543 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
HIGD1A-205ENST00000470543 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
HIGD1A-205ENST00000470543 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
HIGD1A-205ENST00000470543 GRIN2BQ13224 1484 aa23.09■■□□□ 1.29
HIGD1A-205ENST00000470543 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
HIGD1A-205ENST00000470543 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
HIGD1A-205ENST00000470543 CUX1P39880 1505 aa23.04■■□□□ 1.28
HIGD1A-205ENST00000470543 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
HIGD1A-205ENST00000470543 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
HIGD1A-205ENST00000470543 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
HIGD1A-205ENST00000470543 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
HIGD1A-205ENST00000470543 ADAMTS12P58397 1594 aa22.77■■□□□ 1.24
HIGD1A-205ENST00000470543 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
HIGD1A-205ENST00000470543 CEP170Q5SW79 1584 aa22.75■■□□□ 1.23
HIGD1A-205ENST00000470543 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
HIGD1A-205ENST00000470543 NUP160Q12769 1436 aa22.68■■□□□ 1.22
HIGD1A-205ENST00000470543 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
HIGD1A-205ENST00000470543 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.21
HIGD1A-205ENST00000470543 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
HIGD1A-205ENST00000470543 KIF13AQ9H1H9 1805 aa22.63■■□□□ 1.21
HIGD1A-205ENST00000470543 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
HIGD1A-205ENST00000470543 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
HIGD1A-205ENST00000470543 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
HIGD1A-205ENST00000470543 PRG4Q92954 1404 aaPredicted RBP22.53■■□□□ 1.2
HIGD1A-205ENST00000470543 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms