RNA–Protein interactions for RNA: ENST00000637791.1

MECP2-223, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-223ENST00000637791 NISCHQ9Y2I1 1504 aa10.33□□□□□ -0.76
MECP2-223ENST00000637791 CCDC180Q9P1Z9 1646 aa8.96□□□□□ -0.98
MECP2-223ENST00000637791 ZCCHC6Q5VYS8 1495 aaKnown RBP8.67□□□□□ -1.02
MECP2-223ENST00000637791 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
MECP2-223ENST00000637791 DCAF1Q9Y4B6 1507 aa8.59□□□□□ -1.03
MECP2-223ENST00000637791 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
MECP2-223ENST00000637791 MYO15BQ96JP2 1530 aa8.46□□□□□ -1.05
MECP2-223ENST00000637791 NACADO15069 1562 aa8.37□□□□□ -1.07
MECP2-223ENST00000637791 SUPT5HO00267 1087 aaKnown RBP8.37□□□□□ -1.07
MECP2-223ENST00000637791 ABCC9O60706 1549 aa8.32□□□□□ -1.08
MECP2-223ENST00000637791 RB1CC1Q8TDY2 1594 aa8.27□□□□□ -1.09
MECP2-223ENST00000637791 SCRIBQ14160 1630 aa8.2□□□□□ -1.1
MECP2-223ENST00000637791 RSF1Q96T23 1441 aaPredicted RBP8.05□□□□□ -1.12
MECP2-223ENST00000637791 CHIC1Q5VXU3 224 aa8.03□□□□□ -1.12
MECP2-223ENST00000637791 BAZ1AQ9NRL2 1556 aaPredicted RBP8.02□□□□□ -1.13
MECP2-223ENST00000637791 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
MECP2-223ENST00000637791 CECR2Q9BXF3 1484 aa7.93□□□□□ -1.14
MECP2-223ENST00000637791 MROH2BQ7Z745 1585 aa7.92□□□□□ -1.14
MECP2-223ENST00000637791 PABPN1Q86U42 306 aaKnown RBP eCLIP7.9□□□□□ -1.14
MECP2-223ENST00000637791 SMARCA4P51532 1647 aa7.89□□□□□ -1.15
MECP2-223ENST00000637791 UNC13AQ9UPW8 1703 aa7.87□□□□□ -1.15
MECP2-223ENST00000637791 TOP2AP11388 1531 aaKnown RBP7.86□□□□□ -1.15
MECP2-223ENST00000637791 WIZO95785 1651 aa7.84□□□□□ -1.15
MECP2-223ENST00000637791 SMARCA2P51531 1590 aa7.84□□□□□ -1.15
MECP2-223ENST00000637791 BICRAQ9NZM4 1560 aa7.82□□□□□ -1.16
MECP2-223ENST00000637791 PEG3Q9GZU2 1588 aa7.79□□□□□ -1.16
MECP2-223ENST00000637791 BAZ1BQ9UIG0 1483 aaKnown RBP7.78□□□□□ -1.16
MECP2-223ENST00000637791 CCDC88BA6NC98 1476 aa7.76□□□□□ -1.17
MECP2-223ENST00000637791 ATAD2BQ9ULI0 1458 aa7.75□□□□□ -1.17
MECP2-223ENST00000637791 EEA1Q15075 1411 aa7.74□□□□□ -1.17
MECP2-223ENST00000637791 NCAPD3P42695 1498 aa7.7□□□□□ -1.18
MECP2-223ENST00000637791 FAM9AQ8IZU1 332 aaPredicted RBP7.7□□□□□ -1.18
MECP2-223ENST00000637791 LOC105371045A0A1W2PR82 267 aa7.69□□□□□ -1.18
MECP2-223ENST00000637791 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
MECP2-223ENST00000637791 EIF4G1Q04637 1599 aaKnown RBP7.67□□□□□ -1.18
MECP2-223ENST00000637791 WRNQ14191 1432 aaPredicted RBP eCLIP7.66□□□□□ -1.18
MECP2-223ENST00000637791 TRIM26Q12899 539 aaPredicted RBP7.64□□□□□ -1.19
MECP2-223ENST00000637791 CSRNP3Q8WYN3 585 aa7.64□□□□□ -1.19
MECP2-223ENST00000637791 DNAJC5BQ9UF47 199 aa7.63□□□□□ -1.19
MECP2-223ENST00000637791 UBTFP17480 764 aaKnown RBP7.61□□□□□ -1.19
MECP2-223ENST00000637791 PCGF6Q9BYE7 350 aa7.58□□□□□ -1.2
MECP2-223ENST00000637791 ZEB1P37275 1124 aaPredicted RBP7.57□□□□□ -1.2
MECP2-223ENST00000637791 APLP2Q06481 763 aa7.57□□□□□ -1.2
MECP2-223ENST00000637791 ABCC8Q09428 1581 aa7.57□□□□□ -1.2
MECP2-223ENST00000637791 TNIKQ9UKE5 1360 aa7.57□□□□□ -1.2
MECP2-223ENST00000637791 CADPSQ9ULU8 1353 aa7.55□□□□□ -1.2
MECP2-223ENST00000637791 CFTRP13569 1480 aa7.55□□□□□ -1.2
MECP2-223ENST00000637791 GOLGA3Q08378 1498 aa7.55□□□□□ -1.2
MECP2-223ENST00000637791 CEP164Q9UPV0 1460 aa7.55□□□□□ -1.2
MECP2-223ENST00000637791 EHMT2Q96KQ7 1210 aa7.54□□□□□ -1.2
MECP2-223ENST00000637791 KIF27Q86VH2 1401 aa7.52□□□□□ -1.21
MECP2-223ENST00000637791 TOP2BQ02880 1626 aa7.51□□□□□ -1.21
MECP2-223ENST00000637791 CC2D2AQ9P2K1 1620 aa7.51□□□□□ -1.21
MECP2-223ENST00000637791 SOGA1O94964 1423 aa7.5□□□□□ -1.21
MECP2-223ENST00000637791 HRCP23327 699 aa7.49□□□□□ -1.21
MECP2-223ENST00000637791 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
MECP2-223ENST00000637791 KIF21BO75037 1637 aa7.47□□□□□ -1.21
MECP2-223ENST00000637791 BIVM-ERCC5R4GMW8 1640 aa7.47□□□□□ -1.21
MECP2-223ENST00000637791 PRDM2Q13029 1718 aa7.47□□□□□ -1.21
MECP2-223ENST00000637791 SYNJ1O43426 1573 aa7.46□□□□□ -1.21
MECP2-223ENST00000637791 PDS5BQ9NTI5 1447 aa7.46□□□□□ -1.21
MECP2-223ENST00000637791 DNAJC5Q9H3Z4 198 aa7.46□□□□□ -1.22
MECP2-223ENST00000637791 ERICH3Q5RHP9 1530 aa7.43□□□□□ -1.22
MECP2-223ENST00000637791 LAMC3Q9Y6N6 1575 aa7.43□□□□□ -1.22
MECP2-223ENST00000637791 CLIP1P30622 1438 aa7.43□□□□□ -1.22
MECP2-223ENST00000637791 FANCD2Q9BXW9 1451 aa7.43□□□□□ -1.22
MECP2-223ENST00000637791 CUX1P39880 1505 aa7.4□□□□□ -1.22
MECP2-223ENST00000637791 RUSC2Q8N2Y8 1516 aa7.39□□□□□ -1.23
MECP2-223ENST00000637791 CUX2O14529 1486 aa7.39□□□□□ -1.23
MECP2-223ENST00000637791 DNMBPQ6XZF7 1577 aa7.37□□□□□ -1.23
MECP2-223ENST00000637791 PRXQ9BXM0 1461 aa7.37□□□□□ -1.23
MECP2-223ENST00000637791 CARMIL1Q5VZK9 1371 aa7.37□□□□□ -1.23
MECP2-223ENST00000637791 RAPGEF2Q9Y4G8 1499 aa7.36□□□□□ -1.23
MECP2-223ENST00000637791 VPS8Q8N3P4 1428 aa7.36□□□□□ -1.23
MECP2-223ENST00000637791 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
MECP2-223ENST00000637791 RANGAP1P46060 587 aaPredicted RBP7.34□□□□□ -1.23
MECP2-223ENST00000637791 CCER1Q8TC90 406 aaPredicted RBP7.34□□□□□ -1.23
MECP2-223ENST00000637791 IGF1RP08069 1367 aa7.33□□□□□ -1.24
MECP2-223ENST00000637791 TOPBP1Q92547 1522 aa7.33□□□□□ -1.24
MECP2-223ENST00000637791 ABCA10Q8WWZ4 1543 aa7.32□□□□□ -1.24
MECP2-223ENST00000637791 FHAD1B1AJZ9 1412 aa7.32□□□□□ -1.24
MECP2-223ENST00000637791 PPARGC1BQ86YN6 1023 aaKnown RBP7.31□□□□□ -1.24
MECP2-223ENST00000637791 CUL7Q14999 1698 aa7.29□□□□□ -1.24
MECP2-223ENST00000637791 POLA1P09884 1462 aaPredicted RBP7.29□□□□□ -1.24
MECP2-223ENST00000637791 NESP48681 1621 aa7.27□□□□□ -1.25
MECP2-223ENST00000637791 MRC2Q9UBG0 1479 aa7.27□□□□□ -1.25
MECP2-223ENST00000637791 TTBK1Q5TCY1 1321 aaPredicted RBP7.27□□□□□ -1.25
MECP2-223ENST00000637791 GAPVD1Q14C86 1478 aa7.26□□□□□ -1.25
MECP2-223ENST00000637791 ERCC6Q03468 1493 aa7.25□□□□□ -1.25
MECP2-223ENST00000637791 ATP1B4Q9UN42 357 aaPredicted RBP7.25□□□□□ -1.25
MECP2-223ENST00000637791 EFCAB5A4FU69 1503 aa7.25□□□□□ -1.25
MECP2-223ENST00000637791 FMN1Q68DA7 1419 aa7.25□□□□□ -1.25
MECP2-223ENST00000637791 RAD54L2Q9Y4B4 1467 aa7.24□□□□□ -1.25
MECP2-223ENST00000637791 MAP3K1Q13233 1512 aa7.24□□□□□ -1.25
MECP2-223ENST00000637791 URB2Q14146 1524 aaKnown RBP7.24□□□□□ -1.25
MECP2-223ENST00000637791 ACIN1Q9UKV3 1341 aaKnown RBP7.24□□□□□ -1.25
MECP2-223ENST00000637791 IFT140Q96RY7 1462 aa7.24□□□□□ -1.25
MECP2-223ENST00000637791 WDR97A6NE52 1622 aa7.23□□□□□ -1.25
MECP2-223ENST00000637791 CLSPNQ9HAW4 1339 aa7.23□□□□□ -1.25
MECP2-223ENST00000637791 TDRD9Q8NDG6 1382 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms