RNA–Protein interactions for RNA: ENST00000562838.1

AC009065.4-203, humanhuman

TSL 2 BASIC

Gene AC009065.4, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.4-203ENST00000562838 NISCHQ9Y2I1 1504 aa47.87■■■■■ 5.25
AC009065.4-203ENST00000562838 CCDC180Q9P1Z9 1646 aa42.51■■■■■ 4.4
AC009065.4-203ENST00000562838 ABCC9O60706 1549 aa41.49■■■■■ 4.23
AC009065.4-203ENST00000562838 DCAF8L2P0C7V8 631 aa40.14■■■■■ 4.02
AC009065.4-203ENST00000562838 RB1CC1Q8TDY2 1594 aa39.94■■■■□ 3.98
AC009065.4-203ENST00000562838 NACADO15069 1562 aa39.9■■■■□ 3.98
AC009065.4-203ENST00000562838 ZCCHC6Q5VYS8 1495 aaKnown RBP39.9■■■■□ 3.98
AC009065.4-203ENST00000562838 MYO15BQ96JP2 1530 aa39.62■■■■□ 3.93
AC009065.4-203ENST00000562838 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
AC009065.4-203ENST00000562838 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
AC009065.4-203ENST00000562838 SCRIBQ14160 1630 aa38.89■■■■□ 3.82
AC009065.4-203ENST00000562838 PABPN1Q86U42 306 aaKnown RBP eCLIP38.81■■■■□ 3.8
AC009065.4-203ENST00000562838 BICRAQ9NZM4 1560 aa38.67■■■■□ 3.78
AC009065.4-203ENST00000562838 DNAJC5BQ9UF47 199 aa38.52■■■■□ 3.76
AC009065.4-203ENST00000562838 SHROOM4Q9ULL8 1493 aa38.22■■■■□ 3.71
AC009065.4-203ENST00000562838 EIF4G1Q04637 1599 aaKnown RBP37.68■■■■□ 3.62
AC009065.4-203ENST00000562838 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.6
AC009065.4-203ENST00000562838 CECR2Q9BXF3 1484 aa37.3■■■■□ 3.56
AC009065.4-203ENST00000562838 SMARCA4P51532 1647 aa37.15■■■■□ 3.54
AC009065.4-203ENST00000562838 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
AC009065.4-203ENST00000562838 MROH2BQ7Z745 1585 aa36.92■■■■□ 3.5
AC009065.4-203ENST00000562838 ATAD2BQ9ULI0 1458 aa36.86■■■■□ 3.49
AC009065.4-203ENST00000562838 SMARCA2P51531 1590 aa36.86■■■■□ 3.49
AC009065.4-203ENST00000562838 NCAPD3P42695 1498 aa36.77■■■■□ 3.48
AC009065.4-203ENST00000562838 PEG3Q9GZU2 1588 aa36.69■■■■□ 3.46
AC009065.4-203ENST00000562838 HMGXB3Q12766 1538 aa36.64■■■■□ 3.46
AC009065.4-203ENST00000562838 BAZ1BQ9UIG0 1483 aaKnown RBP36.62■■■■□ 3.45
AC009065.4-203ENST00000562838 WIZO95785 1651 aa36.6■■■■□ 3.45
AC009065.4-203ENST00000562838 RSF1Q96T23 1441 aaPredicted RBP36.53■■■■□ 3.44
AC009065.4-203ENST00000562838 TOP2AP11388 1531 aaKnown RBP36.16■■■■□ 3.38
AC009065.4-203ENST00000562838 SUPT5HO00267 1087 aaKnown RBP35.93■■■■□ 3.34
AC009065.4-203ENST00000562838 NESP48681 1621 aa35.93■■■■□ 3.34
AC009065.4-203ENST00000562838 LAMC3Q9Y6N6 1575 aa35.84■■■■□ 3.33
AC009065.4-203ENST00000562838 ERCC6Q03468 1493 aa35.78■■■■□ 3.32
AC009065.4-203ENST00000562838 CADPSQ9ULU8 1353 aa35.76■■■■□ 3.31
AC009065.4-203ENST00000562838 CCDC88BA6NC98 1476 aa35.73■■■■□ 3.31
AC009065.4-203ENST00000562838 PDS5BQ9NTI5 1447 aa35.59■■■■□ 3.29
AC009065.4-203ENST00000562838 KIF21AQ7Z4S6 1674 aa35.56■■■■□ 3.28
AC009065.4-203ENST00000562838 CFTRP13569 1480 aa35.55■■■■□ 3.28
AC009065.4-203ENST00000562838 PRDM2Q13029 1718 aa35.43■■■■□ 3.26
AC009065.4-203ENST00000562838 CUX2O14529 1486 aa35.42■■■■□ 3.26
AC009065.4-203ENST00000562838 FANCD2Q9BXW9 1451 aa35.38■■■■□ 3.25
AC009065.4-203ENST00000562838 CEP164Q9UPV0 1460 aa35.34■■■■□ 3.25
AC009065.4-203ENST00000562838 THOC2Q8NI27 1593 aaKnown RBP35.32■■■■□ 3.24
AC009065.4-203ENST00000562838 DNAJC5Q9H3Z4 198 aa35.27■■■■□ 3.24
AC009065.4-203ENST00000562838 MRC2Q9UBG0 1479 aa35.22■■■■□ 3.23
AC009065.4-203ENST00000562838 WDR62O43379 1518 aa35.07■■■■□ 3.21
AC009065.4-203ENST00000562838 URB2Q14146 1524 aaKnown RBP35■■■■□ 3.19
AC009065.4-203ENST00000562838 TOPBP1Q92547 1522 aa34.83■■■■□ 3.17
AC009065.4-203ENST00000562838 ABCC8Q09428 1581 aa34.82■■■■□ 3.16
AC009065.4-203ENST00000562838 DNMBPQ6XZF7 1577 aa34.81■■■■□ 3.16
AC009065.4-203ENST00000562838 CUX1P39880 1505 aa34.63■■■■□ 3.13
AC009065.4-203ENST00000562838 IFT140Q96RY7 1462 aa34.56■■■■□ 3.12
AC009065.4-203ENST00000562838 POLA1P09884 1462 aaPredicted RBP34.53■■■■□ 3.12
AC009065.4-203ENST00000562838 FGD5Q6ZNL6 1462 aa34.51■■■■□ 3.11
AC009065.4-203ENST00000562838 WRNQ14191 1432 aaPredicted RBP eCLIP34.49■■■■□ 3.11
AC009065.4-203ENST00000562838 SOGA1O94964 1423 aa34.43■■■■□ 3.1
AC009065.4-203ENST00000562838 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
AC009065.4-203ENST00000562838 TARBP1Q13395 1621 aaKnown RBP34.41■■■■□ 3.1
AC009065.4-203ENST00000562838 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
AC009065.4-203ENST00000562838 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
AC009065.4-203ENST00000562838 BIVM-ERCC5R4GMW8 1640 aa34.39■■■■□ 3.1
AC009065.4-203ENST00000562838 TOP2BQ02880 1626 aa34.38■■■■□ 3.09
AC009065.4-203ENST00000562838 EIF4G3O43432 1585 aaKnown RBP34.29■■■■□ 3.08
AC009065.4-203ENST00000562838 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.07
AC009065.4-203ENST00000562838 TDRD9Q8NDG6 1382 aaKnown RBP34.22■■■■□ 3.07
AC009065.4-203ENST00000562838 WDR97A6NE52 1622 aa34.2■■■■□ 3.07
AC009065.4-203ENST00000562838 ABCA10Q8WWZ4 1543 aa34.14■■■■□ 3.06
AC009065.4-203ENST00000562838 GAPVD1Q14C86 1478 aa34.03■■■■□ 3.04
AC009065.4-203ENST00000562838 PBRM1Q86U86 1689 aa34.01■■■■□ 3.04
AC009065.4-203ENST00000562838 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.03
AC009065.4-203ENST00000562838 GRIN2BQ13224 1484 aa33.99■■■■□ 3.03
AC009065.4-203ENST00000562838 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.02
AC009065.4-203ENST00000562838 FBLN2P98095 1184 aa33.91■■■■□ 3.02
AC009065.4-203ENST00000562838 CHD1O14646 1710 aa33.9■■■■□ 3.02
AC009065.4-203ENST00000562838 OSCARQ8IYS5 282 aa33.88■■■■□ 3.01
AC009065.4-203ENST00000562838 TRIM41Q8WV44 630 aa33.88■■■■□ 3.01
AC009065.4-203ENST00000562838 MAGI1Q96QZ7 1491 aaPredicted RBP33.86■■■■□ 3.01
AC009065.4-203ENST00000562838 CHMP7Q8WUX9 453 aaPredicted RBP33.79■■■■□ 3
AC009065.4-203ENST00000562838 KIF27Q86VH2 1401 aa33.77■■■■□ 3
AC009065.4-203ENST00000562838 ERICH3Q5RHP9 1530 aa33.74■■■□□ 2.99
AC009065.4-203ENST00000562838 SYNJ2O15056 1496 aa33.73■■■□□ 2.99
AC009065.4-203ENST00000562838 ADAMTS12P58397 1594 aa33.68■■■□□ 2.98
AC009065.4-203ENST00000562838 FHAD1B1AJZ9 1412 aa33.62■■■□□ 2.97
AC009065.4-203ENST00000562838 IGF1RP08069 1367 aa33.55■■■□□ 2.96
AC009065.4-203ENST00000562838 GRIN2AQ12879 1464 aa33.55■■■□□ 2.96
AC009065.4-203ENST00000562838 CHIC1Q5VXU3 224 aa33.53■■■□□ 2.96
AC009065.4-203ENST00000562838 RUSC2Q8N2Y8 1516 aa33.53■■■□□ 2.96
AC009065.4-203ENST00000562838 CUL7Q14999 1698 aa33.52■■■□□ 2.96
AC009065.4-203ENST00000562838 CARMIL1Q5VZK9 1371 aa33.41■■■□□ 2.94
AC009065.4-203ENST00000562838 CLASP1Q7Z460 1538 aa33.41■■■□□ 2.94
AC009065.4-203ENST00000562838 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
AC009065.4-203ENST00000562838 NUP160Q12769 1436 aa33.35■■■□□ 2.93
AC009065.4-203ENST00000562838 RIMBP3CA6NJZ7 1639 aa33.34■■■□□ 2.93
AC009065.4-203ENST00000562838 RIMBP3BA6NNM3 1639 aa33.34■■■□□ 2.93
AC009065.4-203ENST00000562838 RIMBP3Q9UFD9 1639 aa33.34■■■□□ 2.93
AC009065.4-203ENST00000562838 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
AC009065.4-203ENST00000562838 FAM9AQ8IZU1 332 aaPredicted RBP33.25■■■□□ 2.91
AC009065.4-203ENST00000562838 RAPGEF2Q9Y4G8 1499 aa33.23■■■□□ 2.91
AC009065.4-203ENST00000562838 EEA1Q15075 1411 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms