RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
MECP2-201ENST00000303391 MYT1Q01538 1121 aa17.86■□□□□ 0.45
MECP2-201ENST00000303391 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
MECP2-201ENST00000303391 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
MECP2-201ENST00000303391 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
MECP2-201ENST00000303391 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
MECP2-201ENST00000303391 ERICH6Q7L0X2 663 aa16.96■□□□□ 0.31
MECP2-201ENST00000303391 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
MECP2-201ENST00000303391 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
MECP2-201ENST00000303391 APLP2Q06481 763 aa16.66■□□□□ 0.26
MECP2-201ENST00000303391 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
MECP2-201ENST00000303391 NEFLP07196 543 aa16.54■□□□□ 0.24
MECP2-201ENST00000303391 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
MECP2-201ENST00000303391 PCGF6Q9BYE7 350 aa16.45■□□□□ 0.22
MECP2-201ENST00000303391 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
MECP2-201ENST00000303391 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
MECP2-201ENST00000303391 DAXXQ9UER7 740 aaPredicted RBP16.13■□□□□ 0.17
MECP2-201ENST00000303391 HRCP23327 699 aa16.02■□□□□ 0.16
MECP2-201ENST00000303391 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
MECP2-201ENST00000303391 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.15
MECP2-201ENST00000303391 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
MECP2-201ENST00000303391 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
MECP2-201ENST00000303391 ZNF316A6NFI3 1004 aaPredicted RBP15.72■□□□□ 0.11
MECP2-201ENST00000303391 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
MECP2-201ENST00000303391 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
MECP2-201ENST00000303391 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
MECP2-201ENST00000303391 GLIPR1L2Q4G1C9 344 aa15.58■□□□□ 0.09
MECP2-201ENST00000303391 DIEXFQ68CQ4 756 aaKnown RBP15.53■□□□□ 0.08
MECP2-201ENST00000303391 CDK11AQ9UQ88 783 aaPredicted RBP15.44■□□□□ 0.06
MECP2-201ENST00000303391 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
MECP2-201ENST00000303391 GTF3C3Q9Y5Q9 886 aa15.33■□□□□ 0.05
MECP2-201ENST00000303391 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
MECP2-201ENST00000303391 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
MECP2-201ENST00000303391 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
MECP2-201ENST00000303391 ANP32BQ92688 251 aaKnown RBP15.22■□□□□ 0.03
MECP2-201ENST00000303391 ANP32CO43423 234 aa15.16■□□□□ 0.02
MECP2-201ENST00000303391 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
MECP2-201ENST00000303391 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
MECP2-201ENST00000303391 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
MECP2-201ENST00000303391 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
MECP2-201ENST00000303391 EIF5BO60841 1220 aaKnown RBP15.07■□□□□ 0
MECP2-201ENST00000303391 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
MECP2-201ENST00000303391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02□□□□□ -0.01
MECP2-201ENST00000303391 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
MECP2-201ENST00000303391 ITGAEP38570 1179 aa14.95□□□□□ -0.02
MECP2-201ENST00000303391 BCANQ96GW7 911 aa14.94□□□□□ -0.02
MECP2-201ENST00000303391 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
MECP2-201ENST00000303391 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
MECP2-201ENST00000303391 TNNT2P45379 298 aaPredicted RBP14.91□□□□□ -0.02
MECP2-201ENST00000303391 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
MECP2-201ENST00000303391 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
MECP2-201ENST00000303391 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
MECP2-201ENST00000303391 NEFMP07197 916 aa14.83□□□□□ -0.04
MECP2-201ENST00000303391 HSP90AA1P07900 732 aaKnown RBP14.8□□□□□ -0.04
MECP2-201ENST00000303391 DDRGK1Q96HY6 314 aa14.76□□□□□ -0.05
MECP2-201ENST00000303391 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
MECP2-201ENST00000303391 FAM50AQ14320 339 aaKnown RBP14.72□□□□□ -0.05
MECP2-201ENST00000303391 ERICH6BQ5W0A0 696 aa14.72□□□□□ -0.05
MECP2-201ENST00000303391 TRIM44Q96DX7 344 aaPredicted RBP14.72□□□□□ -0.05
MECP2-201ENST00000303391 FKBP8Q14318 412 aa14.71□□□□□ -0.05
MECP2-201ENST00000303391 NPM2Q86SE8 214 aaKnown RBP14.69□□□□□ -0.06
MECP2-201ENST00000303391 NCLP19338 710 aaKnown RBP14.69□□□□□ -0.06
MECP2-201ENST00000303391 CNGB1Q14028 1251 aaPredicted RBP14.67□□□□□ -0.06
MECP2-201ENST00000303391 BECN1Q14457 450 aa14.66□□□□□ -0.06
MECP2-201ENST00000303391 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
MECP2-201ENST00000303391 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.65□□□□□ -0.06
MECP2-201ENST00000303391 TRIM52Q96A61 297 aa14.65□□□□□ -0.06
MECP2-201ENST00000303391 CCDC136Q96JN2 1154 aa14.62□□□□□ -0.07
MECP2-201ENST00000303391 NBR1Q14596 966 aa14.61□□□□□ -0.07
MECP2-201ENST00000303391 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
MECP2-201ENST00000303391 PPM1GO15355 546 aaPredicted RBP14.58□□□□□ -0.08
MECP2-201ENST00000303391 GOLGA6L22H0YM25 854 aa14.57□□□□□ -0.08
MECP2-201ENST00000303391 TONSLQ96HA7 1378 aa14.56□□□□□ -0.08
MECP2-201ENST00000303391 HNRNPUQ00839 825 aaKnown RBP eCLIP14.53□□□□□ -0.08
MECP2-201ENST00000303391 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
MECP2-201ENST00000303391 ZNF326Q5BKZ1 582 aaKnown RBP14.44□□□□□ -0.1
MECP2-201ENST00000303391 BCL11AQ9H165 835 aa14.43□□□□□ -0.1
MECP2-201ENST00000303391 MYH16Q9H6N6 1097 aa14.4□□□□□ -0.1
MECP2-201ENST00000303391 L1TD1Q5T7N2 865 aaKnown RBP14.39□□□□□ -0.11
MECP2-201ENST00000303391 NAP1L5Q96NT1 182 aaPredicted RBP14.39□□□□□ -0.11
MECP2-201ENST00000303391 NOP58Q9Y2X3 529 aaKnown RBP14.37□□□□□ -0.11
MECP2-201ENST00000303391 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
MECP2-201ENST00000303391 PTMAP06454 111 aaKnown RBP14.35□□□□□ -0.11
MECP2-201ENST00000303391 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
MECP2-201ENST00000303391 GOLGA6L6A8MZA4 724 aa14.34□□□□□ -0.11
MECP2-201ENST00000303391 PTMSP20962 102 aa14.32□□□□□ -0.12
MECP2-201ENST00000303391 NRDCO43847 1150 aa14.32□□□□□ -0.12
MECP2-201ENST00000303391 DNTTIP2Q5QJE6 756 aaKnown RBP14.3□□□□□ -0.12
MECP2-201ENST00000303391 WDR43Q15061 677 aaKnown RBP eCLIP14.29□□□□□ -0.12
MECP2-201ENST00000303391 FAM9BQ8IZU0 186 aa14.29□□□□□ -0.12
MECP2-201ENST00000303391 CASC1Q6TDU7 716 aa14.29□□□□□ -0.12
MECP2-201ENST00000303391 DDX10Q13206 875 aaKnown RBP14.28□□□□□ -0.12
MECP2-201ENST00000303391 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
MECP2-201ENST00000303391 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
MECP2-201ENST00000303391 ARID4BQ4LE39 1312 aaPredicted RBP14.26□□□□□ -0.13
MECP2-201ENST00000303391 PPP4R2Q9NY27 417 aa14.26□□□□□ -0.13
MECP2-201ENST00000303391 ARXQ96QS3 562 aa14.26□□□□□ -0.13
MECP2-201ENST00000303391 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
MECP2-201ENST00000303391 MIER1Q8N108 512 aa14.24□□□□□ -0.13
MECP2-201ENST00000303391 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms