RNA–Protein interactions for RNA: ENST00000369957.5

MECP2-202, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-202ENST00000369957 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
MECP2-202ENST00000369957 ABCC9O60706 1549 aa21.23■□□□□ 0.99
MECP2-202ENST00000369957 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
MECP2-202ENST00000369957 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
MECP2-202ENST00000369957 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
MECP2-202ENST00000369957 NACADO15069 1562 aa19.85■□□□□ 0.77
MECP2-202ENST00000369957 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
MECP2-202ENST00000369957 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
MECP2-202ENST00000369957 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
MECP2-202ENST00000369957 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
MECP2-202ENST00000369957 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
MECP2-202ENST00000369957 ZCCHC6Q5VYS8 1495 aaKnown RBP19.25■□□□□ 0.67
MECP2-202ENST00000369957 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
MECP2-202ENST00000369957 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
MECP2-202ENST00000369957 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
MECP2-202ENST00000369957 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
MECP2-202ENST00000369957 CECR2Q9BXF3 1484 aa19.11■□□□□ 0.65
MECP2-202ENST00000369957 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
MECP2-202ENST00000369957 DNAJC5Q9H3Z4 198 aa18.62■□□□□ 0.57
MECP2-202ENST00000369957 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
MECP2-202ENST00000369957 CUX2O14529 1486 aa18.32■□□□□ 0.52
MECP2-202ENST00000369957 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
MECP2-202ENST00000369957 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
MECP2-202ENST00000369957 NESP48681 1621 aa18.21■□□□□ 0.51
MECP2-202ENST00000369957 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
MECP2-202ENST00000369957 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
MECP2-202ENST00000369957 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
MECP2-202ENST00000369957 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
MECP2-202ENST00000369957 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
MECP2-202ENST00000369957 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
MECP2-202ENST00000369957 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
MECP2-202ENST00000369957 MROH2BQ7Z745 1585 aa17.98■□□□□ 0.47
MECP2-202ENST00000369957 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
MECP2-202ENST00000369957 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
MECP2-202ENST00000369957 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
MECP2-202ENST00000369957 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
MECP2-202ENST00000369957 WIZO95785 1651 aa17.75■□□□□ 0.43
MECP2-202ENST00000369957 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
MECP2-202ENST00000369957 WDR62O43379 1518 aa17.71■□□□□ 0.43
MECP2-202ENST00000369957 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
MECP2-202ENST00000369957 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
MECP2-202ENST00000369957 FANCD2Q9BXW9 1451 aa17.59■□□□□ 0.41
MECP2-202ENST00000369957 CFTRP13569 1480 aa17.55■□□□□ 0.4
MECP2-202ENST00000369957 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
MECP2-202ENST00000369957 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
MECP2-202ENST00000369957 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
MECP2-202ENST00000369957 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
MECP2-202ENST00000369957 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.37
MECP2-202ENST00000369957 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
MECP2-202ENST00000369957 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
MECP2-202ENST00000369957 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
MECP2-202ENST00000369957 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
MECP2-202ENST00000369957 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
MECP2-202ENST00000369957 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
MECP2-202ENST00000369957 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
MECP2-202ENST00000369957 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
MECP2-202ENST00000369957 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
MECP2-202ENST00000369957 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
MECP2-202ENST00000369957 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
MECP2-202ENST00000369957 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
MECP2-202ENST00000369957 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
MECP2-202ENST00000369957 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
MECP2-202ENST00000369957 CHD1O14646 1710 aa17.1■□□□□ 0.33
MECP2-202ENST00000369957 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
MECP2-202ENST00000369957 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
MECP2-202ENST00000369957 RAD54L2Q9Y4B4 1467 aa17.04■□□□□ 0.32
MECP2-202ENST00000369957 FBLN2P98095 1184 aa17.02■□□□□ 0.32
MECP2-202ENST00000369957 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
MECP2-202ENST00000369957 SOGA1O94964 1423 aa16.96■□□□□ 0.31
MECP2-202ENST00000369957 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
MECP2-202ENST00000369957 SNAPC4Q5SXM2 1469 aa16.93■□□□□ 0.3
MECP2-202ENST00000369957 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
MECP2-202ENST00000369957 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
MECP2-202ENST00000369957 CUX1P39880 1505 aa16.9■□□□□ 0.3
MECP2-202ENST00000369957 CHMP7Q8WUX9 453 aaPredicted RBP16.84■□□□□ 0.29
MECP2-202ENST00000369957 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
MECP2-202ENST00000369957 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.28
MECP2-202ENST00000369957 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
MECP2-202ENST00000369957 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
MECP2-202ENST00000369957 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
MECP2-202ENST00000369957 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
MECP2-202ENST00000369957 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
MECP2-202ENST00000369957 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
MECP2-202ENST00000369957 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
MECP2-202ENST00000369957 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
MECP2-202ENST00000369957 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
MECP2-202ENST00000369957 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
MECP2-202ENST00000369957 NUP160Q12769 1436 aa16.59■□□□□ 0.25
MECP2-202ENST00000369957 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
MECP2-202ENST00000369957 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
MECP2-202ENST00000369957 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
MECP2-202ENST00000369957 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
MECP2-202ENST00000369957 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
MECP2-202ENST00000369957 TOP2BQ02880 1626 aa16.52■□□□□ 0.24
MECP2-202ENST00000369957 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
MECP2-202ENST00000369957 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
MECP2-202ENST00000369957 ERICH3Q5RHP9 1530 aa16.46■□□□□ 0.23
MECP2-202ENST00000369957 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
MECP2-202ENST00000369957 PRG4Q92954 1404 aaPredicted RBP16.44■□□□□ 0.22
MECP2-202ENST00000369957 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms