RNA–Protein interactions for RNA: ENST00000482242.5

PPP4R2-205, Transcript of protein phosphatase 4 regulatory subunit 2, humanhuman

TSL 3

Gene PPP4R2, Length 771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2-205ENST00000482242 NISCHQ9Y2I1 1504 aa64.69■■■■■ 7.95
PPP4R2-205ENST00000482242 CCDC180Q9P1Z9 1646 aa57.58■■■■■ 6.81
PPP4R2-205ENST00000482242 ABCC9O60706 1549 aa56.74■■■■■ 6.67
PPP4R2-205ENST00000482242 DCAF8L2P0C7V8 631 aa54.5■■■■■ 6.32
PPP4R2-205ENST00000482242 RB1CC1Q8TDY2 1594 aa54.39■■■■■ 6.3
PPP4R2-205ENST00000482242 NACADO15069 1562 aa54.25■■■■■ 6.27
PPP4R2-205ENST00000482242 ZCCHC6Q5VYS8 1495 aaKnown RBP53.77■■■■■ 6.2
PPP4R2-205ENST00000482242 MYO15BQ96JP2 1530 aa53.73■■■■■ 6.19
PPP4R2-205ENST00000482242 DCAF1Q9Y4B6 1507 aa53.42■■■■■ 6.14
PPP4R2-205ENST00000482242 UNC13AQ9UPW8 1703 aa53.2■■■■■ 6.11
PPP4R2-205ENST00000482242 PABPN1Q86U42 306 aaKnown RBP eCLIP53.07■■■■■ 6.09
PPP4R2-205ENST00000482242 BICRAQ9NZM4 1560 aa52.71■■■■■ 6.03
PPP4R2-205ENST00000482242 SCRIBQ14160 1630 aa52.62■■■■■ 6.01
PPP4R2-205ENST00000482242 DNAJC5BQ9UF47 199 aa52.35■■■■■ 5.97
PPP4R2-205ENST00000482242 SHROOM4Q9ULL8 1493 aa52.02■■■■■ 5.92
PPP4R2-205ENST00000482242 EIF4G1Q04637 1599 aaKnown RBP51.36■■■■■ 5.81
PPP4R2-205ENST00000482242 CC2D2AQ9P2K1 1620 aa51.27■■■■■ 5.8
PPP4R2-205ENST00000482242 CECR2Q9BXF3 1484 aa50.97■■■■■ 5.75
PPP4R2-205ENST00000482242 SMARCA4P51532 1647 aa50.25■■■■■ 5.63
PPP4R2-205ENST00000482242 BAZ1AQ9NRL2 1556 aaPredicted RBP50.15■■■■■ 5.62
PPP4R2-205ENST00000482242 ATAD2BQ9ULI0 1458 aa50.06■■■■■ 5.6
PPP4R2-205ENST00000482242 NCAPD3P42695 1498 aa50.05■■■■■ 5.6
PPP4R2-205ENST00000482242 SMARCA2P51531 1590 aa49.98■■■■■ 5.59
PPP4R2-205ENST00000482242 MROH2BQ7Z745 1585 aa49.87■■■■■ 5.57
PPP4R2-205ENST00000482242 HMGXB3Q12766 1538 aa49.73■■■■■ 5.55
PPP4R2-205ENST00000482242 PEG3Q9GZU2 1588 aa49.68■■■■■ 5.54
PPP4R2-205ENST00000482242 BAZ1BQ9UIG0 1483 aaKnown RBP49.66■■■■■ 5.54
PPP4R2-205ENST00000482242 WIZO95785 1651 aa49.37■■■■■ 5.49
PPP4R2-205ENST00000482242 RSF1Q96T23 1441 aaPredicted RBP49.2■■■■■ 5.47
PPP4R2-205ENST00000482242 NESP48681 1621 aa49■■■■■ 5.43
PPP4R2-205ENST00000482242 ERCC6Q03468 1493 aa48.94■■■■■ 5.43
PPP4R2-205ENST00000482242 LAMC3Q9Y6N6 1575 aa48.78■■■■■ 5.4
PPP4R2-205ENST00000482242 TOP2AP11388 1531 aaKnown RBP48.74■■■■■ 5.39
PPP4R2-205ENST00000482242 CADPSQ9ULU8 1353 aa48.63■■■■■ 5.37
PPP4R2-205ENST00000482242 PDS5BQ9NTI5 1447 aa48.52■■■■■ 5.36
PPP4R2-205ENST00000482242 CUX2O14529 1486 aa48.42■■■■■ 5.34
PPP4R2-205ENST00000482242 KIF21AQ7Z4S6 1674 aa48.41■■■■■ 5.34
PPP4R2-205ENST00000482242 CCDC88BA6NC98 1476 aa48.24■■■■■ 5.31
PPP4R2-205ENST00000482242 CFTRP13569 1480 aa48.23■■■■■ 5.31
PPP4R2-205ENST00000482242 THOC2Q8NI27 1593 aaKnown RBP48.22■■■■■ 5.31
PPP4R2-205ENST00000482242 FANCD2Q9BXW9 1451 aa48.07■■■■■ 5.29
PPP4R2-205ENST00000482242 CEP164Q9UPV0 1460 aa48.03■■■■■ 5.28
PPP4R2-205ENST00000482242 SUPT5HO00267 1087 aaKnown RBP48■■■■■ 5.27
PPP4R2-205ENST00000482242 MRC2Q9UBG0 1479 aa47.99■■■■■ 5.27
PPP4R2-205ENST00000482242 PRDM2Q13029 1718 aa47.89■■■■■ 5.26
PPP4R2-205ENST00000482242 WDR62O43379 1518 aa47.79■■■■■ 5.24
PPP4R2-205ENST00000482242 URB2Q14146 1524 aaKnown RBP47.57■■■■■ 5.21
PPP4R2-205ENST00000482242 DNAJC5Q9H3Z4 198 aa47.36■■■■■ 5.17
PPP4R2-205ENST00000482242 TOPBP1Q92547 1522 aa47.25■■■■■ 5.16
PPP4R2-205ENST00000482242 ABCC8Q09428 1581 aa47.25■■■■■ 5.15
PPP4R2-205ENST00000482242 DNMBPQ6XZF7 1577 aa47.15■■■■■ 5.14
PPP4R2-205ENST00000482242 IFT140Q96RY7 1462 aa47.02■■■■■ 5.12
PPP4R2-205ENST00000482242 ZNF608Q9ULD9 1512 aaPredicted RBP46.84■■■■■ 5.09
PPP4R2-205ENST00000482242 POLA1P09884 1462 aaPredicted RBP46.82■■■■■ 5.09
PPP4R2-205ENST00000482242 CUX1P39880 1505 aa46.79■■■■■ 5.08
PPP4R2-205ENST00000482242 TARBP1Q13395 1621 aaKnown RBP46.72■■■■■ 5.07
PPP4R2-205ENST00000482242 SOGA1O94964 1423 aa46.71■■■■■ 5.07
PPP4R2-205ENST00000482242 FGD5Q6ZNL6 1462 aa46.7■■■■■ 5.07
PPP4R2-205ENST00000482242 RAD54L2Q9Y4B4 1467 aa46.69■■■■■ 5.06
PPP4R2-205ENST00000482242 EIF4G3O43432 1585 aaKnown RBP46.6■■■■■ 5.05
PPP4R2-205ENST00000482242 AQRO60306 1485 aaKnown RBP eCLIP46.6■■■■■ 5.054e-7■□□□□ 9.9
PPP4R2-205ENST00000482242 OSCARQ8IYS5 282 aa46.54■■■■■ 5.04
PPP4R2-205ENST00000482242 TDRD9Q8NDG6 1382 aaKnown RBP46.5■■■■■ 5.03
PPP4R2-205ENST00000482242 WRNQ14191 1432 aaPredicted RBP eCLIP46.43■■■■■ 5.02
PPP4R2-205ENST00000482242 TOP2BQ02880 1626 aa46.31■■■■■ 5
PPP4R2-205ENST00000482242 BIVM-ERCC5R4GMW8 1640 aa46.3■■■■■ 5
PPP4R2-205ENST00000482242 SYNJ1O43426 1573 aa46.29■■■■■ 5
PPP4R2-205ENST00000482242 WDR97A6NE52 1622 aa46.28■■■■■ 5
PPP4R2-205ENST00000482242 FBLN2P98095 1184 aa46.26■■■■■ 5
PPP4R2-205ENST00000482242 ABCA10Q8WWZ4 1543 aa46.18■■■■■ 4.98
PPP4R2-205ENST00000482242 CHD1O14646 1710 aa46.15■■■■■ 4.98
PPP4R2-205ENST00000482242 GRIN2BQ13224 1484 aa46.13■■■■■ 4.98
PPP4R2-205ENST00000482242 GAPVD1Q14C86 1478 aa46.13■■■■■ 4.98
PPP4R2-205ENST00000482242 SNAPC4Q5SXM2 1469 aa46.11■■■■■ 4.97
PPP4R2-205ENST00000482242 PBRM1Q86U86 1689 aa46.04■■■■■ 4.96
PPP4R2-205ENST00000482242 CHMP7Q8WUX9 453 aaPredicted RBP46.03■■■■■ 4.96
PPP4R2-205ENST00000482242 MAGI1Q96QZ7 1491 aaPredicted RBP46■■■■■ 4.95
PPP4R2-205ENST00000482242 ABCA5Q8WWZ7 1642 aa46■■■■■ 4.95
PPP4R2-205ENST00000482242 SYNJ2O15056 1496 aa45.86■■■■■ 4.93
PPP4R2-205ENST00000482242 TRIM41Q8WV44 630 aa45.83■■■■■ 4.93
PPP4R2-205ENST00000482242 RIMBP3CA6NJZ7 1639 aa45.7■■■■■ 4.91
PPP4R2-205ENST00000482242 RIMBP3BA6NNM3 1639 aa45.7■■■■■ 4.91
PPP4R2-205ENST00000482242 RIMBP3Q9UFD9 1639 aa45.7■■■■■ 4.91
PPP4R2-205ENST00000482242 ARHGEF11O15085 1522 aa45.64■■■■■ 4.9
PPP4R2-205ENST00000482242 ERICH3Q5RHP9 1530 aa45.64■■■■■ 4.9
PPP4R2-205ENST00000482242 ADAMTS12P58397 1594 aa45.58■■■■■ 4.89
PPP4R2-205ENST00000482242 FHAD1B1AJZ9 1412 aa45.57■■■■■ 4.89
PPP4R2-205ENST00000482242 CLASP1Q7Z460 1538 aa45.53■■■■■ 4.88
PPP4R2-205ENST00000482242 GRIN2AQ12879 1464 aa45.53■■■■■ 4.88
PPP4R2-205ENST00000482242 KIF27Q86VH2 1401 aa45.5■■■■■ 4.87
PPP4R2-205ENST00000482242 CYB5RLQ6IPT4 315 aa45.43■■■■■ 4.86
PPP4R2-205ENST00000482242 IGF1RP08069 1367 aa45.35■■■■■ 4.85
PPP4R2-205ENST00000482242 CEP170Q5SW79 1584 aa45.3■■■■■ 4.84
PPP4R2-205ENST00000482242 NUP160Q12769 1436 aa45.3■■■■■ 4.84
PPP4R2-205ENST00000482242 ARAP1Q96P48 1450 aa45.24■■■■■ 4.83
PPP4R2-205ENST00000482242 CUL7Q14999 1698 aa45.18■■■■■ 4.82
PPP4R2-205ENST00000482242 CARMIL1Q5VZK9 1371 aa45.11■■■■■ 4.81
PPP4R2-205ENST00000482242 RUSC2Q8N2Y8 1516 aa45.03■■■■■ 4.8
PPP4R2-205ENST00000482242 JPH4Q96JJ6 628 aa45.02■■■■■ 4.8
PPP4R2-205ENST00000482242 SHROOM2Q13796 1616 aa44.97■■■■■ 4.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms