Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 FADS1-215ENST00000541683 1844 ntTSL 219.19■□□□□ 0.661e-7■■□□□ 12.8
GTF2F1P35269 FADS1-202ENST00000421879 583 ntTSL 317.6■□□□□ 0.411e-7■■□□□ 12.8
GTF2F1P35269 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.41e-7■■□□□ 12.8
GTF2F1P35269 FADS1-203ENST00000424501 926 ntTSL 314.87□□□□□ -0.031e-7■■□□□ 12.8
GTF2F1P35269 FADS1-209ENST00000491310 525 ntTSL 514.72□□□□□ -0.051e-7■■□□□ 12.8
GTF2F1P35269 FADS1-205ENST00000448607 559 ntTSL 413.34□□□□□ -0.271e-7■■□□□ 12.8
GTF2F1P35269 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.63■□□□□ 0.251e-27■■□□□ 12.8
GTF2F1P35269 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.611e-27■■□□□ 12.8
GTF2F1P35269 SPG7-205ENST00000561945 411 ntTSL 316.53■□□□□ 0.247e-11■■□□□ 12.8
GTF2F1P35269 SPG7-207ENST00000563218 654 ntTSL 515.28■□□□□ 0.047e-11■■□□□ 12.8
GTF2F1P35269 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)15.94■□□□□ 0.144e-7■■□□□ 12.8
GTF2F1P35269 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 04e-7■■□□□ 12.8
GTF2F1P35269 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.62□□□□□ -0.074e-7■■□□□ 12.8
GTF2F1P35269 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC12.95□□□□□ -0.344e-7■■□□□ 12.8
GTF2F1P35269 DAZAP1-208ENST00000589874 3642 nt16.08■□□□□ 0.166e-12■■□□□ 12.8
GTF2F1P35269 DAZAP1-203ENST00000585485 3943 ntTSL 214.47□□□□□ -0.096e-12■■□□□ 12.8
GTF2F1P35269 SLC9A3R1-205ENST00000583369 841 ntTSL 325.68■■□□□ 1.71e-8■■□□□ 12.8
GTF2F1P35269 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51e-8■■□□□ 12.8
GTF2F1P35269 TTC39B-204ENST00000505732 1881 ntTSL 1 (best)23.44■■□□□ 1.343e-6■■□□□ 12.8
GTF2F1P35269 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.083e-6■■□□□ 12.8
GTF2F1P35269 SYNJ2-209ENST00000640569 2040 nt20.96■□□□□ 0.953e-6■■□□□ 12.8
GTF2F1P35269 DERL2-208ENST00000573637 876 ntTSL 520.89■□□□□ 0.933e-6■■□□□ 12.8
GTF2F1P35269 CABIN1-208ENST00000467937 593 ntTSL 320.26■□□□□ 0.833e-6■■□□□ 12.8
GTF2F1P35269 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.83e-6■■□□□ 12.8
GTF2F1P35269 LCN12-205ENST00000470501 1804 ntTSL 219.96■□□□□ 0.793e-6■■□□□ 12.8
GTF2F1P35269 WWC2-207ENST00000508614 604 ntTSL 319.67■□□□□ 0.743e-6■■□□□ 12.8
GTF2F1P35269 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.66■□□□□ 0.741e-8■■□□□ 12.8
GTF2F1P35269 DERL2-210ENST00000574952 501 ntTSL 519.39■□□□□ 0.693e-6■■□□□ 12.8
GTF2F1P35269 UBE2O-202ENST00000586409 3579 ntTSL 219.01■□□□□ 0.633e-6■■□□□ 12.8
GTF2F1P35269 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.16■□□□□ 0.51e-8■■□□□ 12.8
GTF2F1P35269 FILIP1L-207ENST00000476723 567 ntTSL 418.08■□□□□ 0.483e-6■■□□□ 12.8
GTF2F1P35269 LCN12-213ENST00000494713 524 ntTSL 217.56■□□□□ 0.43e-6■■□□□ 12.8
GTF2F1P35269 LCN12-206ENST00000471615 489 ntTSL 517.09■□□□□ 0.333e-6■■□□□ 12.8
GTF2F1P35269 LCN12-207ENST00000476751 536 ntTSL 217.09■□□□□ 0.333e-6■■□□□ 12.8
GTF2F1P35269 LCN12-208ENST00000480204 436 ntTSL 317.09■□□□□ 0.333e-6■■□□□ 12.8
GTF2F1P35269 LCN12-210ENST00000491316 629 ntTSL 317.09■□□□□ 0.333e-6■■□□□ 12.8
GTF2F1P35269 DERL2-204ENST00000571968 567 ntTSL 516.84■□□□□ 0.293e-6■■□□□ 12.8
GTF2F1P35269 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.83■□□□□ 0.283e-6■■□□□ 12.8
GTF2F1P35269 ITPA-206ENST00000461029 378 ntTSL 516.67■□□□□ 0.263e-6■■□□□ 12.8
GTF2F1P35269 TET3-204ENST00000496886 710 ntTSL 316.36■□□□□ 0.213e-6■■□□□ 12.8
GTF2F1P35269 LCN12-204ENST00000466277 781 ntTSL 216.3■□□□□ 0.23e-6■■□□□ 12.8
GTF2F1P35269 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC15.47■□□□□ 0.073e-6■■□□□ 12.8
GTF2F1P35269 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.063e-6■■□□□ 12.8
GTF2F1P35269 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.95□□□□□ -0.023e-6■■□□□ 12.8
GTF2F1P35269 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.031e-8■■□□□ 12.8
GTF2F1P35269 LCN12-201ENST00000371632 403 ntTSL 214.24□□□□□ -0.133e-6■■□□□ 12.8
GTF2F1P35269 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.133e-6■■□□□ 12.8
GTF2F1P35269 DERL2-206ENST00000572834 589 ntTSL 3 BASIC14.08□□□□□ -0.163e-6■■□□□ 12.8
GTF2F1P35269 WDR82-201ENST00000296490 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.194e-10■■□□□ 12.8
GTF2F1P35269 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.223e-6■■□□□ 12.8
GTF2F1P35269 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.253e-6■■□□□ 12.8
GTF2F1P35269 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.263e-6■■□□□ 12.8
GTF2F1P35269 DERL2-213ENST00000576551 624 ntTSL 313.44□□□□□ -0.263e-6■■□□□ 12.8
GTF2F1P35269 TTC39B-205ENST00000506891 900 ntTSL 1 (best)13.4□□□□□ -0.263e-6■■□□□ 12.8
GTF2F1P35269 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC13.38□□□□□ -0.271e-8■■□□□ 12.8
GTF2F1P35269 PTP4A1-207ENST00000639568 532 ntTSL 513.09□□□□□ -0.312e-11■■□□□ 12.8
GTF2F1P35269 FILIP1L-210ENST00000495625 2898 ntTSL 1 (best)13.04□□□□□ -0.323e-6■■□□□ 12.8
GTF2F1P35269 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.323e-6■■□□□ 12.8
GTF2F1P35269 DERL2-211ENST00000575209 786 ntTSL 212.46□□□□□ -0.413e-6■■□□□ 12.8
GTF2F1P35269 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.433e-6■■□□□ 12.8
GTF2F1P35269 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.463e-6■■□□□ 12.8
GTF2F1P35269 WDR82-204ENST00000487402 4333 ntTSL 211.85□□□□□ -0.514e-10■■□□□ 12.8
GTF2F1P35269 TTC17-201ENST00000039989 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.571e-8■■□□□ 12.8
GTF2F1P35269 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.583e-6■■□□□ 12.8
GTF2F1P35269 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.613e-6■■□□□ 12.8
GTF2F1P35269 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.633e-6■■□□□ 12.8
GTF2F1P35269 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC10.64□□□□□ -0.713e-6■■□□□ 12.8
GTF2F1P35269 ATXN10-204ENST00000435026 653 ntTSL 310.63□□□□□ -0.711e-8■■□□□ 12.8
GTF2F1P35269 UBE2N-203ENST00000549490 676 ntTSL 210.53□□□□□ -0.723e-6■■□□□ 12.8
GTF2F1P35269 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.773e-6■■□□□ 12.8
GTF2F1P35269 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.793e-6■■□□□ 12.8
GTF2F1P35269 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC9.98□□□□□ -0.813e-6■■□□□ 12.8
GTF2F1P35269 DERL2-209ENST00000574700 1087 ntTSL 39.46□□□□□ -0.93e-6■■□□□ 12.8
GTF2F1P35269 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.943e-6■■□□□ 12.8
GTF2F1P35269 DERL2-205ENST00000571971 617 ntTSL 39.13□□□□□ -0.953e-6■■□□□ 12.8
GTF2F1P35269 ATXN10-205ENST00000451241 514 ntTSL 38.43□□□□□ -1.061e-8■■□□□ 12.8
GTF2F1P35269 NAP1L4-215ENST00000528363 685 ntTSL 27.87□□□□□ -1.153e-6■■□□□ 12.8
GTF2F1P35269 ATXN10-210ENST00000493643 617 ntTSL 57.51□□□□□ -1.211e-8■■□□□ 12.8
GTF2F1P35269 NAP1L4-210ENST00000492685 850 ntTSL 57.45□□□□□ -1.223e-6■■□□□ 12.8
GTF2F1P35269 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.05□□□□□ -1.283e-6■■□□□ 12.8
GTF2F1P35269 NFIA-214ENST00000496712 603 ntTSL 37.03□□□□□ -1.282e-11■■□□□ 12.8
GTF2F1P35269 TTC17-208ENST00000526774 3360 ntTSL 1 (best)6.51□□□□□ -1.371e-8■■□□□ 12.8
GTF2F1P35269 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.443e-6■■□□□ 12.8
GTF2F1P35269 RAD18-206ENST00000427329 557 ntTSL 35.97□□□□□ -1.451e-8■■□□□ 12.8
GTF2F1P35269 DERL2-203ENST00000571476 570 ntTSL 35.45□□□□□ -1.543e-6■■□□□ 12.8
GTF2F1P35269 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.833e-6■■□□□ 12.8
GTF2F1P35269 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.71■■■□□ 2.677e-16■■□□□ 12.8
GTF2F1P35269 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.42■■■□□ 2.627e-16■■□□□ 12.8
GTF2F1P35269 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.42■■■□□ 2.627e-16■■□□□ 12.8
GTF2F1P35269 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.181e-30■■□□□ 12.8
GTF2F1P35269 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)20.76■□□□□ 0.913e-6■■□□□ 12.7
GTF2F1P35269 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.893e-6■■□□□ 12.7
GTF2F1P35269 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.673e-6■■□□□ 12.7
GTF2F1P35269 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)19.21■□□□□ 0.673e-6■■□□□ 12.7
GTF2F1P35269 DLGAP4-214ENST00000491207 469 ntTSL 415.36■□□□□ 0.052e-6■■□□□ 12.7
GTF2F1P35269 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.01■□□□□ 0.952e-11■■□□□ 12.7
GTF2F1P35269 DHX30-204ENST00000441384 1957 ntTSL 214□□□□□ -0.172e-11■■□□□ 12.7
GTF2F1P35269 SEPT2-244ENST00000495463 501 ntTSL 430.41■■■□□ 2.462e-10■■□□□ 12.7
GTF2F1P35269 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.6■■■□□ 2.336e-6■■□□□ 12.7
GTF2F1P35269 SIGMAR1-204ENST00000461426 939 ntTSL 1 (best)28.94■■■□□ 2.226e-6■■□□□ 12.7
Retrieved 100 of 18,214 protein–RNA pairs in 88.3 ms