RNA–Protein interactions for RNA: ENST00000427329.5

RAD18-206, Transcript of RAD18, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RAD18, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD18-206ENST00000427329 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
RAD18-206ENST00000427329 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
RAD18-206ENST00000427329 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
RAD18-206ENST00000427329 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
RAD18-206ENST00000427329 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
RAD18-206ENST00000427329 FOXD1Q16676 465 aa17.22■□□□□ 0.35
RAD18-206ENST00000427329 PPP6R1Q9UPN7 881 aa16.55■□□□□ 0.24
RAD18-206ENST00000427329 ADRA2BP18089 450 aa16.51■□□□□ 0.23
RAD18-206ENST00000427329 PIAS4Q8N2W9 510 aaPredicted RBP16.2■□□□□ 0.18
RAD18-206ENST00000427329 MSH5O43196 834 aa15.87■□□□□ 0.13
RAD18-206ENST00000427329 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
RAD18-206ENST00000427329 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
RAD18-206ENST00000427329 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
RAD18-206ENST00000427329 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
RAD18-206ENST00000427329 KCNA4P22459 653 aa14.82□□□□□ -0.04
RAD18-206ENST00000427329 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
RAD18-206ENST00000427329 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
RAD18-206ENST00000427329 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
RAD18-206ENST00000427329 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
RAD18-206ENST00000427329 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.09
RAD18-206ENST00000427329 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
RAD18-206ENST00000427329 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
RAD18-206ENST00000427329 DCAF8L1A6NGE4 600 aa14.07□□□□□ -0.16
RAD18-206ENST00000427329 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
RAD18-206ENST00000427329 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
RAD18-206ENST00000427329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAD18-206ENST00000427329 ZBTB22O15209 634 aa13.66□□□□□ -0.22
RAD18-206ENST00000427329 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
RAD18-206ENST00000427329 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
RAD18-206ENST00000427329 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
RAD18-206ENST00000427329 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
RAD18-206ENST00000427329 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
RAD18-206ENST00000427329 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
RAD18-206ENST00000427329 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
RAD18-206ENST00000427329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
RAD18-206ENST00000427329 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
RAD18-206ENST00000427329 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
RAD18-206ENST00000427329 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
RAD18-206ENST00000427329 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
RAD18-206ENST00000427329 APLP2Q06481 763 aa13.18□□□□□ -0.3
RAD18-206ENST00000427329 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
RAD18-206ENST00000427329 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
RAD18-206ENST00000427329 CAPN15O75808 1086 aa13.09□□□□□ -0.31
RAD18-206ENST00000427329 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
RAD18-206ENST00000427329 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
RAD18-206ENST00000427329 DSG3P32926 999 aa12.95□□□□□ -0.34
RAD18-206ENST00000427329 ABCB7O75027 752 aa12.86□□□□□ -0.35
RAD18-206ENST00000427329 POLA2Q14181 598 aa12.82□□□□□ -0.36
RAD18-206ENST00000427329 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
RAD18-206ENST00000427329 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
RAD18-206ENST00000427329 FBLN2P98095 1184 aa12.51□□□□□ -0.41
RAD18-206ENST00000427329 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
RAD18-206ENST00000427329 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
RAD18-206ENST00000427329 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
RAD18-206ENST00000427329 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
RAD18-206ENST00000427329 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
RAD18-206ENST00000427329 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
RAD18-206ENST00000427329 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
RAD18-206ENST00000427329 FKBP8Q14318 412 aa12.19□□□□□ -0.46
RAD18-206ENST00000427329 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
RAD18-206ENST00000427329 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
RAD18-206ENST00000427329 PROM2Q8N271 834 aa12.08□□□□□ -0.48
RAD18-206ENST00000427329 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
RAD18-206ENST00000427329 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
RAD18-206ENST00000427329 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
RAD18-206ENST00000427329 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
RAD18-206ENST00000427329 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
RAD18-206ENST00000427329 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
RAD18-206ENST00000427329 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
RAD18-206ENST00000427329 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
RAD18-206ENST00000427329 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
RAD18-206ENST00000427329 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
RAD18-206ENST00000427329 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
RAD18-206ENST00000427329 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
RAD18-206ENST00000427329 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
RAD18-206ENST00000427329 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
RAD18-206ENST00000427329 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
RAD18-206ENST00000427329 POTEHQ6S545 545 aa11.58□□□□□ -0.56
RAD18-206ENST00000427329 MIER1Q8N108 512 aa11.55□□□□□ -0.56
RAD18-206ENST00000427329 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
RAD18-206ENST00000427329 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
RAD18-206ENST00000427329 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
RAD18-206ENST00000427329 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
RAD18-206ENST00000427329 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
RAD18-206ENST00000427329 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
RAD18-206ENST00000427329 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
RAD18-206ENST00000427329 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
RAD18-206ENST00000427329 NUBP1P53384 320 aa11.34□□□□□ -0.59
RAD18-206ENST00000427329 C19orf67A6NJJ6 358 aa11.31□□□□□ -0.6
RAD18-206ENST00000427329 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
RAD18-206ENST00000427329 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
RAD18-206ENST00000427329 HAX1O00165 279 aa11.25□□□□□ -0.61
RAD18-206ENST00000427329 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
RAD18-206ENST00000427329 EVX2Q03828 476 aa11.23□□□□□ -0.61
RAD18-206ENST00000427329 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
RAD18-206ENST00000427329 FAM212AQ96EL1 285 aa11.19□□□□□ -0.62
RAD18-206ENST00000427329 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
RAD18-206ENST00000427329 ZRANB1Q9UGI0 708 aa11.17□□□□□ -0.62
RAD18-206ENST00000427329 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
RAD18-206ENST00000427329 GSE1Q14687 1217 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms