RNA–Protein interactions for RNA: ENST00000583369.5

SLC9A3R1-205, Transcript of SLC9A3 regulator 1, humanhuman

TSL 3

Gene SLC9A3R1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-205ENST00000583369 NISCHQ9Y2I1 1504 aa56.96■■■■■ 6.71
SLC9A3R1-205ENST00000583369 CCDC180Q9P1Z9 1646 aa50.67■■■■■ 5.7
SLC9A3R1-205ENST00000583369 ABCC9O60706 1549 aa49.97■■■■■ 5.59
SLC9A3R1-205ENST00000583369 RB1CC1Q8TDY2 1594 aa47.91■■■■■ 5.26
SLC9A3R1-205ENST00000583369 DCAF8L2P0C7V8 631 aa47.82■■■■■ 5.25
SLC9A3R1-205ENST00000583369 NACADO15069 1562 aa47.8■■■■■ 5.24
SLC9A3R1-205ENST00000583369 MYO15BQ96JP2 1530 aa47.46■■■■■ 5.19
SLC9A3R1-205ENST00000583369 ZCCHC6Q5VYS8 1495 aaKnown RBP47.36■■■■■ 5.17
SLC9A3R1-205ENST00000583369 DCAF1Q9Y4B6 1507 aa47.13■■■■■ 5.14
SLC9A3R1-205ENST00000583369 PABPN1Q86U42 306 aaKnown RBP eCLIP46.72■■■■■ 5.07
SLC9A3R1-205ENST00000583369 UNC13AQ9UPW8 1703 aa46.65■■■■■ 5.06
SLC9A3R1-205ENST00000583369 BICRAQ9NZM4 1560 aa46.45■■■■■ 5.03
SLC9A3R1-205ENST00000583369 DNAJC5BQ9UF47 199 aa46.23■■■■■ 4.99
SLC9A3R1-205ENST00000583369 SCRIBQ14160 1630 aa46.22■■■■■ 4.99
SLC9A3R1-205ENST00000583369 SHROOM4Q9ULL8 1493 aa46■■■■■ 4.95
SLC9A3R1-205ENST00000583369 EIF4G1Q04637 1599 aaKnown RBP45.26■■■■■ 4.84
SLC9A3R1-205ENST00000583369 CC2D2AQ9P2K1 1620 aa45.14■■■■■ 4.82
SLC9A3R1-205ENST00000583369 CECR2Q9BXF3 1484 aa44.96■■■■■ 4.79
SLC9A3R1-205ENST00000583369 SMARCA4P51532 1647 aa44.21■■■■■ 4.67
SLC9A3R1-205ENST00000583369 NCAPD3P42695 1498 aa44.18■■■■■ 4.66
SLC9A3R1-205ENST00000583369 BAZ1AQ9NRL2 1556 aaPredicted RBP44.16■■■■■ 4.66
SLC9A3R1-205ENST00000583369 ATAD2BQ9ULI0 1458 aa44.13■■■■■ 4.65
SLC9A3R1-205ENST00000583369 SMARCA2P51531 1590 aa44.02■■■■■ 4.64
SLC9A3R1-205ENST00000583369 MROH2BQ7Z745 1585 aa43.88■■■■■ 4.61
SLC9A3R1-205ENST00000583369 HMGXB3Q12766 1538 aa43.85■■■■■ 4.61
SLC9A3R1-205ENST00000583369 PEG3Q9GZU2 1588 aa43.81■■■■■ 4.6
SLC9A3R1-205ENST00000583369 BAZ1BQ9UIG0 1483 aaKnown RBP43.72■■■■■ 4.59
SLC9A3R1-205ENST00000583369 WIZO95785 1651 aa43.33■■■■■ 4.53
SLC9A3R1-205ENST00000583369 RSF1Q96T23 1441 aaPredicted RBP43.32■■■■■ 4.53
SLC9A3R1-205ENST00000583369 NESP48681 1621 aa43.14■■■■■ 4.5
SLC9A3R1-205ENST00000583369 ERCC6Q03468 1493 aa43.11■■■■■ 4.49
SLC9A3R1-205ENST00000583369 LAMC3Q9Y6N6 1575 aa42.98■■■■■ 4.47
SLC9A3R1-205ENST00000583369 TOP2AP11388 1531 aaKnown RBP42.89■■■■■ 4.46
SLC9A3R1-205ENST00000583369 CADPSQ9ULU8 1353 aa42.89■■■■■ 4.46
SLC9A3R1-205ENST00000583369 PDS5BQ9NTI5 1447 aa42.79■■■■■ 4.44
SLC9A3R1-205ENST00000583369 CUX2O14529 1486 aa42.77■■■■■ 4.44
SLC9A3R1-205ENST00000583369 CFTRP13569 1480 aa42.54■■■■■ 4.4
SLC9A3R1-205ENST00000583369 KIF21AQ7Z4S6 1674 aa42.5■■■■■ 4.39
SLC9A3R1-205ENST00000583369 THOC2Q8NI27 1593 aaKnown RBP42.48■■■■■ 4.39
SLC9A3R1-205ENST00000583369 CCDC88BA6NC98 1476 aa42.45■■■■■ 4.39
SLC9A3R1-205ENST00000583369 FANCD2Q9BXW9 1451 aa42.34■■■■■ 4.37
SLC9A3R1-205ENST00000583369 MRC2Q9UBG0 1479 aa42.31■■■■■ 4.36
SLC9A3R1-205ENST00000583369 CEP164Q9UPV0 1460 aa42.3■■■■■ 4.36
SLC9A3R1-205ENST00000583369 WDR62O43379 1518 aa42.15■■■■■ 4.34
SLC9A3R1-205ENST00000583369 SUPT5HO00267 1087 aaKnown RBP42.03■■■■■ 4.32
SLC9A3R1-205ENST00000583369 PRDM2Q13029 1718 aa41.96■■■■■ 4.31
SLC9A3R1-205ENST00000583369 URB2Q14146 1524 aaKnown RBP41.92■■■■■ 4.3
SLC9A3R1-205ENST00000583369 DNAJC5Q9H3Z4 198 aa41.91■■■■■ 4.3
SLC9A3R1-205ENST00000583369 ABCC8Q09428 1581 aa41.64■■■■■ 4.26
SLC9A3R1-205ENST00000583369 TOPBP1Q92547 1522 aa41.61■■■■■ 4.25
SLC9A3R1-205ENST00000583369 DNMBPQ6XZF7 1577 aa41.5■■■■■ 4.23
SLC9A3R1-205ENST00000583369 IFT140Q96RY7 1462 aa41.46■■■■■ 4.23
SLC9A3R1-205ENST00000583369 ZNF608Q9ULD9 1512 aaPredicted RBP41.27■■■■■ 4.2
SLC9A3R1-205ENST00000583369 POLA1P09884 1462 aaPredicted RBP41.25■■■■■ 4.19
SLC9A3R1-205ENST00000583369 CUX1P39880 1505 aa41.17■■■■■ 4.18
SLC9A3R1-205ENST00000583369 TARBP1Q13395 1621 aaKnown RBP41.14■■■■■ 4.18
SLC9A3R1-205ENST00000583369 SOGA1O94964 1423 aa41.13■■■■■ 4.17
SLC9A3R1-205ENST00000583369 FGD5Q6ZNL6 1462 aa41.09■■■■■ 4.17
SLC9A3R1-205ENST00000583369 RAD54L2Q9Y4B4 1467 aa41.09■■■■■ 4.17
SLC9A3R1-205ENST00000583369 OSCARQ8IYS5 282 aa41.05■■■■■ 4.16
SLC9A3R1-205ENST00000583369 AQRO60306 1485 aaKnown RBP eCLIP41.04■■■■■ 4.164e-8■■■■■ 30.2
SLC9A3R1-205ENST00000583369 EIF4G3O43432 1585 aaKnown RBP41.01■■■■■ 4.16
SLC9A3R1-205ENST00000583369 TDRD9Q8NDG6 1382 aaKnown RBP40.94■■■■■ 4.14
SLC9A3R1-205ENST00000583369 WRNQ14191 1432 aaPredicted RBP eCLIP40.84■■■■■ 4.13
SLC9A3R1-205ENST00000583369 WDR97A6NE52 1622 aa40.81■■■■■ 4.12
SLC9A3R1-205ENST00000583369 TOP2BQ02880 1626 aa40.72■■■■■ 4.11
SLC9A3R1-205ENST00000583369 ABCA10Q8WWZ4 1543 aa40.7■■■■■ 4.11
SLC9A3R1-205ENST00000583369 SYNJ1O43426 1573 aa40.68■■■■■ 4.1
SLC9A3R1-205ENST00000583369 BIVM-ERCC5R4GMW8 1640 aa40.67■■■■■ 4.1
SLC9A3R1-205ENST00000583369 GRIN2BQ13224 1484 aa40.65■■■■■ 4.1
SLC9A3R1-205ENST00000583369 FBLN2P98095 1184 aa40.65■■■■■ 4.1
SLC9A3R1-205ENST00000583369 GAPVD1Q14C86 1478 aa40.62■■■■■ 4.09
SLC9A3R1-205ENST00000583369 SNAPC4Q5SXM2 1469 aa40.6■■■■■ 4.09
SLC9A3R1-205ENST00000583369 MAGI1Q96QZ7 1491 aaPredicted RBP40.57■■■■■ 4.08
SLC9A3R1-205ENST00000583369 CHMP7Q8WUX9 453 aaPredicted RBP40.51■■■■■ 4.08
SLC9A3R1-205ENST00000583369 CHD1O14646 1710 aa40.5■■■■■ 4.07
SLC9A3R1-205ENST00000583369 ABCA5Q8WWZ7 1642 aa40.49■■■■■ 4.07
SLC9A3R1-205ENST00000583369 SYNJ2O15056 1496 aa40.42■■■■■ 4.06
SLC9A3R1-205ENST00000583369 PBRM1Q86U86 1689 aa40.38■■■■■ 4.05
SLC9A3R1-205ENST00000583369 TRIM41Q8WV44 630 aa40.35■■■■■ 4.05
SLC9A3R1-205ENST00000583369 ARHGEF11O15085 1522 aa40.25■■■■■ 4.03
SLC9A3R1-205ENST00000583369 RIMBP3CA6NJZ7 1639 aa40.24■■■■■ 4.03
SLC9A3R1-205ENST00000583369 RIMBP3BA6NNM3 1639 aa40.24■■■■■ 4.03
SLC9A3R1-205ENST00000583369 RIMBP3Q9UFD9 1639 aa40.24■■■■■ 4.03
SLC9A3R1-205ENST00000583369 ERICH3Q5RHP9 1530 aa40.2■■■■■ 4.03
SLC9A3R1-205ENST00000583369 CLASP1Q7Z460 1538 aa40.16■■■■■ 4.02
SLC9A3R1-205ENST00000583369 FHAD1B1AJZ9 1412 aa40.16■■■■■ 4.02
SLC9A3R1-205ENST00000583369 ADAMTS12P58397 1594 aa40.12■■■■■ 4.01
SLC9A3R1-205ENST00000583369 GRIN2AQ12879 1464 aa40.11■■■■■ 4.01
SLC9A3R1-205ENST00000583369 KIF27Q86VH2 1401 aa40.04■■■■■ 4
SLC9A3R1-205ENST00000583369 CYB5RLQ6IPT4 315 aa40■■■■□ 3.99
SLC9A3R1-205ENST00000583369 NUP160Q12769 1436 aa39.97■■■■□ 3.99
SLC9A3R1-205ENST00000583369 IGF1RP08069 1367 aa39.96■■■■□ 3.99
SLC9A3R1-205ENST00000583369 ARAP1Q96P48 1450 aa39.91■■■■□ 3.98
SLC9A3R1-205ENST00000583369 CEP170Q5SW79 1584 aa39.87■■■■□ 3.97
SLC9A3R1-205ENST00000583369 CUL7Q14999 1698 aa39.7■■■■□ 3.95
SLC9A3R1-205ENST00000583369 CARMIL1Q5VZK9 1371 aa39.7■■■■□ 3.95
SLC9A3R1-205ENST00000583369 JPH4Q96JJ6 628 aa39.64■■■■□ 3.94
SLC9A3R1-205ENST00000583369 SHROOM2Q13796 1616 aa39.62■■■■□ 3.93
SLC9A3R1-205ENST00000583369 ERCC6L2Q5T890 1561 aa39.56■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms