RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
SPG7-207ENST00000563218 ABCC9O60706 1549 aa30.52■■■□□ 2.48
SPG7-207ENST00000563218 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
SPG7-207ENST00000563218 RB1CC1Q8TDY2 1594 aa28.98■■■□□ 2.23
SPG7-207ENST00000563218 NACADO15069 1562 aa28.72■■■□□ 2.19
SPG7-207ENST00000563218 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
SPG7-207ENST00000563218 UNC13AQ9UPW8 1703 aa28.62■■■□□ 2.17
SPG7-207ENST00000563218 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
SPG7-207ENST00000563218 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.137e-8■□□□□ 9.4
SPG7-207ENST00000563218 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
SPG7-207ENST00000563218 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
SPG7-207ENST00000563218 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
SPG7-207ENST00000563218 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
SPG7-207ENST00000563218 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
SPG7-207ENST00000563218 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
SPG7-207ENST00000563218 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
SPG7-207ENST00000563218 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
SPG7-207ENST00000563218 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
SPG7-207ENST00000563218 DNAJC5Q9H3Z4 198 aa26.83■■□□□ 1.89
SPG7-207ENST00000563218 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
SPG7-207ENST00000563218 NCAPD3P42695 1498 aa26.46■■□□□ 1.83
SPG7-207ENST00000563218 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
SPG7-207ENST00000563218 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
SPG7-207ENST00000563218 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
SPG7-207ENST00000563218 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
SPG7-207ENST00000563218 CUX2O14529 1486 aa26.28■■□□□ 1.8
SPG7-207ENST00000563218 NESP48681 1621 aa26.24■■□□□ 1.79
SPG7-207ENST00000563218 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
SPG7-207ENST00000563218 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
SPG7-207ENST00000563218 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
SPG7-207ENST00000563218 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
SPG7-207ENST00000563218 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
SPG7-207ENST00000563218 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
SPG7-207ENST00000563218 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
SPG7-207ENST00000563218 WIZO95785 1651 aa25.87■■□□□ 1.73
SPG7-207ENST00000563218 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
SPG7-207ENST00000563218 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
SPG7-207ENST00000563218 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
SPG7-207ENST00000563218 WDR62O43379 1518 aa25.58■■□□□ 1.68
SPG7-207ENST00000563218 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
SPG7-207ENST00000563218 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
SPG7-207ENST00000563218 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
SPG7-207ENST00000563218 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
SPG7-207ENST00000563218 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
SPG7-207ENST00000563218 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
SPG7-207ENST00000563218 CFTRP13569 1480 aa25.37■■□□□ 1.65
SPG7-207ENST00000563218 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
SPG7-207ENST00000563218 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
SPG7-207ENST00000563218 ZNF608Q9ULD9 1512 aaPredicted RBP24.99■■□□□ 1.59
SPG7-207ENST00000563218 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
SPG7-207ENST00000563218 OSCARQ8IYS5 282 aa24.94■■□□□ 1.58
SPG7-207ENST00000563218 EIF4G3O43432 1585 aaKnown RBP24.92■■□□□ 1.58
SPG7-207ENST00000563218 IFT140Q96RY7 1462 aa24.91■■□□□ 1.58
SPG7-207ENST00000563218 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
SPG7-207ENST00000563218 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
SPG7-207ENST00000563218 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
SPG7-207ENST00000563218 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
SPG7-207ENST00000563218 CHD1O14646 1710 aa24.83■■□□□ 1.57
SPG7-207ENST00000563218 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.56
SPG7-207ENST00000563218 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
SPG7-207ENST00000563218 ARHGEF11O15085 1522 aa24.73■■□□□ 1.55
SPG7-207ENST00000563218 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.542e-7■□□□□ 8.3
SPG7-207ENST00000563218 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.54
SPG7-207ENST00000563218 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
SPG7-207ENST00000563218 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
SPG7-207ENST00000563218 CUX1P39880 1505 aa24.53■■□□□ 1.52
SPG7-207ENST00000563218 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
SPG7-207ENST00000563218 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
SPG7-207ENST00000563218 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
SPG7-207ENST00000563218 SOGA1O94964 1423 aa24.49■■□□□ 1.51
SPG7-207ENST00000563218 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
SPG7-207ENST00000563218 FBLN2P98095 1184 aa24.46■■□□□ 1.51
SPG7-207ENST00000563218 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
SPG7-207ENST00000563218 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
SPG7-207ENST00000563218 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
SPG7-207ENST00000563218 SYNJ1O43426 1573 aa24.33■■□□□ 1.49
SPG7-207ENST00000563218 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
SPG7-207ENST00000563218 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
SPG7-207ENST00000563218 ABCA5Q8WWZ7 1642 aa24.3■■□□□ 1.48
SPG7-207ENST00000563218 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
SPG7-207ENST00000563218 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
SPG7-207ENST00000563218 TRHP20396 242 aaPredicted RBP24.22■■□□□ 1.47
SPG7-207ENST00000563218 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
SPG7-207ENST00000563218 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
SPG7-207ENST00000563218 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
SPG7-207ENST00000563218 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
SPG7-207ENST00000563218 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
SPG7-207ENST00000563218 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
SPG7-207ENST00000563218 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
SPG7-207ENST00000563218 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
SPG7-207ENST00000563218 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
SPG7-207ENST00000563218 GRIN2AQ12879 1464 aa24.05■■□□□ 1.44
SPG7-207ENST00000563218 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
SPG7-207ENST00000563218 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
SPG7-207ENST00000563218 NUP160Q12769 1436 aa23.95■■□□□ 1.42
SPG7-207ENST00000563218 ERICH3Q5RHP9 1530 aa23.9■■□□□ 1.42
SPG7-207ENST00000563218 FHAD1B1AJZ9 1412 aa23.88■■□□□ 1.41
SPG7-207ENST00000563218 KIF13AQ9H1H9 1805 aa23.83■■□□□ 1.41
SPG7-207ENST00000563218 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
SPG7-207ENST00000563218 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 600.5 ms