RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
TTC17-201ENST00000039989 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
TTC17-201ENST00000039989 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
TTC17-201ENST00000039989 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
TTC17-201ENST00000039989 ABCC9O60706 1549 aa18.77■□□□□ 0.6
TTC17-201ENST00000039989 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
TTC17-201ENST00000039989 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.531e-7■■■□□ 15.5
TTC17-201ENST00000039989 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
TTC17-201ENST00000039989 CCDC180Q9P1Z9 1646 aa18.02■□□□□ 0.47
TTC17-201ENST00000039989 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
TTC17-201ENST00000039989 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
TTC17-201ENST00000039989 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
TTC17-201ENST00000039989 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
TTC17-201ENST00000039989 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.41
TTC17-201ENST00000039989 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
TTC17-201ENST00000039989 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
TTC17-201ENST00000039989 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
TTC17-201ENST00000039989 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
TTC17-201ENST00000039989 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
TTC17-201ENST00000039989 NACADO15069 1562 aa17.31■□□□□ 0.36
TTC17-201ENST00000039989 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
TTC17-201ENST00000039989 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
TTC17-201ENST00000039989 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
TTC17-201ENST00000039989 APLP2Q06481 763 aa17.14■□□□□ 0.33
TTC17-201ENST00000039989 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
TTC17-201ENST00000039989 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
TTC17-201ENST00000039989 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
TTC17-201ENST00000039989 FBLN2P98095 1184 aa16.86■□□□□ 0.29
TTC17-201ENST00000039989 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
TTC17-201ENST00000039989 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
TTC17-201ENST00000039989 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
TTC17-201ENST00000039989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
TTC17-201ENST00000039989 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
TTC17-201ENST00000039989 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
TTC17-201ENST00000039989 ITGAEP38570 1179 aa16.75■□□□□ 0.27
TTC17-201ENST00000039989 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
TTC17-201ENST00000039989 WIZO95785 1651 aa16.7■□□□□ 0.26
TTC17-201ENST00000039989 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
TTC17-201ENST00000039989 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
TTC17-201ENST00000039989 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
TTC17-201ENST00000039989 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
TTC17-201ENST00000039989 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
TTC17-201ENST00000039989 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
TTC17-201ENST00000039989 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
TTC17-201ENST00000039989 ABCC8Q09428 1581 aa16.48■□□□□ 0.23
TTC17-201ENST00000039989 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
TTC17-201ENST00000039989 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
TTC17-201ENST00000039989 SOGA1O94964 1423 aa16.39■□□□□ 0.21
TTC17-201ENST00000039989 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
TTC17-201ENST00000039989 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
TTC17-201ENST00000039989 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
TTC17-201ENST00000039989 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
TTC17-201ENST00000039989 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
TTC17-201ENST00000039989 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
TTC17-201ENST00000039989 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
TTC17-201ENST00000039989 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
TTC17-201ENST00000039989 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
TTC17-201ENST00000039989 CUX2O14529 1486 aa16.19■□□□□ 0.18
TTC17-201ENST00000039989 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
TTC17-201ENST00000039989 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
TTC17-201ENST00000039989 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
TTC17-201ENST00000039989 NESP48681 1621 aa16.16■□□□□ 0.18
TTC17-201ENST00000039989 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
TTC17-201ENST00000039989 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
TTC17-201ENST00000039989 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
TTC17-201ENST00000039989 CLIP1P30622 1438 aa16.12■□□□□ 0.17
TTC17-201ENST00000039989 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
TTC17-201ENST00000039989 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
TTC17-201ENST00000039989 HRCP23327 699 aa16.08■□□□□ 0.16
TTC17-201ENST00000039989 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
TTC17-201ENST00000039989 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
TTC17-201ENST00000039989 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
TTC17-201ENST00000039989 TRIM52Q96A61 297 aa16.05■□□□□ 0.16
TTC17-201ENST00000039989 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
TTC17-201ENST00000039989 ZEB1P37275 1124 aaPredicted RBP16.01■□□□□ 0.15
TTC17-201ENST00000039989 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
TTC17-201ENST00000039989 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
TTC17-201ENST00000039989 EEA1Q15075 1411 aa15.99■□□□□ 0.15
TTC17-201ENST00000039989 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
TTC17-201ENST00000039989 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
TTC17-201ENST00000039989 KCNH8Q96L42 1107 aa15.98■□□□□ 0.15
TTC17-201ENST00000039989 TNIKQ9UKE5 1360 aa15.95■□□□□ 0.14
TTC17-201ENST00000039989 POLR3GLQ9BT43 218 aa15.94■□□□□ 0.14
TTC17-201ENST00000039989 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
TTC17-201ENST00000039989 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
TTC17-201ENST00000039989 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
TTC17-201ENST00000039989 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
TTC17-201ENST00000039989 CFTRP13569 1480 aa15.87■□□□□ 0.13
TTC17-201ENST00000039989 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
TTC17-201ENST00000039989 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
TTC17-201ENST00000039989 KANK4Q5T7N3 995 aaPredicted RBP15.85■□□□□ 0.13
TTC17-201ENST00000039989 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.136e-7■■■□□ 17.3
TTC17-201ENST00000039989 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
TTC17-201ENST00000039989 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
TTC17-201ENST00000039989 PLPPR3Q6T4P5 718 aa15.81■□□□□ 0.12
TTC17-201ENST00000039989 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
TTC17-201ENST00000039989 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
TTC17-201ENST00000039989 IGF1RP08069 1367 aa15.78■□□□□ 0.12
TTC17-201ENST00000039989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.113e-10■■□□□ 11.9
TTC17-201ENST00000039989 FHOD3Q2V2M9 1422 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms