RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 NISCHQ9Y2I1 1504 aa36.84■■■■□ 3.49
SPG7-205ENST00000561945 CCDC180Q9P1Z9 1646 aa33.14■■■□□ 2.9
SPG7-205ENST00000561945 ABCC9O60706 1549 aa32.93■■■□□ 2.86
SPG7-205ENST00000561945 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
SPG7-205ENST00000561945 NACADO15069 1562 aa31.29■■■□□ 2.6
SPG7-205ENST00000561945 DNAJC5BQ9UF47 199 aa31.09■■■□□ 2.57
SPG7-205ENST00000561945 MYO15BQ96JP2 1530 aa30.95■■■□□ 2.55
SPG7-205ENST00000561945 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
SPG7-205ENST00000561945 DCAF8L2P0C7V8 631 aa30.78■■■□□ 2.52
SPG7-205ENST00000561945 BICRAQ9NZM4 1560 aa30.59■■■□□ 2.49
SPG7-205ENST00000561945 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
SPG7-205ENST00000561945 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
SPG7-205ENST00000561945 DCAF1Q9Y4B6 1507 aa30.53■■■□□ 2.48
SPG7-205ENST00000561945 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.44
SPG7-205ENST00000561945 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
SPG7-205ENST00000561945 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
SPG7-205ENST00000561945 EIF4G1Q04637 1599 aaKnown RBP29.8■■■□□ 2.36
SPG7-205ENST00000561945 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
SPG7-205ENST00000561945 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
SPG7-205ENST00000561945 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
SPG7-205ENST00000561945 SMARCA4P51532 1647 aa28.73■■■□□ 2.19
SPG7-205ENST00000561945 SMARCA2P51531 1590 aa28.68■■■□□ 2.18
SPG7-205ENST00000561945 HMGXB3Q12766 1538 aa28.68■■■□□ 2.18
SPG7-205ENST00000561945 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
SPG7-205ENST00000561945 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
SPG7-205ENST00000561945 CUX2O14529 1486 aa28.51■■■□□ 2.15
SPG7-205ENST00000561945 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
SPG7-205ENST00000561945 BAZ1BQ9UIG0 1483 aaKnown RBP28.42■■■□□ 2.14
SPG7-205ENST00000561945 ERCC6Q03468 1493 aa28.41■■■□□ 2.14
SPG7-205ENST00000561945 MROH2BQ7Z745 1585 aa28.34■■■□□ 2.13
SPG7-205ENST00000561945 NESP48681 1621 aa28.32■■■□□ 2.12
SPG7-205ENST00000561945 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
SPG7-205ENST00000561945 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
SPG7-205ENST00000561945 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
SPG7-205ENST00000561945 WIZO95785 1651 aa28■■■□□ 2.07
SPG7-205ENST00000561945 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
SPG7-205ENST00000561945 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
SPG7-205ENST00000561945 MRC2Q9UBG0 1479 aa27.76■■■□□ 2.04
SPG7-205ENST00000561945 WDR62O43379 1518 aa27.76■■■□□ 2.03
SPG7-205ENST00000561945 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
SPG7-205ENST00000561945 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
SPG7-205ENST00000561945 CFTRP13569 1480 aa27.67■■■□□ 2.02
SPG7-205ENST00000561945 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
SPG7-205ENST00000561945 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
SPG7-205ENST00000561945 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
SPG7-205ENST00000561945 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
SPG7-205ENST00000561945 CCDC88BA6NC98 1476 aa27.32■■□□□ 1.96
SPG7-205ENST00000561945 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
SPG7-205ENST00000561945 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
SPG7-205ENST00000561945 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
SPG7-205ENST00000561945 OSCARQ8IYS5 282 aa27.09■■□□□ 1.93
SPG7-205ENST00000561945 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
SPG7-205ENST00000561945 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
SPG7-205ENST00000561945 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
SPG7-205ENST00000561945 EIF4G3O43432 1585 aaKnown RBP26.93■■□□□ 1.9
SPG7-205ENST00000561945 TARBP1Q13395 1621 aaKnown RBP26.93■■□□□ 1.9
SPG7-205ENST00000561945 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
SPG7-205ENST00000561945 RIMBP3CA6NJZ7 1639 aa26.82■■□□□ 1.88
SPG7-205ENST00000561945 RIMBP3BA6NNM3 1639 aa26.82■■□□□ 1.88
SPG7-205ENST00000561945 RIMBP3Q9UFD9 1639 aa26.82■■□□□ 1.88
SPG7-205ENST00000561945 AQRO60306 1485 aaKnown RBP eCLIP26.75■■□□□ 1.877e-7■■■■□ 26.1
SPG7-205ENST00000561945 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
SPG7-205ENST00000561945 CHD1O14646 1710 aa26.73■■□□□ 1.87
SPG7-205ENST00000561945 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
SPG7-205ENST00000561945 RAD54L2Q9Y4B4 1467 aa26.67■■□□□ 1.86
SPG7-205ENST00000561945 SOGA1O94964 1423 aa26.65■■□□□ 1.86
SPG7-205ENST00000561945 FGD5Q6ZNL6 1462 aa26.63■■□□□ 1.85
SPG7-205ENST00000561945 CUX1P39880 1505 aa26.63■■□□□ 1.85
SPG7-205ENST00000561945 TDRD9Q8NDG6 1382 aaKnown RBP26.57■■□□□ 1.84
SPG7-205ENST00000561945 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
SPG7-205ENST00000561945 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
SPG7-205ENST00000561945 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
SPG7-205ENST00000561945 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
SPG7-205ENST00000561945 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
SPG7-205ENST00000561945 FBLN2P98095 1184 aa26.43■■□□□ 1.82
SPG7-205ENST00000561945 SYNJ2O15056 1496 aa26.4■■□□□ 1.82
SPG7-205ENST00000561945 PBRM1Q86U86 1689 aa26.4■■□□□ 1.82
SPG7-205ENST00000561945 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
SPG7-205ENST00000561945 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.82
SPG7-205ENST00000561945 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.81
SPG7-205ENST00000561945 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
SPG7-205ENST00000561945 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
SPG7-205ENST00000561945 CHMP7Q8WUX9 453 aaPredicted RBP26.32■■□□□ 1.8
SPG7-205ENST00000561945 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
SPG7-205ENST00000561945 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
SPG7-205ENST00000561945 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
SPG7-205ENST00000561945 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
SPG7-205ENST00000561945 ADAMTS12P58397 1594 aa26.14■■□□□ 1.78
SPG7-205ENST00000561945 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
SPG7-205ENST00000561945 NUP160Q12769 1436 aa26.08■■□□□ 1.77
SPG7-205ENST00000561945 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
SPG7-205ENST00000561945 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
SPG7-205ENST00000561945 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
SPG7-205ENST00000561945 TRHP20396 242 aaPredicted RBP26.03■■□□□ 1.76
SPG7-205ENST00000561945 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
SPG7-205ENST00000561945 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
SPG7-205ENST00000561945 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
SPG7-205ENST00000561945 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
SPG7-205ENST00000561945 JPH4Q96JJ6 628 aa25.7■■□□□ 1.7
SPG7-205ENST00000561945 CUL7Q14999 1698 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms