RNA–Protein interactions for RNA: ENST00000319380.11

UBE2O-201, Transcript of ubiquitin conjugating enzyme E2 O, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2O, Length 5,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2O-201ENST00000319380 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
UBE2O-201ENST00000319380 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
UBE2O-201ENST00000319380 PELP1Q8IZL8 1130 aaKnown RBP28.31■■■□□ 2.12
UBE2O-201ENST00000319380 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
UBE2O-201ENST00000319380 EHMT2Q96KQ7 1210 aa27.74■■■□□ 2.03
UBE2O-201ENST00000319380 APLP2Q06481 763 aa27.71■■■□□ 2.03
UBE2O-201ENST00000319380 FAM9AQ8IZU1 332 aaPredicted RBP27.53■■■□□ 2
UBE2O-201ENST00000319380 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
UBE2O-201ENST00000319380 ERICH6Q7L0X2 663 aa27.11■■□□□ 1.93
UBE2O-201ENST00000319380 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
UBE2O-201ENST00000319380 TTBK1Q5TCY1 1321 aaPredicted RBP26.85■■□□□ 1.89
UBE2O-201ENST00000319380 CENPBP07199 599 aaPredicted RBP26.75■■□□□ 1.87
UBE2O-201ENST00000319380 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.86
UBE2O-201ENST00000319380 ATP1B4Q9UN42 357 aaPredicted RBP26.59■■□□□ 1.85
UBE2O-201ENST00000319380 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.85
UBE2O-201ENST00000319380 NEFLP07196 543 aa26.46■■□□□ 1.83
UBE2O-201ENST00000319380 ZEB1P37275 1124 aaPredicted RBP26.42■■□□□ 1.82
UBE2O-201ENST00000319380 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
UBE2O-201ENST00000319380 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
UBE2O-201ENST00000319380 YTHDC1Q96MU7 727 aaKnown RBP25.98■■□□□ 1.75
UBE2O-201ENST00000319380 DAXXQ9UER7 740 aaPredicted RBP25.98■■□□□ 1.75
UBE2O-201ENST00000319380 MYT1Q01538 1121 aa25.94■■□□□ 1.74
UBE2O-201ENST00000319380 MYT1LQ9UL68 1186 aa25.88■■□□□ 1.73
UBE2O-201ENST00000319380 POLR3GLQ9BT43 218 aa25.69■■□□□ 1.7
UBE2O-201ENST00000319380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
UBE2O-201ENST00000319380 HNRNPUL2Q1KMD3 747 aaKnown RBP25.65■■□□□ 1.7
UBE2O-201ENST00000319380 ITGAEP38570 1179 aa25.46■■□□□ 1.67
UBE2O-201ENST00000319380 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
UBE2O-201ENST00000319380 SLC4A1APQ9BWU0 796 aaKnown RBP25.38■■□□□ 1.65
UBE2O-201ENST00000319380 CNGB1Q14028 1251 aaPredicted RBP25.34■■□□□ 1.65
UBE2O-201ENST00000319380 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
UBE2O-201ENST00000319380 CLSPNQ9HAW4 1339 aa25.29■■□□□ 1.64
UBE2O-201ENST00000319380 ZNF316A6NFI3 1004 aaPredicted RBP25.25■■□□□ 1.63
UBE2O-201ENST00000319380 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
UBE2O-201ENST00000319380 RTL5Q5HYW3 569 aaPredicted RBP25.2■■□□□ 1.62
UBE2O-201ENST00000319380 HRCP23327 699 aa25.03■■□□□ 1.6
UBE2O-201ENST00000319380 ZBTB47Q9UFB7 747 aaPredicted RBP24.91■■□□□ 1.58
UBE2O-201ENST00000319380 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
UBE2O-201ENST00000319380 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
UBE2O-201ENST00000319380 SLC24A1O60721 1099 aa24.64■■□□□ 1.53
UBE2O-201ENST00000319380 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
UBE2O-201ENST00000319380 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
UBE2O-201ENST00000319380 NEFMP07197 916 aa24.57■■□□□ 1.52
UBE2O-201ENST00000319380 ZNF326Q5BKZ1 582 aaKnown RBP24.54■■□□□ 1.52
UBE2O-201ENST00000319380 CANXP27824 592 aaKnown RBP24.52■■□□□ 1.52
UBE2O-201ENST00000319380 NEUROD1Q13562 356 aa24.51■■□□□ 1.51
UBE2O-201ENST00000319380 BCL11AQ9H165 835 aa24.48■■□□□ 1.51
UBE2O-201ENST00000319380 ANP32CO43423 234 aa24.46■■□□□ 1.51
UBE2O-201ENST00000319380 CDK11AQ9UQ88 783 aaPredicted RBP24.45■■□□□ 1.5
UBE2O-201ENST00000319380 BCANQ96GW7 911 aa24.44■■□□□ 1.5
UBE2O-201ENST00000319380 FBLN2P98095 1184 aa24.27■■□□□ 1.48
UBE2O-201ENST00000319380 ANP32AP39687 249 aaKnown RBP24.14■■□□□ 1.46
UBE2O-201ENST00000319380 ANP32BQ92688 251 aaKnown RBP24.14■■□□□ 1.45
UBE2O-201ENST00000319380 ESF1Q9H501 851 aaKnown RBP24.12■■□□□ 1.45
UBE2O-201ENST00000319380 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
UBE2O-201ENST00000319380 HSP90AA1P07900 732 aaKnown RBP24.05■■□□□ 1.44
UBE2O-201ENST00000319380 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
UBE2O-201ENST00000319380 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
UBE2O-201ENST00000319380 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
UBE2O-201ENST00000319380 UPF2Q9HAU5 1272 aaKnown RBP23.93■■□□□ 1.42
UBE2O-201ENST00000319380 ZNF777Q9ULD5 760 aaPredicted RBP23.92■■□□□ 1.42
UBE2O-201ENST00000319380 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.42
UBE2O-201ENST00000319380 ARID3CA6NKF2 412 aa23.9■■□□□ 1.42
UBE2O-201ENST00000319380 CHGAP10645 457 aaKnown RBP23.85■■□□□ 1.41
UBE2O-201ENST00000319380 EIF5BO60841 1220 aaKnown RBP23.83■■□□□ 1.4
UBE2O-201ENST00000319380 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
UBE2O-201ENST00000319380 P3H3Q8IVL6 736 aa23.81■■□□□ 1.4
UBE2O-201ENST00000319380 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
UBE2O-201ENST00000319380 CDK11BP21127 795 aaKnown RBP23.74■■□□□ 1.39
UBE2O-201ENST00000319380 NPM1P06748 294 aaKnown RBP eCLIP23.7■■□□□ 1.38
UBE2O-201ENST00000319380 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.68■■□□□ 1.38
UBE2O-201ENST00000319380 ABCC9O60706 1549 aa23.66■■□□□ 1.38
UBE2O-201ENST00000319380 GLIPR1L2Q4G1C9 344 aa23.64■■□□□ 1.38
UBE2O-201ENST00000319380 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
UBE2O-201ENST00000319380 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.36
UBE2O-201ENST00000319380 FKBP8Q14318 412 aa23.56■■□□□ 1.36
UBE2O-201ENST00000319380 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
UBE2O-201ENST00000319380 A0A0G2JS52 829 aa23.54■■□□□ 1.36
UBE2O-201ENST00000319380 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
UBE2O-201ENST00000319380 FAM9BQ8IZU0 186 aa23.54■■□□□ 1.36
UBE2O-201ENST00000319380 SALL2Q9Y467 1007 aaPredicted RBP23.53■■□□□ 1.36
UBE2O-201ENST00000319380 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
UBE2O-201ENST00000319380 WDR43Q15061 677 aaKnown RBP eCLIP23.5■■□□□ 1.35
UBE2O-201ENST00000319380 TMC1Q8TDI8 760 aa23.5■■□□□ 1.35
UBE2O-201ENST00000319380 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
UBE2O-201ENST00000319380 CCDC136Q96JN2 1154 aa23.48■■□□□ 1.35
UBE2O-201ENST00000319380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.42■■□□□ 1.349e-7■■■□□ 16.3
UBE2O-201ENST00000319380 ARXQ96QS3 562 aa23.41■■□□□ 1.34
UBE2O-201ENST00000319380 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
UBE2O-201ENST00000319380 TSPY4P0CV99 314 aa23.33■■□□□ 1.32
UBE2O-201ENST00000319380 TSPY10P0CW01 314 aa23.33■■□□□ 1.32
UBE2O-201ENST00000319380 NCLP19338 710 aaKnown RBP23.33■■□□□ 1.32
UBE2O-201ENST00000319380 ZBTB7CA1YPR0 619 aa23.28■■□□□ 1.32
UBE2O-201ENST00000319380 NBR1Q14596 966 aa23.28■■□□□ 1.32
UBE2O-201ENST00000319380 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
UBE2O-201ENST00000319380 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
UBE2O-201ENST00000319380 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
UBE2O-201ENST00000319380 KDM2AQ9Y2K7 1162 aa23.25■■□□□ 1.31
UBE2O-201ENST00000319380 ZRSR1Q15695 479 aaKnown RBP23.22■■□□□ 1.31
UBE2O-201ENST00000319380 PPP1R15AO75807 674 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms