RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 NISCHQ9Y2I1 1504 aa45.75■■■■■ 4.92
TTC39B-204ENST00000505732 CCDC180Q9P1Z9 1646 aa39.41■■■■□ 3.9
TTC39B-204ENST00000505732 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
TTC39B-204ENST00000505732 SHROOM4Q9ULL8 1493 aa38.05■■■■□ 3.68
TTC39B-204ENST00000505732 DCAF8L2P0C7V8 631 aa37.9■■■■□ 3.66
TTC39B-204ENST00000505732 DCAF1Q9Y4B6 1507 aa37.71■■■■□ 3.63
TTC39B-204ENST00000505732 ABCC9O60706 1549 aa37.01■■■■□ 3.52
TTC39B-204ENST00000505732 MYO15BQ96JP2 1530 aa36.99■■■■□ 3.51
TTC39B-204ENST00000505732 SUPT5HO00267 1087 aaKnown RBP36.94■■■■□ 3.5
TTC39B-204ENST00000505732 NACADO15069 1562 aa36.65■■■■□ 3.46
TTC39B-204ENST00000505732 SCRIBQ14160 1630 aa36.56■■■■□ 3.44
TTC39B-204ENST00000505732 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
TTC39B-204ENST00000505732 RSF1Q96T23 1441 aaPredicted RBP35.82■■■■□ 3.33
TTC39B-204ENST00000505732 CHIC1Q5VXU3 224 aa35.63■■■■□ 3.29
TTC39B-204ENST00000505732 CECR2Q9BXF3 1484 aa35.63■■■■□ 3.29
TTC39B-204ENST00000505732 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
TTC39B-204ENST00000505732 MROH2BQ7Z745 1585 aa35.45■■■■□ 3.26
TTC39B-204ENST00000505732 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
TTC39B-204ENST00000505732 WIZO95785 1651 aa35.17■■■■□ 3.22
TTC39B-204ENST00000505732 BICRAQ9NZM4 1560 aa35.16■■■■□ 3.22
TTC39B-204ENST00000505732 PABPN1Q86U42 306 aaKnown RBP eCLIP35.16■■■■□ 3.22
TTC39B-204ENST00000505732 SMARCA4P51532 1647 aa35■■■■□ 3.19
TTC39B-204ENST00000505732 TOP2AP11388 1531 aaKnown RBP34.74■■■■□ 3.15
TTC39B-204ENST00000505732 TRIM41Q8WV44 630 aa34.61■■■■□ 3.13
TTC39B-204ENST00000505732 CCDC88BA6NC98 1476 aa34.51■■■■□ 3.11
TTC39B-204ENST00000505732 PEG3Q9GZU2 1588 aa34.49■■■■□ 3.11
TTC39B-204ENST00000505732 SMARCA2P51531 1590 aa34.47■■■■□ 3.11
TTC39B-204ENST00000505732 LOC105371045A0A1W2PR82 267 aa34.41■■■■□ 3.1
TTC39B-204ENST00000505732 EIF4G1Q04637 1599 aaKnown RBP34.39■■■■□ 3.1
TTC39B-204ENST00000505732 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
TTC39B-204ENST00000505732 BAZ1BQ9UIG0 1483 aaKnown RBP34.17■■■■□ 3.06
TTC39B-204ENST00000505732 FAM9AQ8IZU1 332 aaPredicted RBP34.12■■■■□ 3.05
TTC39B-204ENST00000505732 ABCC8Q09428 1581 aa34.01■■■■□ 3.04
TTC39B-204ENST00000505732 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
TTC39B-204ENST00000505732 HMGXB3Q12766 1538 aa33.82■■■■□ 3
TTC39B-204ENST00000505732 EHMT2Q96KQ7 1210 aa33.7■■■□□ 2.99
TTC39B-204ENST00000505732 WRNQ14191 1432 aaPredicted RBP eCLIP33.68■■■□□ 2.98
TTC39B-204ENST00000505732 SOGA1O94964 1423 aa33.56■■■□□ 2.96
TTC39B-204ENST00000505732 SYNJ1O43426 1573 aa33.49■■■□□ 2.95
TTC39B-204ENST00000505732 PCGF6Q9BYE7 350 aa33.49■■■□□ 2.95
TTC39B-204ENST00000505732 EEA1Q15075 1411 aa33.44■■■□□ 2.94
TTC39B-204ENST00000505732 RUSC2Q8N2Y8 1516 aa33.41■■■□□ 2.94
TTC39B-204ENST00000505732 CC2D2AQ9P2K1 1620 aa33.4■■■□□ 2.94
TTC39B-204ENST00000505732 CSRNP3Q8WYN3 585 aa33.37■■■□□ 2.93
TTC39B-204ENST00000505732 CFTRP13569 1480 aa33.34■■■□□ 2.93
TTC39B-204ENST00000505732 TOP2BQ02880 1626 aa33.24■■■□□ 2.91
TTC39B-204ENST00000505732 TRIM26Q12899 539 aaPredicted RBP33.22■■■□□ 2.91
TTC39B-204ENST00000505732 BIVM-ERCC5R4GMW8 1640 aa33.15■■■□□ 2.9
TTC39B-204ENST00000505732 CADPSQ9ULU8 1353 aa33.14■■■□□ 2.89
TTC39B-204ENST00000505732 TNIKQ9UKE5 1360 aa33.12■■■□□ 2.89
TTC39B-204ENST00000505732 CUX1P39880 1505 aa33.07■■■□□ 2.88
TTC39B-204ENST00000505732 GOLGA3Q08378 1498 aa33.07■■■□□ 2.88
TTC39B-204ENST00000505732 UBTFP17480 764 aaKnown RBP33.07■■■□□ 2.88
TTC39B-204ENST00000505732 CEP162Q5TB80 1403 aa33.03■■■□□ 2.88
TTC39B-204ENST00000505732 PRDM2Q13029 1718 aa33■■■□□ 2.87
TTC39B-204ENST00000505732 CEP164Q9UPV0 1460 aa33■■■□□ 2.87
TTC39B-204ENST00000505732 HRCP23327 699 aa32.96■■■□□ 2.87
TTC39B-204ENST00000505732 KIF21BO75037 1637 aa32.95■■■□□ 2.87
TTC39B-204ENST00000505732 RAPGEF2Q9Y4G8 1499 aa32.8■■■□□ 2.84
TTC39B-204ENST00000505732 PPARGC1BQ86YN6 1023 aaKnown RBP32.8■■■□□ 2.84
TTC39B-204ENST00000505732 FANCD2Q9BXW9 1451 aa32.76■■■□□ 2.84
TTC39B-204ENST00000505732 KIF27Q86VH2 1401 aa32.76■■■□□ 2.83
TTC39B-204ENST00000505732 NESP48681 1621 aa32.7■■■□□ 2.83
TTC39B-204ENST00000505732 PRXQ9BXM0 1461 aa32.69■■■□□ 2.82
TTC39B-204ENST00000505732 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
TTC39B-204ENST00000505732 CLIP1P30622 1438 aa32.62■■■□□ 2.81
TTC39B-204ENST00000505732 FGD5Q6ZNL6 1462 aa32.62■■■□□ 2.81
TTC39B-204ENST00000505732 ERICH3Q5RHP9 1530 aa32.62■■■□□ 2.81
TTC39B-204ENST00000505732 LAMC3Q9Y6N6 1575 aa32.57■■■□□ 2.8
TTC39B-204ENST00000505732 CUX2O14529 1486 aa32.56■■■□□ 2.8
TTC39B-204ENST00000505732 DNMBPQ6XZF7 1577 aa32.49■■■□□ 2.79
TTC39B-204ENST00000505732 IGF1RP08069 1367 aa32.47■■■□□ 2.79
TTC39B-204ENST00000505732 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
TTC39B-204ENST00000505732 RANGAP1P46060 587 aaPredicted RBP32.46■■■□□ 2.79
TTC39B-204ENST00000505732 TTBK1Q5TCY1 1321 aaPredicted RBP32.4■■■□□ 2.78
TTC39B-204ENST00000505732 VPS8Q8N3P4 1428 aa32.39■■■□□ 2.78
TTC39B-204ENST00000505732 PDS5BQ9NTI5 1447 aa32.39■■■□□ 2.78
TTC39B-204ENST00000505732 POLA1P09884 1462 aaPredicted RBP32.37■■■□□ 2.77
TTC39B-204ENST00000505732 RAD54L2Q9Y4B4 1467 aa32.35■■■□□ 2.77
TTC39B-204ENST00000505732 URB2Q14146 1524 aaKnown RBP32.32■■■□□ 2.76
TTC39B-204ENST00000505732 CARMIL1Q5VZK9 1371 aa32.3■■■□□ 2.76
TTC39B-204ENST00000505732 ABCA10Q8WWZ4 1543 aa32.3■■■□□ 2.76
TTC39B-204ENST00000505732 ARAP1Q96P48 1450 aa32.2■■■□□ 2.75
TTC39B-204ENST00000505732 APLP2Q06481 763 aa32.18■■■□□ 2.74
TTC39B-204ENST00000505732 KIF21AQ7Z4S6 1674 aa32.16■■■□□ 2.74
TTC39B-204ENST00000505732 ZEB1P37275 1124 aaPredicted RBP32.15■■■□□ 2.74
TTC39B-204ENST00000505732 ARHGAP35Q9NRY4 1499 aa32.09■■■□□ 2.73
TTC39B-204ENST00000505732 WDR97A6NE52 1622 aa32.03■■■□□ 2.72
TTC39B-204ENST00000505732 TDRD9Q8NDG6 1382 aaKnown RBP32.02■■■□□ 2.72
TTC39B-204ENST00000505732 CUL7Q14999 1698 aa31.96■■■□□ 2.71
TTC39B-204ENST00000505732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.93■■■□□ 2.7
TTC39B-204ENST00000505732 ABCA5Q8WWZ7 1642 aa31.93■■■□□ 2.7
TTC39B-204ENST00000505732 GAPVD1Q14C86 1478 aa31.93■■■□□ 2.7
TTC39B-204ENST00000505732 MRC2Q9UBG0 1479 aa31.91■■■□□ 2.7
TTC39B-204ENST00000505732 TARBP1Q13395 1621 aaKnown RBP31.87■■■□□ 2.69
TTC39B-204ENST00000505732 KANK4Q5T7N3 995 aaPredicted RBP31.84■■■□□ 2.69
TTC39B-204ENST00000505732 CCER1Q8TC90 406 aaPredicted RBP31.84■■■□□ 2.69
TTC39B-204ENST00000505732 P3H3Q8IVL6 736 aa31.74■■■□□ 2.67
TTC39B-204ENST00000505732 HNRNPUL2Q1KMD3 747 aaKnown RBP31.73■■■□□ 2.67
TTC39B-204ENST00000505732 CTTNBP2Q8WZ74 1663 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms