RNA–Protein interactions for RNA: ENST00000252934.9

ATXN10-201, Transcript of ataxin 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN10, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN10-201ENST00000252934 NISCHQ9Y2I1 1504 aa23.61■■□□□ 1.37
ATXN10-201ENST00000252934 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
ATXN10-201ENST00000252934 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
ATXN10-201ENST00000252934 HRCP23327 699 aa20.83■□□□□ 0.93
ATXN10-201ENST00000252934 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
ATXN10-201ENST00000252934 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
ATXN10-201ENST00000252934 SHROOM4Q9ULL8 1493 aa20.6■□□□□ 0.89
ATXN10-201ENST00000252934 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
ATXN10-201ENST00000252934 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
ATXN10-201ENST00000252934 ABCC9O60706 1549 aa20.18■□□□□ 0.82
ATXN10-201ENST00000252934 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
ATXN10-201ENST00000252934 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
ATXN10-201ENST00000252934 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
ATXN10-201ENST00000252934 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
ATXN10-201ENST00000252934 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
ATXN10-201ENST00000252934 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
ATXN10-201ENST00000252934 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
ATXN10-201ENST00000252934 NEUROD1Q13562 356 aa19.58■□□□□ 0.72
ATXN10-201ENST00000252934 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
ATXN10-201ENST00000252934 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
ATXN10-201ENST00000252934 NACADO15069 1562 aa19.42■□□□□ 0.7
ATXN10-201ENST00000252934 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
ATXN10-201ENST00000252934 FAM9AQ8IZU1 332 aaPredicted RBP19.39■□□□□ 0.69
ATXN10-201ENST00000252934 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
ATXN10-201ENST00000252934 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
ATXN10-201ENST00000252934 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.68
ATXN10-201ENST00000252934 MYT1Q01538 1121 aa19.33■□□□□ 0.68
ATXN10-201ENST00000252934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
ATXN10-201ENST00000252934 ZEB1P37275 1124 aaPredicted RBP19.16■□□□□ 0.66
ATXN10-201ENST00000252934 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
ATXN10-201ENST00000252934 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
ATXN10-201ENST00000252934 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
ATXN10-201ENST00000252934 DIEXFQ68CQ4 756 aaKnown RBP19.06■□□□□ 0.64
ATXN10-201ENST00000252934 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.64
ATXN10-201ENST00000252934 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
ATXN10-201ENST00000252934 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
ATXN10-201ENST00000252934 PRKCSHP14314 528 aaPredicted RBP18.8■□□□□ 0.6
ATXN10-201ENST00000252934 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
ATXN10-201ENST00000252934 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
ATXN10-201ENST00000252934 MIER1Q8N108 512 aa18.63■□□□□ 0.57
ATXN10-201ENST00000252934 BCANQ96GW7 911 aa18.59■□□□□ 0.57
ATXN10-201ENST00000252934 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
ATXN10-201ENST00000252934 RANGAP1P46060 587 aaPredicted RBP18.48■□□□□ 0.55
ATXN10-201ENST00000252934 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
ATXN10-201ENST00000252934 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
ATXN10-201ENST00000252934 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
ATXN10-201ENST00000252934 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
ATXN10-201ENST00000252934 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
ATXN10-201ENST00000252934 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
ATXN10-201ENST00000252934 SUPT16HQ9Y5B9 1047 aaKnown RBP18.3■□□□□ 0.52
ATXN10-201ENST00000252934 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
ATXN10-201ENST00000252934 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
ATXN10-201ENST00000252934 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
ATXN10-201ENST00000252934 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
ATXN10-201ENST00000252934 SMARCA4P51532 1647 aa18.21■□□□□ 0.5
ATXN10-201ENST00000252934 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
ATXN10-201ENST00000252934 ITGAEP38570 1179 aa18.2■□□□□ 0.5
ATXN10-201ENST00000252934 CC2D2AQ9P2K1 1620 aa18.14■□□□□ 0.49
ATXN10-201ENST00000252934 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
ATXN10-201ENST00000252934 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
ATXN10-201ENST00000252934 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
ATXN10-201ENST00000252934 APLP2Q06481 763 aa18.06■□□□□ 0.48
ATXN10-201ENST00000252934 WIZO95785 1651 aa18.06■□□□□ 0.48
ATXN10-201ENST00000252934 FKBP8Q14318 412 aa18.04■□□□□ 0.48
ATXN10-201ENST00000252934 SMARCA2P51531 1590 aa18.02■□□□□ 0.47
ATXN10-201ENST00000252934 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
ATXN10-201ENST00000252934 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
ATXN10-201ENST00000252934 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
ATXN10-201ENST00000252934 UBTFP17480 764 aaKnown RBP17.92■□□□□ 0.46
ATXN10-201ENST00000252934 RBM19Q9Y4C8 960 aaKnown RBP17.91■□□□□ 0.46
ATXN10-201ENST00000252934 ANO8Q9HCE9 1232 aaPredicted RBP17.88■□□□□ 0.45
ATXN10-201ENST00000252934 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
ATXN10-201ENST00000252934 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
ATXN10-201ENST00000252934 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
ATXN10-201ENST00000252934 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
ATXN10-201ENST00000252934 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
ATXN10-201ENST00000252934 MSH5O43196 834 aa17.8■□□□□ 0.44
ATXN10-201ENST00000252934 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
ATXN10-201ENST00000252934 NBR1Q14596 966 aa17.77■□□□□ 0.44
ATXN10-201ENST00000252934 HIRIP3Q9BW71 556 aaPredicted RBP17.76■□□□□ 0.43
ATXN10-201ENST00000252934 NEFLP07196 543 aa17.74■□□□□ 0.43
ATXN10-201ENST00000252934 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
ATXN10-201ENST00000252934 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
ATXN10-201ENST00000252934 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
ATXN10-201ENST00000252934 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
ATXN10-201ENST00000252934 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
ATXN10-201ENST00000252934 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
ATXN10-201ENST00000252934 NESP48681 1621 aa17.55■□□□□ 0.4
ATXN10-201ENST00000252934 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
ATXN10-201ENST00000252934 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
ATXN10-201ENST00000252934 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
ATXN10-201ENST00000252934 CFTRP13569 1480 aa17.46■□□□□ 0.39
ATXN10-201ENST00000252934 ATP1B4Q9UN42 357 aaPredicted RBP17.45■□□□□ 0.38
ATXN10-201ENST00000252934 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
ATXN10-201ENST00000252934 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
ATXN10-201ENST00000252934 IL27Q8NEV9 243 aa17.42■□□□□ 0.38
ATXN10-201ENST00000252934 CLSPNQ9HAW4 1339 aa17.42■□□□□ 0.38
ATXN10-201ENST00000252934 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
ATXN10-201ENST00000252934 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.37
ATXN10-201ENST00000252934 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms