RNA–Protein interactions for RNA: ENST00000512701.6

TTC39B-208, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TTC39B, Length 10,483 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-208ENST00000512701 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
TTC39B-208ENST00000512701 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
TTC39B-208ENST00000512701 SUPT5HO00267 1087 aaKnown RBP12.72□□□□□ -0.37
TTC39B-208ENST00000512701 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
TTC39B-208ENST00000512701 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
TTC39B-208ENST00000512701 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
TTC39B-208ENST00000512701 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
TTC39B-208ENST00000512701 FAM9AQ8IZU1 332 aaPredicted RBP12.14□□□□□ -0.47
TTC39B-208ENST00000512701 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
TTC39B-208ENST00000512701 ERICH6Q7L0X2 663 aa12.05□□□□□ -0.48
TTC39B-208ENST00000512701 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
TTC39B-208ENST00000512701 MYT1Q01538 1121 aa11.99□□□□□ -0.49
TTC39B-208ENST00000512701 PPARGC1BQ86YN6 1023 aaKnown RBP11.89□□□□□ -0.51
TTC39B-208ENST00000512701 CENPBP07199 599 aaPredicted RBP11.88□□□□□ -0.51
TTC39B-208ENST00000512701 APLP2Q06481 763 aa11.83□□□□□ -0.52
TTC39B-208ENST00000512701 CCER1Q8TC90 406 aaPredicted RBP11.83□□□□□ -0.52
TTC39B-208ENST00000512701 ATP1B4Q9UN42 357 aaPredicted RBP11.63□□□□□ -0.55
TTC39B-208ENST00000512701 NEFLP07196 543 aa11.61□□□□□ -0.55
TTC39B-208ENST00000512701 NISCHQ9Y2I1 1504 aa11.58□□□□□ -0.56
TTC39B-208ENST00000512701 CNGB1Q14028 1251 aaPredicted RBP11.58□□□□□ -0.56
TTC39B-208ENST00000512701 ZEB1P37275 1124 aaPredicted RBP11.57□□□□□ -0.56
TTC39B-208ENST00000512701 HRCP23327 699 aa11.53□□□□□ -0.56
TTC39B-208ENST00000512701 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
TTC39B-208ENST00000512701 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
TTC39B-208ENST00000512701 POLR3GLQ9BT43 218 aa11.45□□□□□ -0.58
TTC39B-208ENST00000512701 BCANQ96GW7 911 aa11.43□□□□□ -0.58
TTC39B-208ENST00000512701 ITGAEP38570 1179 aa11.41□□□□□ -0.58
TTC39B-208ENST00000512701 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
TTC39B-208ENST00000512701 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
TTC39B-208ENST00000512701 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
TTC39B-208ENST00000512701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
TTC39B-208ENST00000512701 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
TTC39B-208ENST00000512701 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
TTC39B-208ENST00000512701 DIEXFQ68CQ4 756 aaKnown RBP11.21□□□□□ -0.61
TTC39B-208ENST00000512701 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
TTC39B-208ENST00000512701 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
TTC39B-208ENST00000512701 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
TTC39B-208ENST00000512701 BCL11AQ9H165 835 aa11.1□□□□□ -0.63
TTC39B-208ENST00000512701 CLSPNQ9HAW4 1339 aa11.08□□□□□ -0.63
TTC39B-208ENST00000512701 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
TTC39B-208ENST00000512701 NEUROD1Q13562 356 aa11.02□□□□□ -0.65
TTC39B-208ENST00000512701 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
TTC39B-208ENST00000512701 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
TTC39B-208ENST00000512701 NPM2Q86SE8 214 aaKnown RBP10.98□□□□□ -0.65
TTC39B-208ENST00000512701 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
TTC39B-208ENST00000512701 ZNF326Q5BKZ1 582 aaKnown RBP10.91□□□□□ -0.66
TTC39B-208ENST00000512701 FAM50AQ14320 339 aaKnown RBP10.9□□□□□ -0.67
TTC39B-208ENST00000512701 CDK11AQ9UQ88 783 aaPredicted RBP10.9□□□□□ -0.67
TTC39B-208ENST00000512701 NBR1Q14596 966 aa10.88□□□□□ -0.67
TTC39B-208ENST00000512701 ARXQ96QS3 562 aa10.87□□□□□ -0.67
TTC39B-208ENST00000512701 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
TTC39B-208ENST00000512701 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
TTC39B-208ENST00000512701 FKBP8Q14318 412 aa10.81□□□□□ -0.68
TTC39B-208ENST00000512701 ANP32CO43423 234 aa10.78□□□□□ -0.68
TTC39B-208ENST00000512701 IRX6P78412 446 aaPredicted RBP10.77□□□□□ -0.69
TTC39B-208ENST00000512701 CANXP27824 592 aaKnown RBP10.73□□□□□ -0.69
TTC39B-208ENST00000512701 PLPPR3Q6T4P5 718 aa10.73□□□□□ -0.69
TTC39B-208ENST00000512701 ARID3CA6NKF2 412 aa10.72□□□□□ -0.69
TTC39B-208ENST00000512701 ANP32AP39687 249 aaKnown RBP10.72□□□□□ -0.69
TTC39B-208ENST00000512701 SENP3-EIF4A1A0A087X0R7 540 aa10.71□□□□□ -0.69
TTC39B-208ENST00000512701 SLC24A1O60721 1099 aa10.71□□□□□ -0.7
TTC39B-208ENST00000512701 SENP3Q9H4L4 574 aaPredicted RBP10.7□□□□□ -0.7
TTC39B-208ENST00000512701 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
TTC39B-208ENST00000512701 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
TTC39B-208ENST00000512701 FAM9BQ8IZU0 186 aa10.61□□□□□ -0.71
TTC39B-208ENST00000512701 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
TTC39B-208ENST00000512701 P3H3Q8IVL6 736 aa10.6□□□□□ -0.71
TTC39B-208ENST00000512701 ZBTB47Q9UFB7 747 aaPredicted RBP10.59□□□□□ -0.71
TTC39B-208ENST00000512701 HNRNPUQ00839 825 aaKnown RBP eCLIP10.59□□□□□ -0.71
TTC39B-208ENST00000512701 DDX10Q13206 875 aaKnown RBP10.59□□□□□ -0.71
TTC39B-208ENST00000512701 MIER1Q8N108 512 aa10.57□□□□□ -0.72
TTC39B-208ENST00000512701 HSP90AA1P07900 732 aaKnown RBP10.52□□□□□ -0.73
TTC39B-208ENST00000512701 TPRNQ4KMQ1 711 aa10.5□□□□□ -0.73
TTC39B-208ENST00000512701 CCDC136Q96JN2 1154 aa10.47□□□□□ -0.73
TTC39B-208ENST00000512701 LAS1LQ9Y4W2 734 aaKnown RBP10.47□□□□□ -0.73
TTC39B-208ENST00000512701 GLIPR1L2Q4G1C9 344 aa10.46□□□□□ -0.73
TTC39B-208ENST00000512701 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
TTC39B-208ENST00000512701 ANP32BQ92688 251 aaKnown RBP10.45□□□□□ -0.74
TTC39B-208ENST00000512701 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
TTC39B-208ENST00000512701 ZNF777Q9ULD5 760 aaPredicted RBP10.44□□□□□ -0.74
TTC39B-208ENST00000512701 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
TTC39B-208ENST00000512701 ARID4BQ4LE39 1312 aaPredicted RBP10.42□□□□□ -0.74
TTC39B-208ENST00000512701 FBLN2P98095 1184 aa10.4□□□□□ -0.74
TTC39B-208ENST00000512701 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.39□□□□□ -0.75
TTC39B-208ENST00000512701 PLEKHG5O94827 1062 aa10.37□□□□□ -0.75
TTC39B-208ENST00000512701 CHIC2Q9UKJ5 165 aa10.36□□□□□ -0.75
TTC39B-208ENST00000512701 MRS2Q9HD23 443 aa10.36□□□□□ -0.75
TTC39B-208ENST00000512701 NAP1L5Q96NT1 182 aaPredicted RBP10.35□□□□□ -0.75
TTC39B-208ENST00000512701 ZBTB7CA1YPR0 619 aa10.34□□□□□ -0.75
TTC39B-208ENST00000512701 ARID3AQ99856 593 aa10.34□□□□□ -0.75
TTC39B-208ENST00000512701 UPF2Q9HAU5 1272 aaKnown RBP10.34□□□□□ -0.75
TTC39B-208ENST00000512701 TONSLQ96HA7 1378 aa10.34□□□□□ -0.75
TTC39B-208ENST00000512701 MYO15BQ96JP2 1530 aa10.32□□□□□ -0.76
TTC39B-208ENST00000512701 NCLP19338 710 aaKnown RBP10.32□□□□□ -0.76
TTC39B-208ENST00000512701 NEFMP07197 916 aa10.32□□□□□ -0.76
TTC39B-208ENST00000512701 CHGAP10645 457 aaKnown RBP10.31□□□□□ -0.76
TTC39B-208ENST00000512701 KDM2AQ9Y2K7 1162 aa10.31□□□□□ -0.76
TTC39B-208ENST00000512701 SUPT16HQ9Y5B9 1047 aaKnown RBP10.31□□□□□ -0.76
TTC39B-208ENST00000512701 TMC1Q8TDI8 760 aa10.28□□□□□ -0.76
TTC39B-208ENST00000512701 TAOK2Q9UL54 1235 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms