Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 AC091060.1-201ENST00000623524 1766 ntBASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 AC139795.1-202ENST00000500444 432 ntBASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 RAP2CP1-202ENST00000605179 643 ntBASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB11Q9Y5F2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
PCDHB11Q9Y5F2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.52■■□□□ 1.36
PCDHB11Q9Y5F2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCDHB11Q9Y5F2 AL451085.2-201ENST00000605085 799 ntBASIC23.52■■□□□ 1.36
PCDHB11Q9Y5F2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
PCDHB11Q9Y5F2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.51■■□□□ 1.35
PCDHB11Q9Y5F2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDHB11Q9Y5F2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB11Q9Y5F2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB11Q9Y5F2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB11Q9Y5F2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PCDHB11Q9Y5F2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDHB11Q9Y5F2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB11Q9Y5F2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB11Q9Y5F2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB11Q9Y5F2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PCDHB11Q9Y5F2 AC010980.1-201ENST00000587192 1142 ntBASIC23.49■■□□□ 1.35
PCDHB11Q9Y5F2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHB11Q9Y5F2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB11Q9Y5F2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHB11Q9Y5F2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHB11Q9Y5F2 YBX1P4-201ENST00000392794 808 ntBASIC23.48■■□□□ 1.35
PCDHB11Q9Y5F2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 AC018755.3-202ENST00000596210 929 ntBASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 MIR6765-201ENST00000614092 87 ntBASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 KRT8P33-201ENST00000508125 1423 ntBASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHB11Q9Y5F2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHB11Q9Y5F2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHB11Q9Y5F2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
PCDHB11Q9Y5F2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHB11Q9Y5F2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
PCDHB11Q9Y5F2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHB11Q9Y5F2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHB11Q9Y5F2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHB11Q9Y5F2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHB11Q9Y5F2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHB11Q9Y5F2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
PCDHB11Q9Y5F2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB11Q9Y5F2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.43■■□□□ 1.34
PCDHB11Q9Y5F2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB11Q9Y5F2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHB11Q9Y5F2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.43■■□□□ 1.34
PCDHB11Q9Y5F2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHB11Q9Y5F2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.42■■□□□ 1.34
PCDHB11Q9Y5F2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHB11Q9Y5F2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 AC145676.1-201ENST00000514988 2004 ntBASIC23.41■■□□□ 1.34
PCDHB11Q9Y5F2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB11Q9Y5F2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHB11Q9Y5F2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB11Q9Y5F2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB11Q9Y5F2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHB11Q9Y5F2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHB11Q9Y5F2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDHB11Q9Y5F2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.39■■□□□ 1.34
PCDHB11Q9Y5F2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.39■■□□□ 1.34
PCDHB11Q9Y5F2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB11Q9Y5F2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.39■■□□□ 1.33
PCDHB11Q9Y5F2 SPCS2P3-201ENST00000500401 656 ntBASIC23.39■■□□□ 1.33
PCDHB11Q9Y5F2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB11Q9Y5F2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB11Q9Y5F2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHB11Q9Y5F2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms