RNA–Protein interactions for RNA: ENST00000430589.1

AC055876.1-201, humanhuman

TSL 2 BASIC

Gene AC055876.1, Length 895 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-201ENST00000430589 NISCHQ9Y2I1 1504 aa58.33■■■■■ 6.93
AC055876.1-201ENST00000430589 ABCC9O60706 1549 aa52.73■■■■■ 6.03
AC055876.1-201ENST00000430589 CCDC180Q9P1Z9 1646 aa52.36■■■■■ 5.97
AC055876.1-201ENST00000430589 RB1CC1Q8TDY2 1594 aa50.06■■■■■ 5.6
AC055876.1-201ENST00000430589 DNAJC5BQ9UF47 199 aa49.66■■■■■ 5.54
AC055876.1-201ENST00000430589 NACADO15069 1562 aa49.66■■■■■ 5.54
AC055876.1-201ENST00000430589 DCAF8L2P0C7V8 631 aa49.63■■■■■ 5.54
AC055876.1-201ENST00000430589 PABPN1Q86U42 306 aaKnown RBP eCLIP49.15■■■■■ 5.46
AC055876.1-201ENST00000430589 MYO15BQ96JP2 1530 aa48.84■■■■■ 5.41
AC055876.1-201ENST00000430589 UNC13AQ9UPW8 1703 aa48.76■■■■■ 5.4
AC055876.1-201ENST00000430589 BICRAQ9NZM4 1560 aa48.5■■■■■ 5.35
AC055876.1-201ENST00000430589 ZCCHC6Q5VYS8 1495 aaKnown RBP48.25■■■■■ 5.31
AC055876.1-201ENST00000430589 DCAF1Q9Y4B6 1507 aa48.13■■■■■ 5.3
AC055876.1-201ENST00000430589 SHROOM4Q9ULL8 1493 aa47.9■■■■■ 5.26
AC055876.1-201ENST00000430589 SCRIBQ14160 1630 aa47.77■■■■■ 5.24
AC055876.1-201ENST00000430589 CC2D2AQ9P2K1 1620 aa47.56■■■■■ 5.2
AC055876.1-201ENST00000430589 CECR2Q9BXF3 1484 aa47.53■■■■■ 5.2
AC055876.1-201ENST00000430589 EIF4G1Q04637 1599 aaKnown RBP47.4■■■■■ 5.18
AC055876.1-201ENST00000430589 DNAJC5Q9H3Z4 198 aa45.86■■■■■ 4.93
AC055876.1-201ENST00000430589 NCAPD3P42695 1498 aa45.86■■■■■ 4.93
AC055876.1-201ENST00000430589 ATAD2BQ9ULI0 1458 aa45.68■■■■■ 4.9
AC055876.1-201ENST00000430589 ERCC6Q03468 1493 aa45.62■■■■■ 4.89
AC055876.1-201ENST00000430589 SMARCA2P51531 1590 aa45.55■■■■■ 4.88
AC055876.1-201ENST00000430589 CUX2O14529 1486 aa45.54■■■■■ 4.88
AC055876.1-201ENST00000430589 SMARCA4P51532 1647 aa45.52■■■■■ 4.88
AC055876.1-201ENST00000430589 HMGXB3Q12766 1538 aa45.43■■■■■ 4.86
AC055876.1-201ENST00000430589 BAZ1AQ9NRL2 1556 aaPredicted RBP45.32■■■■■ 4.85
AC055876.1-201ENST00000430589 BAZ1BQ9UIG0 1483 aaKnown RBP45.25■■■■■ 4.83
AC055876.1-201ENST00000430589 NESP48681 1621 aa45.19■■■■■ 4.82
AC055876.1-201ENST00000430589 PEG3Q9GZU2 1588 aa45.04■■■■■ 4.8
AC055876.1-201ENST00000430589 MROH2BQ7Z745 1585 aa44.93■■■■■ 4.78
AC055876.1-201ENST00000430589 LAMC3Q9Y6N6 1575 aa44.84■■■■■ 4.77
AC055876.1-201ENST00000430589 PDS5BQ9NTI5 1447 aa44.7■■■■■ 4.75
AC055876.1-201ENST00000430589 THOC2Q8NI27 1593 aaKnown RBP44.69■■■■■ 4.74
AC055876.1-201ENST00000430589 KIF21AQ7Z4S6 1674 aa44.52■■■■■ 4.72
AC055876.1-201ENST00000430589 CADPSQ9ULU8 1353 aa44.51■■■■■ 4.72
AC055876.1-201ENST00000430589 WIZO95785 1651 aa44.36■■■■■ 4.69
AC055876.1-201ENST00000430589 MRC2Q9UBG0 1479 aa44.25■■■■■ 4.67
AC055876.1-201ENST00000430589 WDR62O43379 1518 aa44.08■■■■■ 4.65
AC055876.1-201ENST00000430589 CEP164Q9UPV0 1460 aa44.05■■■■■ 4.64
AC055876.1-201ENST00000430589 FANCD2Q9BXW9 1451 aa43.97■■■■■ 4.63
AC055876.1-201ENST00000430589 RSF1Q96T23 1441 aaPredicted RBP43.96■■■■■ 4.63
AC055876.1-201ENST00000430589 CFTRP13569 1480 aa43.89■■■■■ 4.62
AC055876.1-201ENST00000430589 TRIM41Q8WV44 630 aa43.84■■■■■ 4.61
AC055876.1-201ENST00000430589 TOP2AP11388 1531 aaKnown RBP43.8■■■■■ 4.6
AC055876.1-201ENST00000430589 OSCARQ8IYS5 282 aa43.57■■■■■ 4.57
AC055876.1-201ENST00000430589 URB2Q14146 1524 aaKnown RBP43.57■■■■■ 4.56
AC055876.1-201ENST00000430589 CCDC88BA6NC98 1476 aa43.36■■■■■ 4.53
AC055876.1-201ENST00000430589 PRDM2Q13029 1718 aa43.3■■■■■ 4.52
AC055876.1-201ENST00000430589 IFT140Q96RY7 1462 aa43.18■■■■■ 4.5
AC055876.1-201ENST00000430589 ZNF608Q9ULD9 1512 aaPredicted RBP43.08■■■■■ 4.49
AC055876.1-201ENST00000430589 TOPBP1Q92547 1522 aa43.07■■■■■ 4.49
AC055876.1-201ENST00000430589 ABCC8Q09428 1581 aa43.05■■■■■ 4.48
AC055876.1-201ENST00000430589 DNMBPQ6XZF7 1577 aa42.88■■■■■ 4.45
AC055876.1-201ENST00000430589 RIMBP3CA6NJZ7 1639 aa42.82■■■■■ 4.45
AC055876.1-201ENST00000430589 RIMBP3BA6NNM3 1639 aa42.82■■■■■ 4.45
AC055876.1-201ENST00000430589 RIMBP3Q9UFD9 1639 aa42.82■■■■■ 4.45
AC055876.1-201ENST00000430589 EIF4G3O43432 1585 aaKnown RBP42.78■■■■■ 4.44
AC055876.1-201ENST00000430589 AQRO60306 1485 aaKnown RBP eCLIP42.72■■■■■ 4.43
AC055876.1-201ENST00000430589 ARHGEF11O15085 1522 aa42.7■■■■■ 4.43
AC055876.1-201ENST00000430589 FBLN2P98095 1184 aa42.66■■■■■ 4.42
AC055876.1-201ENST00000430589 TARBP1Q13395 1621 aaKnown RBP42.64■■■■■ 4.42
AC055876.1-201ENST00000430589 POLA1P09884 1462 aaPredicted RBP42.62■■■■■ 4.41
AC055876.1-201ENST00000430589 CYB5RLQ6IPT4 315 aa42.57■■■■■ 4.41
AC055876.1-201ENST00000430589 SOGA1O94964 1423 aa42.52■■■■■ 4.4
AC055876.1-201ENST00000430589 CHD1O14646 1710 aa42.5■■■■■ 4.39
AC055876.1-201ENST00000430589 RAD54L2Q9Y4B4 1467 aa42.49■■■■■ 4.39
AC055876.1-201ENST00000430589 TDRD9Q8NDG6 1382 aaKnown RBP42.46■■■■■ 4.39
AC055876.1-201ENST00000430589 FGD5Q6ZNL6 1462 aa42.33■■■■■ 4.37
AC055876.1-201ENST00000430589 CHMP7Q8WUX9 453 aaPredicted RBP42.28■■■■■ 4.36
AC055876.1-201ENST00000430589 SNAPC4Q5SXM2 1469 aa42.25■■■■■ 4.35
AC055876.1-201ENST00000430589 ARAP1Q96P48 1450 aa42.24■■■■■ 4.35
AC055876.1-201ENST00000430589 TRHP20396 242 aaPredicted RBP42.24■■■■■ 4.35
AC055876.1-201ENST00000430589 WDR97A6NE52 1622 aa42.24■■■■■ 4.35
AC055876.1-201ENST00000430589 CUX1P39880 1505 aa42.22■■■■■ 4.35
AC055876.1-201ENST00000430589 GRIN2BQ13224 1484 aa42.14■■■■■ 4.34
AC055876.1-201ENST00000430589 MAGI1Q96QZ7 1491 aaPredicted RBP42.14■■■■■ 4.34
AC055876.1-201ENST00000430589 SYNJ1O43426 1573 aa42.06■■■■■ 4.32
AC055876.1-201ENST00000430589 SUPT5HO00267 1087 aaKnown RBP42.03■■■■■ 4.32
AC055876.1-201ENST00000430589 CLASP1Q7Z460 1538 aa42.01■■■■■ 4.32
AC055876.1-201ENST00000430589 SYNJ2O15056 1496 aa42■■■■■ 4.31
AC055876.1-201ENST00000430589 GAPVD1Q14C86 1478 aa41.97■■■■■ 4.31
AC055876.1-201ENST00000430589 PBRM1Q86U86 1689 aa41.84■■■■■ 4.29
AC055876.1-201ENST00000430589 ABCA10Q8WWZ4 1543 aa41.83■■■■■ 4.29
AC055876.1-201ENST00000430589 WRNQ14191 1432 aaPredicted RBP eCLIP41.71■■■■■ 4.27
AC055876.1-201ENST00000430589 ABCA5Q8WWZ7 1642 aa41.71■■■■■ 4.27
AC055876.1-201ENST00000430589 GRIN2AQ12879 1464 aa41.56■■■■■ 4.24
AC055876.1-201ENST00000430589 TOP2BQ02880 1626 aa41.48■■■■■ 4.23
AC055876.1-201ENST00000430589 BIVM-ERCC5R4GMW8 1640 aa41.44■■■■■ 4.22
AC055876.1-201ENST00000430589 ADAMTS12P58397 1594 aa41.44■■■■■ 4.22
AC055876.1-201ENST00000430589 FHAD1B1AJZ9 1412 aa41.43■■■■■ 4.22
AC055876.1-201ENST00000430589 NUP160Q12769 1436 aa41.41■■■■■ 4.22
AC055876.1-201ENST00000430589 CEP170Q5SW79 1584 aa41.36■■■■■ 4.21
AC055876.1-201ENST00000430589 ERCC6L2Q5T890 1561 aa41.34■■■■■ 4.21
AC055876.1-201ENST00000430589 ERICH3Q5RHP9 1530 aa41.31■■■■■ 4.2
AC055876.1-201ENST00000430589 AEBP2Q6ZN18 517 aaPredicted RBP41.23■■■■■ 4.19
AC055876.1-201ENST00000430589 SHROOM2Q13796 1616 aa41.18■■■■■ 4.18
AC055876.1-201ENST00000430589 JPH4Q96JJ6 628 aa41.14■■■■■ 4.18
AC055876.1-201ENST00000430589 PRG4Q92954 1404 aaPredicted RBP41.11■■■■■ 4.17
AC055876.1-201ENST00000430589 NPM1P06748 294 aaKnown RBP eCLIP40.92■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms