Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
PCDHB11Q9Y5F2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
PCDHB11Q9Y5F2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.35■■■□□ 2.77
PCDHB11Q9Y5F2 AL356512.1-201ENST00000607453 1739 ntBASIC32.14■■■□□ 2.74
PCDHB11Q9Y5F2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
PCDHB11Q9Y5F2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCDHB11Q9Y5F2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCDHB11Q9Y5F2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
PCDHB11Q9Y5F2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.66■■■□□ 2.66
PCDHB11Q9Y5F2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.35■■■□□ 2.61
PCDHB11Q9Y5F2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHB11Q9Y5F2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.24■■■□□ 2.59
PCDHB11Q9Y5F2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.12■■■□□ 2.57
PCDHB11Q9Y5F2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
PCDHB11Q9Y5F2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.92■■■□□ 2.54
PCDHB11Q9Y5F2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
PCDHB11Q9Y5F2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHB11Q9Y5F2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
PCDHB11Q9Y5F2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHB11Q9Y5F2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.73■■■□□ 2.51
PCDHB11Q9Y5F2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.68■■■□□ 2.5
PCDHB11Q9Y5F2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHB11Q9Y5F2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDHB11Q9Y5F2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCDHB11Q9Y5F2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
PCDHB11Q9Y5F2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
PCDHB11Q9Y5F2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHB11Q9Y5F2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
PCDHB11Q9Y5F2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCDHB11Q9Y5F2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHB11Q9Y5F2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHB11Q9Y5F2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30■■■□□ 2.39
PCDHB11Q9Y5F2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCDHB11Q9Y5F2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCDHB11Q9Y5F2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.92■■■□□ 2.38
PCDHB11Q9Y5F2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.9■■■□□ 2.38
PCDHB11Q9Y5F2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHB11Q9Y5F2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHB11Q9Y5F2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHB11Q9Y5F2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.7■■■□□ 2.35
PCDHB11Q9Y5F2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PCDHB11Q9Y5F2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
PCDHB11Q9Y5F2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHB11Q9Y5F2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
PCDHB11Q9Y5F2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.51■■■□□ 2.32
PCDHB11Q9Y5F2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHB11Q9Y5F2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.49■■■□□ 2.31
PCDHB11Q9Y5F2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
PCDHB11Q9Y5F2 AC006077.2-201ENST00000623591 457 ntBASIC29.48■■■□□ 2.31
PCDHB11Q9Y5F2 ZNRF2P1-201ENST00000441407 443 ntBASIC29.46■■■□□ 2.31
PCDHB11Q9Y5F2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.44■■■□□ 2.3
PCDHB11Q9Y5F2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHB11Q9Y5F2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHB11Q9Y5F2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.41■■■□□ 2.3
PCDHB11Q9Y5F2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.38■■■□□ 2.29
PCDHB11Q9Y5F2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.35■■■□□ 2.29
PCDHB11Q9Y5F2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHB11Q9Y5F2 AC015813.7-201ENST00000623294 581 ntBASIC29.28■■■□□ 2.28
PCDHB11Q9Y5F2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHB11Q9Y5F2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHB11Q9Y5F2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHB11Q9Y5F2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHB11Q9Y5F2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHB11Q9Y5F2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
PCDHB11Q9Y5F2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.01■■■□□ 2.23
PCDHB11Q9Y5F2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
PCDHB11Q9Y5F2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.94■■■□□ 2.22
PCDHB11Q9Y5F2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
PCDHB11Q9Y5F2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHB11Q9Y5F2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.8■■■□□ 2.2
PCDHB11Q9Y5F2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.75■■■□□ 2.19
PCDHB11Q9Y5F2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHB11Q9Y5F2 AP002365.1-201ENST00000603448 772 ntBASIC28.7■■■□□ 2.18
PCDHB11Q9Y5F2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PCDHB11Q9Y5F2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.58■■■□□ 2.17
PCDHB11Q9Y5F2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHB11Q9Y5F2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHB11Q9Y5F2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHB11Q9Y5F2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHB11Q9Y5F2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHB11Q9Y5F2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHB11Q9Y5F2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PCDHB11Q9Y5F2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
PCDHB11Q9Y5F2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
PCDHB11Q9Y5F2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.51■■■□□ 2.15
PCDHB11Q9Y5F2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PCDHB11Q9Y5F2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDHB11Q9Y5F2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHB11Q9Y5F2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.43■■■□□ 2.14
PCDHB11Q9Y5F2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHB11Q9Y5F2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDHB11Q9Y5F2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.42■■■□□ 2.14
PCDHB11Q9Y5F2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
PCDHB11Q9Y5F2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.37■■■□□ 2.13
PCDHB11Q9Y5F2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHB11Q9Y5F2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDHB11Q9Y5F2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.34■■■□□ 2.13
PCDHB11Q9Y5F2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB11Q9Y5F2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.3■■■□□ 2.12
PCDHB11Q9Y5F2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms