Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 PKMYT1-202ENST00000382240 1991 ntTSL 221.64■■□□□ 1.057e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.56■■□□□ 1.047e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.27■■□□□ 17e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.92■□□□□ 0.947e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-223ENST00000598717 811 ntTSL 520.46■□□□□ 0.877e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-208ENST00000593738 302 ntTSL 320.04■□□□□ 0.87e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.767e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.71■□□□□ 0.757e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.6■□□□□ 0.737e-6■■□□□ 11.9
WDR3Q9UNX4 PKMYT1-220ENST00000576268 1091 ntTSL 319.2■□□□□ 0.667e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.85■□□□□ 0.617e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.67e-6■■□□□ 11.9
WDR3Q9UNX4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.57e-6■■□□□ 11.9
WDR3Q9UNX4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.95■□□□□ 0.462e-7■■□□□ 11.9
WDR3Q9UNX4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.397e-6■■□□□ 11.9
WDR3Q9UNX4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.377e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.367e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.247e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.227e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-214ENST00000589416 773 ntTSL 416.39■□□□□ 0.217e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-209ENST00000587941 533 ntTSL 216.37■□□□□ 0.217e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-207ENST00000587840 655 ntTSL 516.19■□□□□ 0.187e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-206ENST00000587505 791 ntTSL 515.91■□□□□ 0.147e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.047e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-213ENST00000600239 5565 ntTSL 215.29■□□□□ 0.047e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.017e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-212ENST00000598863 551 ntTSL 315.03■□□□□ -07e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-218ENST00000590009 953 ntTSL 514.53□□□□□ -0.087e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-209ENST00000597280 814 ntTSL 314.44□□□□□ -0.17e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.32□□□□□ -0.127e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-204ENST00000593795 747 ntTSL 514.27□□□□□ -0.137e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.157e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-213ENST00000589283 599 ntTSL 314.08□□□□□ -0.167e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.257e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC13.46□□□□□ -0.267e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-211ENST00000557726 621 ntTSL 313.29□□□□□ -0.287e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-207ENST00000554731 888 ntTSL 312.98□□□□□ -0.337e-6■■□□□ 11.9
WDR3Q9UNX4 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC12.5□□□□□ -0.412e-7■■□□□ 11.9
WDR3Q9UNX4 ILF3-208ENST00000587928 4230 ntTSL 211.76□□□□□ -0.537e-6■■□□□ 11.9
WDR3Q9UNX4 TIMM17A-201ENST00000367287 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.577e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC11.36□□□□□ -0.597e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-202ENST00000428130 1064 ntTSL 2 BASIC10.91□□□□□ -0.667e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-210ENST00000557331 553 ntTSL 410.7□□□□□ -0.77e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-209ENST00000557273 562 ntTSL 310.54□□□□□ -0.727e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)10.46□□□□□ -0.737e-6■■□□□ 11.9
WDR3Q9UNX4 SUGP2-206ENST00000594773 4169 ntTSL 210.37□□□□□ -0.757e-6■■□□□ 11.9
WDR3Q9UNX4 UGCG-204ENST00000490110 581 ntTSL 310.14□□□□□ -0.797e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.797e-6■■□□□ 11.9
WDR3Q9UNX4 ILF3-211ENST00000589052 637 ntTSL 59.74□□□□□ -0.857e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-205ENST00000553816 1163 ntTSL 28.64□□□□□ -1.037e-6■■□□□ 11.9
WDR3Q9UNX4 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC8.51□□□□□ -1.057e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.45□□□□□ -1.227e-6■■□□□ 11.9
WDR3Q9UNX4 TIMM17A-202ENST00000478378 821 ntTSL 37.15□□□□□ -1.267e-6■■□□□ 11.9
WDR3Q9UNX4 TOP2A-204ENST00000578412 882 ntTSL 25.09□□□□□ -1.597e-6■■□□□ 11.9
WDR3Q9UNX4 UGCG-205ENST00000495085 772 ntTSL 35.05□□□□□ -1.67e-6■■□□□ 11.9
WDR3Q9UNX4 RDH11-208ENST00000556692 801 ntTSL 23.95□□□□□ -1.787e-6■■□□□ 11.9
WDR3Q9UNX4 TOP2A-202ENST00000577541 420 ntTSL 23.89□□□□□ -1.797e-6■■□□□ 11.9
WDR3Q9UNX4 SRSF1-206ENST00000583741 1465 ntTSL 521.31■■□□□ 15e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.9■□□□□ 0.625e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.73■□□□□ 0.595e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.555e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.545e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.245e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-205ENST00000464053 1805 ntTSL 1 (best)16.4■□□□□ 0.225e-6■■□□□ 11.8
WDR3Q9UNX4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.045e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.35□□□□□ -0.115e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-202ENST00000578430 689 ntTSL 214.26□□□□□ -0.135e-6■■□□□ 11.8
WDR3Q9UNX4 SRSF1-204ENST00000581979 1720 ntTSL 1 (best)13.28□□□□□ -0.285e-6■■□□□ 11.8
WDR3Q9UNX4 OAZ1-205ENST00000589361 679 ntTSL 1 (best)16.92■□□□□ 0.35e-8■■□□□ 11.7
WDR3Q9UNX4 RN7SKP255-201ENST00000363442 313 ntBASIC14.13□□□□□ -0.152e-6■■□□□ 11.5
WDR3Q9UNX4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.953e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.713e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.683e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.593e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.543e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.543e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.163e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.163e-29■□□□□ 11.2
WDR3Q9UNX4 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.093e-29■□□□□ 11.2
WDR3Q9UNX4 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.113e-29■□□□□ 11.2
WDR3Q9UNX4 SDHAP2-201ENST00000455183 2001 ntBASIC19.54■□□□□ 0.723e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-207ENST00000429897 2131 ntTSL 218.86■□□□□ 0.613e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-201ENST00000414625 729 ntTSL 516.7■□□□□ 0.263e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-242ENST00000601648 745 ntTSL 314.79□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-313ENST00000628917 490 ntTSL 514.78□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.78□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-244ENST00000602127 749 ntTSL 514.78□□□□□ -0.043e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-217ENST00000451982 1161 ntTSL 514.31□□□□□ -0.123e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.16□□□□□ -0.143e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-276ENST00000626706 608 ntTSL 513.82□□□□□ -0.23e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.16□□□□□ -0.33e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-320ENST00000629823 869 ntTSL 512.74□□□□□ -0.373e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-212ENST00000445430 4208 ntTSL 1 (best) BASIC12.58□□□□□ -0.43e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-264ENST00000626089 792 ntTSL 512.46□□□□□ -0.413e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-297ENST00000627767 929 ntTSL 2 BASIC12.46□□□□□ -0.413e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-296ENST00000627718 510 ntTSL 511.72□□□□□ -0.533e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-230ENST00000597034 731 ntTSL 511.26□□□□□ -0.613e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-261ENST00000625882 484 ntTSL 59.63□□□□□ -0.873e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-290ENST00000627502 874 ntTSL 59.12□□□□□ -0.953e-8■□□□□ 11.1
WDR3Q9UNX4 LINC00969-246ENST00000608699 415 ntTSL 58.77□□□□□ -1.013e-8■□□□□ 11.1
Retrieved 100 of 1,750 protein–RNA pairs in 178.8 ms