RNA–Protein interactions for RNA: ENST00000587941.1

ILF3-209, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 2

Gene ILF3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-209ENST00000587941 NISCHQ9Y2I1 1504 aa35.09■■■■□ 3.21
ILF3-209ENST00000587941 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
ILF3-209ENST00000587941 ZCCHC6Q5VYS8 1495 aaKnown RBP29.53■■■□□ 2.32
ILF3-209ENST00000587941 ABCC9O60706 1549 aa29.25■■■□□ 2.27
ILF3-209ENST00000587941 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
ILF3-209ENST00000587941 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
ILF3-209ENST00000587941 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
ILF3-209ENST00000587941 NACADO15069 1562 aa28.48■■■□□ 2.15
ILF3-209ENST00000587941 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
ILF3-209ENST00000587941 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
ILF3-209ENST00000587941 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
ILF3-209ENST00000587941 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
ILF3-209ENST00000587941 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
ILF3-209ENST00000587941 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
ILF3-209ENST00000587941 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
ILF3-209ENST00000587941 RSF1Q96T23 1441 aaPredicted RBP27.22■■□□□ 1.95
ILF3-209ENST00000587941 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
ILF3-209ENST00000587941 BAZ1AQ9NRL2 1556 aaPredicted RBP27.07■■□□□ 1.92
ILF3-209ENST00000587941 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
ILF3-209ENST00000587941 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
ILF3-209ENST00000587941 WIZO95785 1651 aa26.79■■□□□ 1.88
ILF3-209ENST00000587941 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
ILF3-209ENST00000587941 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
ILF3-209ENST00000587941 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
ILF3-209ENST00000587941 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
ILF3-209ENST00000587941 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
ILF3-209ENST00000587941 ATAD2BQ9ULI0 1458 aa26.48■■□□□ 1.83
ILF3-209ENST00000587941 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
ILF3-209ENST00000587941 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
ILF3-209ENST00000587941 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
ILF3-209ENST00000587941 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
ILF3-209ENST00000587941 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
ILF3-209ENST00000587941 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
ILF3-209ENST00000587941 TRIM41Q8WV44 630 aa25.75■■□□□ 1.71
ILF3-209ENST00000587941 CFTRP13569 1480 aa25.71■■□□□ 1.71
ILF3-209ENST00000587941 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
ILF3-209ENST00000587941 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
ILF3-209ENST00000587941 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
ILF3-209ENST00000587941 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
ILF3-209ENST00000587941 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
ILF3-209ENST00000587941 LAMC3Q9Y6N6 1575 aa25.47■■□□□ 1.67
ILF3-209ENST00000587941 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
ILF3-209ENST00000587941 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
ILF3-209ENST00000587941 NESP48681 1621 aa25.41■■□□□ 1.66
ILF3-209ENST00000587941 EEA1Q15075 1411 aa25.34■■□□□ 1.65
ILF3-209ENST00000587941 CUX1P39880 1505 aa25.3■■□□□ 1.64
ILF3-209ENST00000587941 FANCD2Q9BXW9 1451 aa25.23■■□□□ 1.63
ILF3-209ENST00000587941 SOGA1O94964 1423 aa25.23■■□□□ 1.63
ILF3-209ENST00000587941 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
ILF3-209ENST00000587941 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
ILF3-209ENST00000587941 ERCC6Q03468 1493 aa25.2■■□□□ 1.62
ILF3-209ENST00000587941 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.62
ILF3-209ENST00000587941 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
ILF3-209ENST00000587941 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
ILF3-209ENST00000587941 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
ILF3-209ENST00000587941 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
ILF3-209ENST00000587941 CSRNP3Q8WYN3 585 aa25.05■■□□□ 1.6
ILF3-209ENST00000587941 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
ILF3-209ENST00000587941 TOPBP1Q92547 1522 aa25■■□□□ 1.59
ILF3-209ENST00000587941 KIF21BO75037 1637 aa24.99■■□□□ 1.59
ILF3-209ENST00000587941 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
ILF3-209ENST00000587941 MRC2Q9UBG0 1479 aa24.98■■□□□ 1.59
ILF3-209ENST00000587941 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
ILF3-209ENST00000587941 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
ILF3-209ENST00000587941 WDR62O43379 1518 aa24.91■■□□□ 1.58
ILF3-209ENST00000587941 GOLGA3Q08378 1498 aa24.9■■□□□ 1.58
ILF3-209ENST00000587941 TNIKQ9UKE5 1360 aa24.88■■□□□ 1.57
ILF3-209ENST00000587941 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
ILF3-209ENST00000587941 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
ILF3-209ENST00000587941 CUX2O14529 1486 aa24.84■■□□□ 1.57
ILF3-209ENST00000587941 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
ILF3-209ENST00000587941 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
ILF3-209ENST00000587941 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
ILF3-209ENST00000587941 RAPGEF2Q9Y4G8 1499 aa24.74■■□□□ 1.55
ILF3-209ENST00000587941 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
ILF3-209ENST00000587941 IGF1RP08069 1367 aa24.71■■□□□ 1.55
ILF3-209ENST00000587941 TARBP1Q13395 1621 aaKnown RBP24.67■■□□□ 1.54
ILF3-209ENST00000587941 CEP162Q5TB80 1403 aa24.67■■□□□ 1.54
ILF3-209ENST00000587941 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
ILF3-209ENST00000587941 EHMT2Q96KQ7 1210 aa24.63■■□□□ 1.53
ILF3-209ENST00000587941 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
ILF3-209ENST00000587941 CUL7Q14999 1698 aa24.55■■□□□ 1.52
ILF3-209ENST00000587941 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
ILF3-209ENST00000587941 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
ILF3-209ENST00000587941 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
ILF3-209ENST00000587941 CLIP1P30622 1438 aa24.46■■□□□ 1.51
ILF3-209ENST00000587941 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
ILF3-209ENST00000587941 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
ILF3-209ENST00000587941 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
ILF3-209ENST00000587941 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
ILF3-209ENST00000587941 GRIN2BQ13224 1484 aa24.33■■□□□ 1.49
ILF3-209ENST00000587941 VPS8Q8N3P4 1428 aa24.32■■□□□ 1.48
ILF3-209ENST00000587941 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.48
ILF3-209ENST00000587941 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
ILF3-209ENST00000587941 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
ILF3-209ENST00000587941 ARAP1Q96P48 1450 aa24.28■■□□□ 1.48
ILF3-209ENST00000587941 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
ILF3-209ENST00000587941 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
ILF3-209ENST00000587941 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
ILF3-209ENST00000587941 EFCAB5A4FU69 1503 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms