RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 NISCHQ9Y2I1 1504 aa25.76■■□□□ 1.71
RDH11-209ENST00000557273 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
RDH11-209ENST00000557273 ABCC9O60706 1549 aa23.2■■□□□ 1.3
RDH11-209ENST00000557273 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
RDH11-209ENST00000557273 NACADO15069 1562 aa21.97■■□□□ 1.11
RDH11-209ENST00000557273 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
RDH11-209ENST00000557273 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.06
RDH11-209ENST00000557273 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
RDH11-209ENST00000557273 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
RDH11-209ENST00000557273 PABPN1Q86U42 306 aaKnown RBP eCLIP21.51■■□□□ 1.03
RDH11-209ENST00000557273 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
RDH11-209ENST00000557273 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
RDH11-209ENST00000557273 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
RDH11-209ENST00000557273 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
RDH11-209ENST00000557273 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
RDH11-209ENST00000557273 CC2D2AQ9P2K1 1620 aa21.02■□□□□ 0.96
RDH11-209ENST00000557273 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
RDH11-209ENST00000557273 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
RDH11-209ENST00000557273 NCAPD3P42695 1498 aa20.27■□□□□ 0.84
RDH11-209ENST00000557273 DNAJC5Q9H3Z4 198 aa20.2■□□□□ 0.82
RDH11-209ENST00000557273 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
RDH11-209ENST00000557273 CUX2O14529 1486 aa20.15■□□□□ 0.82
RDH11-209ENST00000557273 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
RDH11-209ENST00000557273 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
RDH11-209ENST00000557273 SMARCA4P51532 1647 aa20.13■□□□□ 0.81
RDH11-209ENST00000557273 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
RDH11-209ENST00000557273 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
RDH11-209ENST00000557273 PEG3Q9GZU2 1588 aa20■□□□□ 0.79
RDH11-209ENST00000557273 BAZ1BQ9UIG0 1483 aaKnown RBP19.94■□□□□ 0.78
RDH11-209ENST00000557273 NESP48681 1621 aa19.91■□□□□ 0.78
RDH11-209ENST00000557273 LAMC3Q9Y6N6 1575 aa19.84■□□□□ 0.77
RDH11-209ENST00000557273 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
RDH11-209ENST00000557273 MROH2BQ7Z745 1585 aa19.81■□□□□ 0.76
RDH11-209ENST00000557273 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
RDH11-209ENST00000557273 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
RDH11-209ENST00000557273 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
RDH11-209ENST00000557273 WIZO95785 1651 aa19.56■□□□□ 0.72
RDH11-209ENST00000557273 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
RDH11-209ENST00000557273 WDR62O43379 1518 aa19.52■□□□□ 0.72
RDH11-209ENST00000557273 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
RDH11-209ENST00000557273 CFTRP13569 1480 aa19.39■□□□□ 0.69
RDH11-209ENST00000557273 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
RDH11-209ENST00000557273 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
RDH11-209ENST00000557273 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
RDH11-209ENST00000557273 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
RDH11-209ENST00000557273 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
RDH11-209ENST00000557273 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
RDH11-209ENST00000557273 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
RDH11-209ENST00000557273 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.64
RDH11-209ENST00000557273 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
RDH11-209ENST00000557273 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
RDH11-209ENST00000557273 ABCC8Q09428 1581 aa19■□□□□ 0.63
RDH11-209ENST00000557273 ZNF608Q9ULD9 1512 aaPredicted RBP18.99■□□□□ 0.63
RDH11-209ENST00000557273 DNMBPQ6XZF7 1577 aa18.95■□□□□ 0.62
RDH11-209ENST00000557273 RIMBP3CA6NJZ7 1639 aa18.93■□□□□ 0.62
RDH11-209ENST00000557273 RIMBP3BA6NNM3 1639 aa18.93■□□□□ 0.62
RDH11-209ENST00000557273 RIMBP3Q9UFD9 1639 aa18.93■□□□□ 0.62
RDH11-209ENST00000557273 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
RDH11-209ENST00000557273 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
RDH11-209ENST00000557273 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
RDH11-209ENST00000557273 CHD1O14646 1710 aa18.81■□□□□ 0.6
RDH11-209ENST00000557273 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
RDH11-209ENST00000557273 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.68e-7■■■■■ 28.7
RDH11-209ENST00000557273 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
RDH11-209ENST00000557273 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
RDH11-209ENST00000557273 SOGA1O94964 1423 aa18.67■□□□□ 0.58
RDH11-209ENST00000557273 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
RDH11-209ENST00000557273 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
RDH11-209ENST00000557273 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
RDH11-209ENST00000557273 CUX1P39880 1505 aa18.63■□□□□ 0.57
RDH11-209ENST00000557273 CYB5RLQ6IPT4 315 aa18.62■□□□□ 0.57
RDH11-209ENST00000557273 CLASP1Q7Z460 1538 aa18.61■□□□□ 0.57
RDH11-209ENST00000557273 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
RDH11-209ENST00000557273 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
RDH11-209ENST00000557273 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
RDH11-209ENST00000557273 FBLN2P98095 1184 aa18.59■□□□□ 0.57
RDH11-209ENST00000557273 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
RDH11-209ENST00000557273 GRIN2BQ13224 1484 aa18.57■□□□□ 0.56
RDH11-209ENST00000557273 SYNJ2O15056 1496 aa18.53■□□□□ 0.56
RDH11-209ENST00000557273 PBRM1Q86U86 1689 aa18.51■□□□□ 0.55
RDH11-209ENST00000557273 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
RDH11-209ENST00000557273 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
RDH11-209ENST00000557273 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
RDH11-209ENST00000557273 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
RDH11-209ENST00000557273 TRHP20396 242 aaPredicted RBP18.42■□□□□ 0.54
RDH11-209ENST00000557273 BIVM-ERCC5R4GMW8 1640 aa18.35■□□□□ 0.53
RDH11-209ENST00000557273 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
RDH11-209ENST00000557273 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
RDH11-209ENST00000557273 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
RDH11-209ENST00000557273 TOP2BQ02880 1626 aa18.33■□□□□ 0.52
RDH11-209ENST00000557273 NUP160Q12769 1436 aa18.31■□□□□ 0.52
RDH11-209ENST00000557273 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
RDH11-209ENST00000557273 SHROOM2Q13796 1616 aa18.27■□□□□ 0.51
RDH11-209ENST00000557273 ERICH3Q5RHP9 1530 aa18.26■□□□□ 0.51
RDH11-209ENST00000557273 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
RDH11-209ENST00000557273 SUPT5HO00267 1087 aaKnown RBP18.25■□□□□ 0.51
RDH11-209ENST00000557273 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
RDH11-209ENST00000557273 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.49
RDH11-209ENST00000557273 KIF13AQ9H1H9 1805 aa18.07■□□□□ 0.48
RDH11-209ENST00000557273 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms