RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 NISCHQ9Y2I1 1504 aa36.68■■■■□ 3.46
GYPC-202ENST00000356887 CCDC180Q9P1Z9 1646 aa31.94■■■□□ 2.7
GYPC-202ENST00000356887 SHROOM4Q9ULL8 1493 aa31.1■■■□□ 2.57
GYPC-202ENST00000356887 ZCCHC6Q5VYS8 1495 aaKnown RBP31.03■■■□□ 2.56
GYPC-202ENST00000356887 SUPT5HO00267 1087 aaKnown RBP30.54■■■□□ 2.48
GYPC-202ENST00000356887 ABCC9O60706 1549 aa30.38■■■□□ 2.45
GYPC-202ENST00000356887 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
GYPC-202ENST00000356887 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
GYPC-202ENST00000356887 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
GYPC-202ENST00000356887 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
GYPC-202ENST00000356887 NACADO15069 1562 aa29.76■■■□□ 2.35
GYPC-202ENST00000356887 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
GYPC-202ENST00000356887 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
GYPC-202ENST00000356887 UNC13AQ9UPW8 1703 aa29.07■■■□□ 2.24
GYPC-202ENST00000356887 RSF1Q96T23 1441 aaPredicted RBP29.02■■■□□ 2.24
GYPC-202ENST00000356887 HRCP23327 699 aa29■■■□□ 2.23
GYPC-202ENST00000356887 LOC105371045A0A1W2PR82 267 aa28.88■■■□□ 2.21
GYPC-202ENST00000356887 PCGF6Q9BYE7 350 aa28.86■■■□□ 2.21
GYPC-202ENST00000356887 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
GYPC-202ENST00000356887 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.17
GYPC-202ENST00000356887 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
GYPC-202ENST00000356887 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
GYPC-202ENST00000356887 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
GYPC-202ENST00000356887 TRIM26Q12899 539 aaPredicted RBP28.41■■■□□ 2.14
GYPC-202ENST00000356887 WIZO95785 1651 aa28.32■■■□□ 2.12
GYPC-202ENST00000356887 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
GYPC-202ENST00000356887 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
GYPC-202ENST00000356887 FAM9AQ8IZU1 332 aaPredicted RBP28.19■■■□□ 2.1
GYPC-202ENST00000356887 SMARCA4P51532 1647 aa28.14■■■□□ 2.09
GYPC-202ENST00000356887 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
GYPC-202ENST00000356887 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
GYPC-202ENST00000356887 EHMT2Q96KQ7 1210 aa27.86■■■□□ 2.05
GYPC-202ENST00000356887 ZEB1P37275 1124 aaPredicted RBP27.85■■■□□ 2.05
GYPC-202ENST00000356887 PELP1Q8IZL8 1130 aaKnown RBP27.83■■■□□ 2.05
GYPC-202ENST00000356887 CCDC88BA6NC98 1476 aa27.79■■■□□ 2.04
GYPC-202ENST00000356887 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
GYPC-202ENST00000356887 SMARCA2P51531 1590 aa27.76■■■□□ 2.03
GYPC-202ENST00000356887 ATAD2BQ9ULI0 1458 aa27.68■■■□□ 2.02
GYPC-202ENST00000356887 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
GYPC-202ENST00000356887 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
GYPC-202ENST00000356887 CC2D2AQ9P2K1 1620 aa27.5■■□□□ 1.99
GYPC-202ENST00000356887 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
GYPC-202ENST00000356887 SOGA1O94964 1423 aa27.43■■□□□ 1.98
GYPC-202ENST00000356887 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
GYPC-202ENST00000356887 WRNQ14191 1432 aaPredicted RBP eCLIP27.41■■□□□ 1.98
GYPC-202ENST00000356887 EEA1Q15075 1411 aa27.4■■□□□ 1.98
GYPC-202ENST00000356887 TNIKQ9UKE5 1360 aa27.35■■□□□ 1.97
GYPC-202ENST00000356887 CEP162Q5TB80 1403 aa27.34■■□□□ 1.97
GYPC-202ENST00000356887 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
GYPC-202ENST00000356887 MYT1Q01538 1121 aa27.3■■□□□ 1.96
GYPC-202ENST00000356887 RUSC2Q8N2Y8 1516 aa27.29■■□□□ 1.96
GYPC-202ENST00000356887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.17■■□□□ 1.94
GYPC-202ENST00000356887 GOLGA3Q08378 1498 aa27.16■■□□□ 1.94
GYPC-202ENST00000356887 UBTFP17480 764 aaKnown RBP27.13■■□□□ 1.93
GYPC-202ENST00000356887 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
GYPC-202ENST00000356887 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
GYPC-202ENST00000356887 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
GYPC-202ENST00000356887 KIF21BO75037 1637 aa27.01■■□□□ 1.91
GYPC-202ENST00000356887 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
GYPC-202ENST00000356887 TTBK1Q5TCY1 1321 aaPredicted RBP26.99■■□□□ 1.91
GYPC-202ENST00000356887 CLIP1P30622 1438 aa26.83■■□□□ 1.89
GYPC-202ENST00000356887 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
GYPC-202ENST00000356887 CFTRP13569 1480 aa26.8■■□□□ 1.88
GYPC-202ENST00000356887 RAPGEF2Q9Y4G8 1499 aa26.77■■□□□ 1.88
GYPC-202ENST00000356887 PRDM2Q13029 1718 aa26.75■■□□□ 1.87
GYPC-202ENST00000356887 VPS8Q8N3P4 1428 aa26.75■■□□□ 1.87
GYPC-202ENST00000356887 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
GYPC-202ENST00000356887 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
GYPC-202ENST00000356887 SCAF1Q9H7N4 1312 aaKnown RBP26.68■■□□□ 1.86
GYPC-202ENST00000356887 DIEXFQ68CQ4 756 aaKnown RBP26.64■■□□□ 1.85
GYPC-202ENST00000356887 NESP48681 1621 aa26.63■■□□□ 1.85
GYPC-202ENST00000356887 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
GYPC-202ENST00000356887 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
GYPC-202ENST00000356887 PRXQ9BXM0 1461 aa26.57■■□□□ 1.84
GYPC-202ENST00000356887 APLP2Q06481 763 aa26.55■■□□□ 1.84
GYPC-202ENST00000356887 HNRNPUL2Q1KMD3 747 aaKnown RBP26.54■■□□□ 1.84
GYPC-202ENST00000356887 CUX1P39880 1505 aa26.52■■□□□ 1.84
GYPC-202ENST00000356887 ZNF316A6NFI3 1004 aaPredicted RBP26.48■■□□□ 1.83
GYPC-202ENST00000356887 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
GYPC-202ENST00000356887 ACIN1Q9UKV3 1341 aaKnown RBP26.47■■□□□ 1.83
GYPC-202ENST00000356887 RANGAP1P46060 587 aaPredicted RBP26.46■■□□□ 1.83
GYPC-202ENST00000356887 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
GYPC-202ENST00000356887 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
GYPC-202ENST00000356887 NEUROD1Q13562 356 aa26.39■■□□□ 1.82
GYPC-202ENST00000356887 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
GYPC-202ENST00000356887 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
GYPC-202ENST00000356887 CENPBP07199 599 aaPredicted RBP26.3■■□□□ 1.8
GYPC-202ENST00000356887 KANK4Q5T7N3 995 aaPredicted RBP26.24■■□□□ 1.79
GYPC-202ENST00000356887 DNMBPQ6XZF7 1577 aa26.21■■□□□ 1.79
GYPC-202ENST00000356887 ARHGAP35Q9NRY4 1499 aa26.18■■□□□ 1.78
GYPC-202ENST00000356887 CLSPNQ9HAW4 1339 aa26.18■■□□□ 1.78
GYPC-202ENST00000356887 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
GYPC-202ENST00000356887 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
GYPC-202ENST00000356887 RRBP1Q9P2E9 1410 aaKnown RBP26.16■■□□□ 1.78
GYPC-202ENST00000356887 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.77
GYPC-202ENST00000356887 IGF1RP08069 1367 aa26.13■■□□□ 1.77
GYPC-202ENST00000356887 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
GYPC-202ENST00000356887 CUX2O14529 1486 aa26.11■■□□□ 1.77
GYPC-202ENST00000356887 GTF3C3Q9Y5Q9 886 aa26.11■■□□□ 1.77
GYPC-202ENST00000356887 MIER1Q8N108 512 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms