RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 NISCHQ9Y2I1 1504 aa45.22■■■■■ 4.83
LTBP4-223ENST00000598717 CCDC180Q9P1Z9 1646 aa39.82■■■■□ 3.96
LTBP4-223ENST00000598717 ABCC9O60706 1549 aa38.33■■■■□ 3.73
LTBP4-223ENST00000598717 ZCCHC6Q5VYS8 1495 aaKnown RBP37.82■■■■□ 3.64
LTBP4-223ENST00000598717 DCAF8L2P0C7V8 631 aa37.66■■■■□ 3.62
LTBP4-223ENST00000598717 DCAF1Q9Y4B6 1507 aa37.42■■■■□ 3.58
LTBP4-223ENST00000598717 NACADO15069 1562 aa37.3■■■■□ 3.56
LTBP4-223ENST00000598717 MYO15BQ96JP2 1530 aa37.3■■■■□ 3.56
LTBP4-223ENST00000598717 RB1CC1Q8TDY2 1594 aa37.17■■■■□ 3.54
LTBP4-223ENST00000598717 SCRIBQ14160 1630 aa36.46■■■■□ 3.43
LTBP4-223ENST00000598717 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
LTBP4-223ENST00000598717 UNC13AQ9UPW8 1703 aa36.25■■■■□ 3.39
LTBP4-223ENST00000598717 PABPN1Q86U42 306 aaKnown RBP eCLIP36■■■■□ 3.35
LTBP4-223ENST00000598717 BICRAQ9NZM4 1560 aa35.96■■■■□ 3.35
LTBP4-223ENST00000598717 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
LTBP4-223ENST00000598717 BAZ1AQ9NRL2 1556 aaPredicted RBP35.01■■■■□ 3.2
LTBP4-223ENST00000598717 EIF4G1Q04637 1599 aaKnown RBP34.99■■■■□ 3.19
LTBP4-223ENST00000598717 SMARCA4P51532 1647 aa34.92■■■■□ 3.18
LTBP4-223ENST00000598717 MROH2BQ7Z745 1585 aa34.87■■■■□ 3.17
LTBP4-223ENST00000598717 RSF1Q96T23 1441 aaPredicted RBP34.76■■■■□ 3.16
LTBP4-223ENST00000598717 CC2D2AQ9P2K1 1620 aa34.66■■■■□ 3.14
LTBP4-223ENST00000598717 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
LTBP4-223ENST00000598717 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
LTBP4-223ENST00000598717 SMARCA2P51531 1590 aa34.55■■■■□ 3.12
LTBP4-223ENST00000598717 WIZO95785 1651 aa34.53■■■■□ 3.12
LTBP4-223ENST00000598717 PEG3Q9GZU2 1588 aa34.53■■■■□ 3.12
LTBP4-223ENST00000598717 DNAJC5BQ9UF47 199 aa34.47■■■■□ 3.11
LTBP4-223ENST00000598717 NCAPD3P42695 1498 aa34.42■■■■□ 3.1
LTBP4-223ENST00000598717 BAZ1BQ9UIG0 1483 aaKnown RBP34.34■■■■□ 3.09
LTBP4-223ENST00000598717 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
LTBP4-223ENST00000598717 TOP2AP11388 1531 aaKnown RBP34.21■■■■□ 3.07
LTBP4-223ENST00000598717 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
LTBP4-223ENST00000598717 CADPSQ9ULU8 1353 aa33.49■■■□□ 2.95
LTBP4-223ENST00000598717 CFTRP13569 1480 aa33.42■■■□□ 2.94
LTBP4-223ENST00000598717 LAMC3Q9Y6N6 1575 aa33.38■■■□□ 2.93
LTBP4-223ENST00000598717 NESP48681 1621 aa33.37■■■□□ 2.93
LTBP4-223ENST00000598717 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
LTBP4-223ENST00000598717 PRDM2Q13029 1718 aa33.16■■■□□ 2.9
LTBP4-223ENST00000598717 FANCD2Q9BXW9 1451 aa33.1■■■□□ 2.89
LTBP4-223ENST00000598717 ERCC6Q03468 1493 aa33.01■■■□□ 2.88
LTBP4-223ENST00000598717 CEP164Q9UPV0 1460 aa32.99■■■□□ 2.87
LTBP4-223ENST00000598717 KIF21AQ7Z4S6 1674 aa32.95■■■□□ 2.87
LTBP4-223ENST00000598717 ABCC8Q09428 1581 aa32.82■■■□□ 2.84
LTBP4-223ENST00000598717 WRNQ14191 1432 aaPredicted RBP eCLIP32.78■■■□□ 2.84
LTBP4-223ENST00000598717 MRC2Q9UBG0 1479 aa32.77■■■□□ 2.84
LTBP4-223ENST00000598717 URB2Q14146 1524 aaKnown RBP32.68■■■□□ 2.82
LTBP4-223ENST00000598717 CHIC1Q5VXU3 224 aa32.67■■■□□ 2.82
LTBP4-223ENST00000598717 CUX1P39880 1505 aa32.66■■■□□ 2.82
LTBP4-223ENST00000598717 DNMBPQ6XZF7 1577 aa32.66■■■□□ 2.82
LTBP4-223ENST00000598717 THOC2Q8NI27 1593 aaKnown RBP32.64■■■□□ 2.82
LTBP4-223ENST00000598717 TOPBP1Q92547 1522 aa32.63■■■□□ 2.81
LTBP4-223ENST00000598717 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
LTBP4-223ENST00000598717 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
LTBP4-223ENST00000598717 WDR62O43379 1518 aa32.6■■■□□ 2.81
LTBP4-223ENST00000598717 TOP2BQ02880 1626 aa32.58■■■□□ 2.81
LTBP4-223ENST00000598717 BIVM-ERCC5R4GMW8 1640 aa32.55■■■□□ 2.8
LTBP4-223ENST00000598717 FGD5Q6ZNL6 1462 aa32.46■■■□□ 2.79
LTBP4-223ENST00000598717 POLA1P09884 1462 aaPredicted RBP32.41■■■□□ 2.78
LTBP4-223ENST00000598717 SOGA1O94964 1423 aa32.34■■■□□ 2.77
LTBP4-223ENST00000598717 CUX2O14529 1486 aa32.32■■■□□ 2.76
LTBP4-223ENST00000598717 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
LTBP4-223ENST00000598717 IFT140Q96RY7 1462 aa32.26■■■□□ 2.75
LTBP4-223ENST00000598717 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
LTBP4-223ENST00000598717 ABCA10Q8WWZ4 1543 aa32.16■■■□□ 2.74
LTBP4-223ENST00000598717 WDR97A6NE52 1622 aa32.07■■■□□ 2.72
LTBP4-223ENST00000598717 TDRD9Q8NDG6 1382 aaKnown RBP32.07■■■□□ 2.72
LTBP4-223ENST00000598717 KIF27Q86VH2 1401 aa32.06■■■□□ 2.72
LTBP4-223ENST00000598717 ZNF608Q9ULD9 1512 aaPredicted RBP32.03■■■□□ 2.72
LTBP4-223ENST00000598717 AQRO60306 1485 aaKnown RBP eCLIP31.98■■■□□ 2.712e-7■■■■■ 30.4
LTBP4-223ENST00000598717 RUSC2Q8N2Y8 1516 aa31.96■■■□□ 2.71
LTBP4-223ENST00000598717 GAPVD1Q14C86 1478 aa31.96■■■□□ 2.71
LTBP4-223ENST00000598717 FAM9AQ8IZU1 332 aaPredicted RBP31.95■■■□□ 2.71
LTBP4-223ENST00000598717 EEA1Q15075 1411 aa31.94■■■□□ 2.7
LTBP4-223ENST00000598717 ABCA5Q8WWZ7 1642 aa31.93■■■□□ 2.7
LTBP4-223ENST00000598717 EIF4G3O43432 1585 aaKnown RBP31.92■■■□□ 2.7
LTBP4-223ENST00000598717 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
LTBP4-223ENST00000598717 CSRNP3Q8WYN3 585 aa31.83■■■□□ 2.69
LTBP4-223ENST00000598717 IGF1RP08069 1367 aa31.81■■■□□ 2.68
LTBP4-223ENST00000598717 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
LTBP4-223ENST00000598717 PBRM1Q86U86 1689 aa31.78■■■□□ 2.68
LTBP4-223ENST00000598717 SNAPC4Q5SXM2 1469 aa31.69■■■□□ 2.66
LTBP4-223ENST00000598717 CARMIL1Q5VZK9 1371 aa31.67■■■□□ 2.66
LTBP4-223ENST00000598717 MAGI1Q96QZ7 1491 aaPredicted RBP31.66■■■□□ 2.66
LTBP4-223ENST00000598717 CUL7Q14999 1698 aa31.65■■■□□ 2.66
LTBP4-223ENST00000598717 FHAD1B1AJZ9 1412 aa31.62■■■□□ 2.65
LTBP4-223ENST00000598717 ADAMTS12P58397 1594 aa31.59■■■□□ 2.65
LTBP4-223ENST00000598717 PRXQ9BXM0 1461 aa31.59■■■□□ 2.65
LTBP4-223ENST00000598717 CHMP7Q8WUX9 453 aaPredicted RBP31.56■■■□□ 2.64
LTBP4-223ENST00000598717 SYNJ2O15056 1496 aa31.54■■■□□ 2.64
LTBP4-223ENST00000598717 RAPGEF2Q9Y4G8 1499 aa31.54■■■□□ 2.64
LTBP4-223ENST00000598717 FBLN2P98095 1184 aa31.54■■■□□ 2.64
LTBP4-223ENST00000598717 KIF21BO75037 1637 aa31.5■■■□□ 2.63
LTBP4-223ENST00000598717 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
LTBP4-223ENST00000598717 GOLGA3Q08378 1498 aa31.43■■■□□ 2.62
LTBP4-223ENST00000598717 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
LTBP4-223ENST00000598717 UBTFP17480 764 aaKnown RBP31.37■■■□□ 2.61
LTBP4-223ENST00000598717 CHD1O14646 1710 aa31.36■■■□□ 2.61
LTBP4-223ENST00000598717 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
LTBP4-223ENST00000598717 NUP160Q12769 1436 aa31.24■■■□□ 2.59
LTBP4-223ENST00000598717 OSCARQ8IYS5 282 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms