RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
LTBP4-208ENST00000593738 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.29
LTBP4-208ENST00000593738 ABCC9O60706 1549 aa41.13■■■■■ 4.17
LTBP4-208ENST00000593738 RB1CC1Q8TDY2 1594 aa39.5■■■■□ 3.91
LTBP4-208ENST00000593738 NACADO15069 1562 aa39.4■■■■□ 3.9
LTBP4-208ENST00000593738 DCAF8L2P0C7V8 631 aa39.23■■■■□ 3.87
LTBP4-208ENST00000593738 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
LTBP4-208ENST00000593738 ZCCHC6Q5VYS8 1495 aaKnown RBP38.93■■■■□ 3.82
LTBP4-208ENST00000593738 DCAF1Q9Y4B6 1507 aa38.79■■■■□ 3.8
LTBP4-208ENST00000593738 UNC13AQ9UPW8 1703 aa38.58■■■■□ 3.77
LTBP4-208ENST00000593738 PABPN1Q86U42 306 aaKnown RBP eCLIP38.37■■■■□ 3.73
LTBP4-208ENST00000593738 BICRAQ9NZM4 1560 aa38.27■■■■□ 3.72
LTBP4-208ENST00000593738 SCRIBQ14160 1630 aa38.04■■■■□ 3.68
LTBP4-208ENST00000593738 DNAJC5BQ9UF47 199 aa38.02■■■■□ 3.68
LTBP4-208ENST00000593738 SHROOM4Q9ULL8 1493 aa37.93■■■■□ 3.66
LTBP4-208ENST00000593738 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
LTBP4-208ENST00000593738 CC2D2AQ9P2K1 1620 aa37.22■■■■□ 3.55
LTBP4-208ENST00000593738 CECR2Q9BXF3 1484 aa37.02■■■■□ 3.52
LTBP4-208ENST00000593738 SMARCA4P51532 1647 aa36.41■■■■□ 3.42
LTBP4-208ENST00000593738 NCAPD3P42695 1498 aa36.35■■■■□ 3.41
LTBP4-208ENST00000593738 BAZ1AQ9NRL2 1556 aaPredicted RBP36.34■■■■□ 3.41
LTBP4-208ENST00000593738 ATAD2BQ9ULI0 1458 aa36.29■■■■□ 3.4
LTBP4-208ENST00000593738 SMARCA2P51531 1590 aa36.26■■■■□ 3.39
LTBP4-208ENST00000593738 HMGXB3Q12766 1538 aa36.13■■■■□ 3.37
LTBP4-208ENST00000593738 PEG3Q9GZU2 1588 aa36.09■■■■□ 3.37
LTBP4-208ENST00000593738 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
LTBP4-208ENST00000593738 BAZ1BQ9UIG0 1483 aaKnown RBP35.98■■■■□ 3.35
LTBP4-208ENST00000593738 WIZO95785 1651 aa35.65■■■■□ 3.3
LTBP4-208ENST00000593738 RSF1Q96T23 1441 aaPredicted RBP35.55■■■■□ 3.28
LTBP4-208ENST00000593738 ERCC6Q03468 1493 aa35.5■■■■□ 3.27
LTBP4-208ENST00000593738 NESP48681 1621 aa35.49■■■■□ 3.27
LTBP4-208ENST00000593738 LAMC3Q9Y6N6 1575 aa35.44■■■■□ 3.26
LTBP4-208ENST00000593738 CUX2O14529 1486 aa35.29■■■■□ 3.24
LTBP4-208ENST00000593738 TOP2AP11388 1531 aaKnown RBP35.28■■■■□ 3.24
LTBP4-208ENST00000593738 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
LTBP4-208ENST00000593738 PDS5BQ9NTI5 1447 aa35.22■■■■□ 3.23
LTBP4-208ENST00000593738 KIF21AQ7Z4S6 1674 aa35.1■■■■□ 3.21
LTBP4-208ENST00000593738 THOC2Q8NI27 1593 aaKnown RBP35.05■■■■□ 3.2
LTBP4-208ENST00000593738 CFTRP13569 1480 aa34.97■■■■□ 3.19
LTBP4-208ENST00000593738 CCDC88BA6NC98 1476 aa34.86■■■■□ 3.17
LTBP4-208ENST00000593738 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
LTBP4-208ENST00000593738 FANCD2Q9BXW9 1451 aa34.83■■■■□ 3.17
LTBP4-208ENST00000593738 CEP164Q9UPV0 1460 aa34.83■■■■□ 3.17
LTBP4-208ENST00000593738 WDR62O43379 1518 aa34.73■■■■□ 3.15
LTBP4-208ENST00000593738 PRDM2Q13029 1718 aa34.72■■■■□ 3.15
LTBP4-208ENST00000593738 DNAJC5Q9H3Z4 198 aa34.57■■■■□ 3.12
LTBP4-208ENST00000593738 URB2Q14146 1524 aaKnown RBP34.48■■■■□ 3.11
LTBP4-208ENST00000593738 SUPT5HO00267 1087 aaKnown RBP34.39■■■■□ 3.1
LTBP4-208ENST00000593738 ABCC8Q09428 1581 aa34.3■■■■□ 3.08
LTBP4-208ENST00000593738 TOPBP1Q92547 1522 aa34.24■■■■□ 3.07
LTBP4-208ENST00000593738 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
LTBP4-208ENST00000593738 IFT140Q96RY7 1462 aa34.13■■■■□ 3.05
LTBP4-208ENST00000593738 ZNF608Q9ULD9 1512 aaPredicted RBP33.94■■■■□ 3.02
LTBP4-208ENST00000593738 POLA1P09884 1462 aaPredicted RBP33.92■■■■□ 3.02
LTBP4-208ENST00000593738 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
LTBP4-208ENST00000593738 CUX1P39880 1505 aa33.84■■■■□ 3.01
LTBP4-208ENST00000593738 EIF4G3O43432 1585 aaKnown RBP33.81■■■■□ 3
LTBP4-208ENST00000593738 SOGA1O94964 1423 aa33.8■■■■□ 3
LTBP4-208ENST00000593738 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
LTBP4-208ENST00000593738 OSCARQ8IYS5 282 aa33.78■■■■□ 3
LTBP4-208ENST00000593738 RAD54L2Q9Y4B4 1467 aa33.76■■■□□ 2.99
LTBP4-208ENST00000593738 AQRO60306 1485 aaKnown RBP eCLIP33.72■■■□□ 2.99
LTBP4-208ENST00000593738 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
LTBP4-208ENST00000593738 TDRD9Q8NDG6 1382 aaKnown RBP33.61■■■□□ 2.97
LTBP4-208ENST00000593738 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
LTBP4-208ENST00000593738 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
LTBP4-208ENST00000593738 TOP2BQ02880 1626 aa33.51■■■□□ 2.96
LTBP4-208ENST00000593738 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
LTBP4-208ENST00000593738 CHD1O14646 1710 aa33.46■■■□□ 2.95
LTBP4-208ENST00000593738 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
LTBP4-208ENST00000593738 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
LTBP4-208ENST00000593738 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
LTBP4-208ENST00000593738 SNAPC4Q5SXM2 1469 aa33.4■■■□□ 2.94
LTBP4-208ENST00000593738 MAGI1Q96QZ7 1491 aaPredicted RBP33.4■■■□□ 2.94
LTBP4-208ENST00000593738 FBLN2P98095 1184 aa33.39■■■□□ 2.94
LTBP4-208ENST00000593738 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
LTBP4-208ENST00000593738 PBRM1Q86U86 1689 aa33.35■■■□□ 2.93
LTBP4-208ENST00000593738 CHMP7Q8WUX9 453 aaPredicted RBP33.29■■■□□ 2.92
LTBP4-208ENST00000593738 SYNJ2O15056 1496 aa33.26■■■□□ 2.92
LTBP4-208ENST00000593738 TRIM41Q8WV44 630 aa33.23■■■□□ 2.91
LTBP4-208ENST00000593738 RIMBP3CA6NJZ7 1639 aa33.22■■■□□ 2.91
LTBP4-208ENST00000593738 RIMBP3BA6NNM3 1639 aa33.22■■■□□ 2.91
LTBP4-208ENST00000593738 RIMBP3Q9UFD9 1639 aa33.22■■■□□ 2.91
LTBP4-208ENST00000593738 ARHGEF11O15085 1522 aa33.18■■■□□ 2.9
LTBP4-208ENST00000593738 ERICH3Q5RHP9 1530 aa33.09■■■□□ 2.89
LTBP4-208ENST00000593738 CLASP1Q7Z460 1538 aa33.09■■■□□ 2.89
LTBP4-208ENST00000593738 ADAMTS12P58397 1594 aa33.04■■■□□ 2.88
LTBP4-208ENST00000593738 FHAD1B1AJZ9 1412 aa33.02■■■□□ 2.88
LTBP4-208ENST00000593738 GRIN2AQ12879 1464 aa33■■■□□ 2.87
LTBP4-208ENST00000593738 CYB5RLQ6IPT4 315 aa32.9■■■□□ 2.86
LTBP4-208ENST00000593738 KIF27Q86VH2 1401 aa32.88■■■□□ 2.85
LTBP4-208ENST00000593738 ARAP1Q96P48 1450 aa32.87■■■□□ 2.85
LTBP4-208ENST00000593738 NUP160Q12769 1436 aa32.87■■■□□ 2.85
LTBP4-208ENST00000593738 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
LTBP4-208ENST00000593738 IGF1RP08069 1367 aa32.78■■■□□ 2.84
LTBP4-208ENST00000593738 CUL7Q14999 1698 aa32.73■■■□□ 2.83
LTBP4-208ENST00000593738 SHROOM2Q13796 1616 aa32.67■■■□□ 2.82
LTBP4-208ENST00000593738 CARMIL1Q5VZK9 1371 aa32.58■■■□□ 2.81
LTBP4-208ENST00000593738 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
LTBP4-208ENST00000593738 JPH4Q96JJ6 628 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms