Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC12.21□□□□□ -0.455e-7■■■■□ 25.7
CSTF2P33240 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.915e-7■■■■□ 25.7
CSTF2P33240 GPHN-206ENST00000553936 574 ntTSL 36.67□□□□□ -1.345e-7■■■■□ 25.7
CSTF2P33240 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.96□□□□□ -1.465e-7■■■■□ 25.7
CSTF2P33240 GPHN-210ENST00000555668 550 ntTSL 44.38□□□□□ -1.715e-7■■■■□ 25.7
CSTF2P33240 GPHN-215ENST00000557654 503 ntTSL 44.2□□□□□ -1.745e-7■■■■□ 25.7
CSTF2P33240 GPHN-214ENST00000556633 512 ntTSL 33.41□□□□□ -1.865e-7■■■■□ 25.7
CSTF2P33240 CDK6-204ENST00000473078 386 ntTSL 21.94□□□□□ -2.14e-7■■■■□ 25.6
CSTF2P33240 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.371e-7■■■■□ 25.5
CSTF2P33240 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.151e-7■■■■□ 25.5
CSTF2P33240 RNF13-207ENST00000467977 761 ntTSL 515.03■□□□□ -02e-6■■■■□ 25.5
CSTF2P33240 RNF13-215ENST00000491086 1104 ntTSL 212.18□□□□□ -0.462e-6■■■■□ 25.5
CSTF2P33240 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.512e-6■■■■□ 25.5
CSTF2P33240 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.532e-6■■■■□ 25.5
CSTF2P33240 RNF13-208ENST00000467996 767 ntTSL 511.28□□□□□ -0.62e-6■■■■□ 25.5
CSTF2P33240 RNF13-212ENST00000474348 1027 ntTSL 59.11□□□□□ -0.952e-6■■■■□ 25.5
CSTF2P33240 RNF13-210ENST00000468648 570 ntTSL 55.45□□□□□ -1.542e-6■■■■□ 25.5
CSTF2P33240 RNF13-204ENST00000459632 1008 ntTSL 45.35□□□□□ -1.552e-6■■■■□ 25.5
CSTF2P33240 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.13□□□□□ -1.752e-6■■■■□ 25.5
CSTF2P33240 RNF13-206ENST00000466795 586 ntTSL 43.28□□□□□ -1.882e-6■■■■□ 25.5
CSTF2P33240 RNF13-214ENST00000490631 583 ntTSL 33.15□□□□□ -1.912e-6■■■■□ 25.5
CSTF2P33240 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.622e-7■■■■□ 25.5
CSTF2P33240 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.982e-7■■■■□ 25.5
CSTF2P33240 TFDP1-203ENST00000453989 792 ntTSL 323.44■■□□□ 1.349e-9■■■■□ 25.4
CSTF2P33240 TFDP1-202ENST00000408980 866 ntTSL 522.65■■□□□ 1.229e-9■■■■□ 25.4
CSTF2P33240 TFDP1-208ENST00000544902 1571 ntTSL 221.46■■□□□ 1.039e-9■■■■□ 25.4
CSTF2P33240 TFDP1-206ENST00000475254 804 ntTSL 318.32■□□□□ 0.529e-9■■■■□ 25.4
CSTF2P33240 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.229e-9■■■■□ 25.4
CSTF2P33240 TFDP1-205ENST00000465174 955 ntTSL 313.38□□□□□ -0.279e-9■■■■□ 25.4
CSTF2P33240 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.82□□□□□ -11e-6■■■■□ 25.4
CSTF2P33240 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.873e-8■■■■□ 25.4
CSTF2P33240 INSIG2-203ENST00000467223 627 ntTSL 519.1■□□□□ 0.651e-6■■■■□ 25.3
CSTF2P33240 INSIG2-202ENST00000411929 574 ntTSL 215.6■□□□□ 0.091e-6■■■■□ 25.3
CSTF2P33240 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.022e-16■■■■□ 25.3
CSTF2P33240 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.971e-8■■■■□ 25.3
CSTF2P33240 CHD2-226ENST00000636881 3545 ntTSL 58.2□□□□□ -1.11e-8■■■■□ 25.3
CSTF2P33240 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.91□□□□□ -1.31e-8■■■■□ 25.3
CSTF2P33240 CHD2-221ENST00000635856 4236 ntTSL 56.3□□□□□ -1.41e-8■■■■□ 25.3
CSTF2P33240 CHD2-227ENST00000637572 4452 ntTSL 55.35□□□□□ -1.551e-8■■■■□ 25.3
CSTF2P33240 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.86■□□□□ 0.292e-6■■■■□ 25.3
CSTF2P33240 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.222e-6■■■■□ 25.3
CSTF2P33240 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.432e-6■■■■□ 25.3
CSTF2P33240 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC11.53□□□□□ -0.562e-6■■■■□ 25.3
CSTF2P33240 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.572e-6■■■■□ 25.3
CSTF2P33240 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.652e-6■■■■□ 25.3
CSTF2P33240 DAPK1-212ENST00000489291 4334 ntTSL 1 (best)9.21□□□□□ -0.942e-6■■■■□ 25.3
CSTF2P33240 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.043e-9■■■■□ 25.2
CSTF2P33240 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12□□□□□ -0.493e-9■■■■□ 25.2
CSTF2P33240 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.883e-9■■■■□ 25.2
CSTF2P33240 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.783e-9■■■■□ 25.2
CSTF2P33240 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.573e-9■■■■□ 25.2
CSTF2P33240 ZNF331-220ENST00000513999 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.783e-9■■■■□ 25.2
CSTF2P33240 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.163e-9■■■■□ 25.2
CSTF2P33240 PHF20L1-211ENST00000460236 3393 ntTSL 55.37□□□□□ -1.553e-7■■■■□ 25.2
CSTF2P33240 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.186e-7■■■■□ 25.2
CSTF2P33240 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.526e-7■■■■□ 25.2
CSTF2P33240 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.15□□□□□ -1.597e-8■■■■□ 25.2
CSTF2P33240 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.667e-8■■■■□ 25.2
CSTF2P33240 BCLAF1-217ENST00000533422 692 ntTSL 34.51□□□□□ -1.697e-8■■■■□ 25.2
CSTF2P33240 BCLAF1-224ENST00000640069 7719 ntTSL 51.3□□□□□ -2.27e-8■■■■□ 25.2
CSTF2P33240 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.654e-7■■■■□ 25.1
CSTF2P33240 QDPR-205ENST00000507439 1374 ntTSL 224.64■■□□□ 1.534e-7■■■■□ 25.1
CSTF2P33240 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.96■■□□□ 1.434e-7■■■■□ 25.1
CSTF2P33240 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.54■■□□□ 1.364e-7■■■■□ 25.1
CSTF2P33240 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.14e-9■■■■□ 25.1
CSTF2P33240 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.164e-9■■■■□ 25.1
CSTF2P33240 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.354e-9■■■■□ 25.1
CSTF2P33240 COG5-208ENST00000475638 592 ntTSL 34.24□□□□□ -1.734e-9■■■■□ 25.1
CSTF2P33240 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.14e-7■■■■□ 25.1
CSTF2P33240 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.85□□□□□ -1.634e-7■■■■□ 25.1
CSTF2P33240 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.7□□□□□ -1.664e-7■■■■□ 25.1
CSTF2P33240 SORL1-210ENST00000532451 2165 ntTSL 1 (best)22.16■■□□□ 1.145e-9■■■■□ 25.1
CSTF2P33240 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.475e-9■■■■□ 25.1
CSTF2P33240 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.155e-9■■■■□ 25.1
CSTF2P33240 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.155e-9■■■■□ 25.1
CSTF2P33240 AZIN1-207ENST00000520402 660 ntTSL 413.14□□□□□ -0.315e-9■■■■□ 25.1
CSTF2P33240 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.585e-9■■■■□ 25.1
CSTF2P33240 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.845e-9■■■■□ 25.1
CSTF2P33240 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC9.76□□□□□ -0.855e-9■■■■□ 25.1
CSTF2P33240 AZIN1-203ENST00000517581 576 ntTSL 49.27□□□□□ -0.935e-9■■■■□ 25.1
CSTF2P33240 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.995e-9■■■■□ 25.1
CSTF2P33240 AZIN1-206ENST00000518940 574 ntTSL 38.85□□□□□ -0.995e-9■■■■□ 25.1
CSTF2P33240 AZIN1-204ENST00000518353 773 ntTSL 57.04□□□□□ -1.285e-9■■■■□ 25.1
CSTF2P33240 SCAF11-213ENST00000550629 579 ntTSL 25.45□□□□□ -1.545e-9■■■■□ 25.1
CSTF2P33240 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.65□□□□□ -1.665e-9■■■■□ 25.1
CSTF2P33240 SCAF11-214ENST00000550893 507 ntTSL 24.61□□□□□ -1.675e-9■■■■□ 25.1
CSTF2P33240 SCAF11-210ENST00000547654 416 ntTSL 23.86□□□□□ -1.795e-9■■■■□ 25.1
CSTF2P33240 EIF2AK1-203ENST00000431744 806 ntTSL 325.64■■□□□ 1.71e-8■■■■□ 25
CSTF2P33240 EIF2AK1-204ENST00000446699 573 ntTSL 425.64■■□□□ 1.71e-8■■■■□ 25
CSTF2P33240 EIF2AK1-205ENST00000461493 631 ntTSL 219.55■□□□□ 0.721e-8■■■■□ 25
CSTF2P33240 EIF2AK1-206ENST00000463213 791 ntTSL 216.11■□□□□ 0.171e-8■■■■□ 25
CSTF2P33240 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.41e-8■■■■□ 25
CSTF2P33240 USP34-211ENST00000472706 556 ntTSL 45.12□□□□□ -1.598e-8■■■■□ 25
CSTF2P33240 USP34-215ENST00000484179 927 ntTSL 34.56□□□□□ -1.688e-8■■■■□ 25
CSTF2P33240 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.78e-8■■■■□ 25
CSTF2P33240 USP34-205ENST00000453734 2708 ntTSL 1 (best)2.59□□□□□ -28e-8■■■■□ 25
CSTF2P33240 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.271e-23■■■■□ 25
CSTF2P33240 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.221e-23■■■■□ 25
CSTF2P33240 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.221e-23■■■■□ 25
CSTF2P33240 MCF2L-218ENST00000442625 2710 ntTSL 1 (best)13.42□□□□□ -0.268e-7■■■■□ 25
Retrieved 100 of 6,735 protein–RNA pairs in 32.8 ms