RNA–Protein interactions for RNA: ENST00000459628.5

GPHN-202, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 1,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-202ENST00000459628 NISCHQ9Y2I1 1504 aa30.19■■■□□ 2.42
GPHN-202ENST00000459628 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
GPHN-202ENST00000459628 ABCC9O60706 1549 aa25.84■■□□□ 1.73
GPHN-202ENST00000459628 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
GPHN-202ENST00000459628 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
GPHN-202ENST00000459628 NACADO15069 1562 aa24.99■■□□□ 1.59
GPHN-202ENST00000459628 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
GPHN-202ENST00000459628 DCAF1Q9Y4B6 1507 aa24.93■■□□□ 1.58
GPHN-202ENST00000459628 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
GPHN-202ENST00000459628 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
GPHN-202ENST00000459628 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
GPHN-202ENST00000459628 SCRIBQ14160 1630 aa24.48■■□□□ 1.51
GPHN-202ENST00000459628 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
GPHN-202ENST00000459628 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
GPHN-202ENST00000459628 PABPN1Q86U42 306 aaKnown RBP eCLIP24.18■■□□□ 1.46
GPHN-202ENST00000459628 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
GPHN-202ENST00000459628 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
GPHN-202ENST00000459628 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
GPHN-202ENST00000459628 SMARCA4P51532 1647 aa23.39■■□□□ 1.34
GPHN-202ENST00000459628 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
GPHN-202ENST00000459628 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
GPHN-202ENST00000459628 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
GPHN-202ENST00000459628 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
GPHN-202ENST00000459628 WIZO95785 1651 aa23.14■■□□□ 1.29
GPHN-202ENST00000459628 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
GPHN-202ENST00000459628 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
GPHN-202ENST00000459628 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
GPHN-202ENST00000459628 PEG3Q9GZU2 1588 aa23.09■■□□□ 1.29
GPHN-202ENST00000459628 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
GPHN-202ENST00000459628 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
GPHN-202ENST00000459628 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
GPHN-202ENST00000459628 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
GPHN-202ENST00000459628 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
GPHN-202ENST00000459628 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
GPHN-202ENST00000459628 NESP48681 1621 aa22.47■■□□□ 1.19
GPHN-202ENST00000459628 LAMC3Q9Y6N6 1575 aa22.41■■□□□ 1.18
GPHN-202ENST00000459628 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
GPHN-202ENST00000459628 CFTRP13569 1480 aa22.33■■□□□ 1.17
GPHN-202ENST00000459628 PRDM2Q13029 1718 aa22.33■■□□□ 1.16
GPHN-202ENST00000459628 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
GPHN-202ENST00000459628 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
GPHN-202ENST00000459628 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
GPHN-202ENST00000459628 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
GPHN-202ENST00000459628 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
GPHN-202ENST00000459628 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
GPHN-202ENST00000459628 MRC2Q9UBG0 1479 aa22■■□□□ 1.11
GPHN-202ENST00000459628 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
GPHN-202ENST00000459628 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
GPHN-202ENST00000459628 WDR62O43379 1518 aa21.91■■□□□ 1.1
GPHN-202ENST00000459628 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
GPHN-202ENST00000459628 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
GPHN-202ENST00000459628 CUX1P39880 1505 aa21.85■■□□□ 1.09
GPHN-202ENST00000459628 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
GPHN-202ENST00000459628 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
GPHN-202ENST00000459628 CUX2O14529 1486 aa21.79■■□□□ 1.08
GPHN-202ENST00000459628 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
GPHN-202ENST00000459628 TOP2BQ02880 1626 aa21.75■■□□□ 1.07
GPHN-202ENST00000459628 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
GPHN-202ENST00000459628 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
GPHN-202ENST00000459628 RAD54L2Q9Y4B4 1467 aa21.63■■□□□ 1.05
GPHN-202ENST00000459628 TARBP1Q13395 1621 aaKnown RBP21.61■■□□□ 1.05
GPHN-202ENST00000459628 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
GPHN-202ENST00000459628 SOGA1O94964 1423 aa21.6■■□□□ 1.05
GPHN-202ENST00000459628 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
GPHN-202ENST00000459628 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
GPHN-202ENST00000459628 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
GPHN-202ENST00000459628 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
GPHN-202ENST00000459628 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
GPHN-202ENST00000459628 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
GPHN-202ENST00000459628 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.02
GPHN-202ENST00000459628 ABCA5Q8WWZ7 1642 aa21.42■■□□□ 1.02
GPHN-202ENST00000459628 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
GPHN-202ENST00000459628 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
GPHN-202ENST00000459628 KIF27Q86VH2 1401 aa21.31■■□□□ 1
GPHN-202ENST00000459628 GRIN2BQ13224 1484 aa21.3■■□□□ 1
GPHN-202ENST00000459628 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
GPHN-202ENST00000459628 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
GPHN-202ENST00000459628 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
GPHN-202ENST00000459628 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
GPHN-202ENST00000459628 CHD1O14646 1710 aa21.2■□□□□ 0.98
GPHN-202ENST00000459628 ADAMTS12P58397 1594 aa21.2■□□□□ 0.98
GPHN-202ENST00000459628 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
GPHN-202ENST00000459628 CUL7Q14999 1698 aa21.17■□□□□ 0.98
GPHN-202ENST00000459628 IGF1RP08069 1367 aa21.16■□□□□ 0.98
GPHN-202ENST00000459628 FBLN2P98095 1184 aa21.15■□□□□ 0.98
GPHN-202ENST00000459628 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
GPHN-202ENST00000459628 EEA1Q15075 1411 aa21.12■□□□□ 0.97
GPHN-202ENST00000459628 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
GPHN-202ENST00000459628 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
GPHN-202ENST00000459628 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
GPHN-202ENST00000459628 CARMIL1Q5VZK9 1371 aa21.06■□□□□ 0.96
GPHN-202ENST00000459628 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
GPHN-202ENST00000459628 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
GPHN-202ENST00000459628 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
GPHN-202ENST00000459628 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
GPHN-202ENST00000459628 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
GPHN-202ENST00000459628 KIF21BO75037 1637 aa20.95■□□□□ 0.94
GPHN-202ENST00000459628 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
GPHN-202ENST00000459628 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
GPHN-202ENST00000459628 NUP160Q12769 1436 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms