RNA–Protein interactions for RNA: ENST00000466795.5

RNF13-206, Transcript of ring finger protein 13, humanhuman

TSL 4

Gene RNF13, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-206ENST00000466795 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
RNF13-206ENST00000466795 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
RNF13-206ENST00000466795 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
RNF13-206ENST00000466795 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
RNF13-206ENST00000466795 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
RNF13-206ENST00000466795 FOXD1Q16676 465 aa15.62■□□□□ 0.09
RNF13-206ENST00000466795 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
RNF13-206ENST00000466795 ADRA2BP18089 450 aa15.11■□□□□ 0.01
RNF13-206ENST00000466795 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
RNF13-206ENST00000466795 MSH5O43196 834 aa14.29□□□□□ -0.12
RNF13-206ENST00000466795 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
RNF13-206ENST00000466795 KCNA4P22459 653 aa13.81□□□□□ -0.2
RNF13-206ENST00000466795 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
RNF13-206ENST00000466795 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
RNF13-206ENST00000466795 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
RNF13-206ENST00000466795 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
RNF13-206ENST00000466795 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
RNF13-206ENST00000466795 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
RNF13-206ENST00000466795 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
RNF13-206ENST00000466795 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
RNF13-206ENST00000466795 HOXD11P31277 338 aaPredicted RBP13.19□□□□□ -0.3
RNF13-206ENST00000466795 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
RNF13-206ENST00000466795 DNAJC5BQ9UF47 199 aa13□□□□□ -0.33
RNF13-206ENST00000466795 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
RNF13-206ENST00000466795 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
RNF13-206ENST00000466795 ZBTB22O15209 634 aa12.75□□□□□ -0.37
RNF13-206ENST00000466795 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
RNF13-206ENST00000466795 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
RNF13-206ENST00000466795 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
RNF13-206ENST00000466795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.4
RNF13-206ENST00000466795 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
RNF13-206ENST00000466795 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
RNF13-206ENST00000466795 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
RNF13-206ENST00000466795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
RNF13-206ENST00000466795 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
RNF13-206ENST00000466795 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
RNF13-206ENST00000466795 ATXN8OSP0DMR3 200 aa12.14□□□□□ -0.47
RNF13-206ENST00000466795 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
RNF13-206ENST00000466795 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
RNF13-206ENST00000466795 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
RNF13-206ENST00000466795 APLP2Q06481 763 aa12.02□□□□□ -0.49
RNF13-206ENST00000466795 CAPN15O75808 1086 aa11.95□□□□□ -0.5
RNF13-206ENST00000466795 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
RNF13-206ENST00000466795 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
RNF13-206ENST00000466795 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
RNF13-206ENST00000466795 ABCB7O75027 752 aa11.78□□□□□ -0.52
RNF13-206ENST00000466795 POLA2Q14181 598 aa11.75□□□□□ -0.53
RNF13-206ENST00000466795 DSG3P32926 999 aa11.74□□□□□ -0.53
RNF13-206ENST00000466795 MKRN4PQ13434 485 aaPredicted RBP11.61□□□□□ -0.55
RNF13-206ENST00000466795 FBLN2P98095 1184 aa11.52□□□□□ -0.57
RNF13-206ENST00000466795 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
RNF13-206ENST00000466795 FKBP8Q14318 412 aa11.47□□□□□ -0.57
RNF13-206ENST00000466795 OSCARQ8IYS5 282 aa11.39□□□□□ -0.59
RNF13-206ENST00000466795 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
RNF13-206ENST00000466795 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
RNF13-206ENST00000466795 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
RNF13-206ENST00000466795 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
RNF13-206ENST00000466795 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.61
RNF13-206ENST00000466795 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
RNF13-206ENST00000466795 PROM2Q8N271 834 aa11.19□□□□□ -0.62
RNF13-206ENST00000466795 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
RNF13-206ENST00000466795 PABPN1Q86U42 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
RNF13-206ENST00000466795 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
RNF13-206ENST00000466795 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
RNF13-206ENST00000466795 REM2Q8IYK8 340 aaPredicted RBP10.95□□□□□ -0.66
RNF13-206ENST00000466795 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
RNF13-206ENST00000466795 SPDYE1Q8NFV5 336 aaPredicted RBP10.88□□□□□ -0.67
RNF13-206ENST00000466795 STAG3Q9UJ98 1225 aa10.86□□□□□ -0.67
RNF13-206ENST00000466795 PITPNM1O00562 1244 aa10.85□□□□□ -0.67
RNF13-206ENST00000466795 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
RNF13-206ENST00000466795 IFNLR1Q8IU57 520 aaPredicted RBP10.75□□□□□ -0.69
RNF13-206ENST00000466795 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
RNF13-206ENST00000466795 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
RNF13-206ENST00000466795 MIER1Q8N108 512 aa10.72□□□□□ -0.69
RNF13-206ENST00000466795 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
RNF13-206ENST00000466795 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
RNF13-206ENST00000466795 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
RNF13-206ENST00000466795 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
RNF13-206ENST00000466795 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
RNF13-206ENST00000466795 PLEKHG5O94827 1062 aa10.6□□□□□ -0.71
RNF13-206ENST00000466795 FXR2P51116 673 aaKnown RBP eCLIP10.6□□□□□ -0.71
RNF13-206ENST00000466795 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
RNF13-206ENST00000466795 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
RNF13-206ENST00000466795 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
RNF13-206ENST00000466795 SPOCK2Q92563 424 aa10.57□□□□□ -0.72
RNF13-206ENST00000466795 PRKAR2AP13861 404 aaKnown RBP10.56□□□□□ -0.72
RNF13-206ENST00000466795 ZBTB47Q9UFB7 747 aaPredicted RBP10.55□□□□□ -0.72
RNF13-206ENST00000466795 NUBP1P53384 320 aa10.48□□□□□ -0.73
RNF13-206ENST00000466795 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
RNF13-206ENST00000466795 PKD2Q13563 968 aa10.44□□□□□ -0.74
RNF13-206ENST00000466795 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
RNF13-206ENST00000466795 RASEFQ8IZ41 740 aa10.43□□□□□ -0.74
RNF13-206ENST00000466795 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
RNF13-206ENST00000466795 DCAF8Q5TAQ9 597 aa10.35□□□□□ -0.75
RNF13-206ENST00000466795 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
RNF13-206ENST00000466795 GSE1Q14687 1217 aa10.33□□□□□ -0.76
RNF13-206ENST00000466795 ECM2O94769 699 aaPredicted RBP10.32□□□□□ -0.76
RNF13-206ENST00000466795 TSPYL2Q9H2G4 693 aaPredicted RBP10.32□□□□□ -0.76
RNF13-206ENST00000466795 RGL2O15211 777 aa10.26□□□□□ -0.77
RNF13-206ENST00000466795 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms