RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
SORL1-201ENST00000260197 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
SORL1-201ENST00000260197 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
SORL1-201ENST00000260197 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
SORL1-201ENST00000260197 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
SORL1-201ENST00000260197 APLP2Q06481 763 aa18.13■□□□□ 0.49
SORL1-201ENST00000260197 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
SORL1-201ENST00000260197 CENPBP07199 599 aaPredicted RBP17.87■□□□□ 0.45
SORL1-201ENST00000260197 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
SORL1-201ENST00000260197 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
SORL1-201ENST00000260197 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
SORL1-201ENST00000260197 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
SORL1-201ENST00000260197 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
SORL1-201ENST00000260197 MYT1Q01538 1121 aa17.75■□□□□ 0.43
SORL1-201ENST00000260197 TTBK1Q5TCY1 1321 aaPredicted RBP17.59■□□□□ 0.41
SORL1-201ENST00000260197 NEFLP07196 543 aa17.51■□□□□ 0.39
SORL1-201ENST00000260197 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
SORL1-201ENST00000260197 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.35
SORL1-201ENST00000260197 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
SORL1-201ENST00000260197 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
SORL1-201ENST00000260197 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
SORL1-201ENST00000260197 DAXXQ9UER7 740 aaPredicted RBP17.08■□□□□ 0.33
SORL1-201ENST00000260197 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
SORL1-201ENST00000260197 HRCP23327 699 aa16.91■□□□□ 0.3
SORL1-201ENST00000260197 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
SORL1-201ENST00000260197 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
SORL1-201ENST00000260197 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
SORL1-201ENST00000260197 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
SORL1-201ENST00000260197 ITGAEP38570 1179 aa16.62■□□□□ 0.25
SORL1-201ENST00000260197 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.25
SORL1-201ENST00000260197 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
SORL1-201ENST00000260197 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
SORL1-201ENST00000260197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
SORL1-201ENST00000260197 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
SORL1-201ENST00000260197 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
SORL1-201ENST00000260197 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
SORL1-201ENST00000260197 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
SORL1-201ENST00000260197 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
SORL1-201ENST00000260197 CNGB1Q14028 1251 aaPredicted RBP16.34■□□□□ 0.21
SORL1-201ENST00000260197 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
SORL1-201ENST00000260197 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
SORL1-201ENST00000260197 ANP32CO43423 234 aa16.26■□□□□ 0.19
SORL1-201ENST00000260197 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
SORL1-201ENST00000260197 GTF3C3Q9Y5Q9 886 aa16.22■□□□□ 0.19
SORL1-201ENST00000260197 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
SORL1-201ENST00000260197 BCANQ96GW7 911 aa16.15■□□□□ 0.18
SORL1-201ENST00000260197 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
SORL1-201ENST00000260197 NEUROD1Q13562 356 aa16.14■□□□□ 0.17
SORL1-201ENST00000260197 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.17
SORL1-201ENST00000260197 CANXP27824 592 aaKnown RBP16.13■□□□□ 0.17
SORL1-201ENST00000260197 DCAF1Q9Y4B6 1507 aa16.12■□□□□ 0.17
SORL1-201ENST00000260197 ABCC9O60706 1549 aa16.08■□□□□ 0.17
SORL1-201ENST00000260197 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
SORL1-201ENST00000260197 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
SORL1-201ENST00000260197 NEFMP07197 916 aa15.96■□□□□ 0.15
SORL1-201ENST00000260197 ANP32BQ92688 251 aaKnown RBP15.96■□□□□ 0.15
SORL1-201ENST00000260197 ZCCHC6Q5VYS8 1495 aaKnown RBP15.87■□□□□ 0.13
SORL1-201ENST00000260197 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
SORL1-201ENST00000260197 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
SORL1-201ENST00000260197 GLIPR1L2Q4G1C9 344 aa15.85■□□□□ 0.13
SORL1-201ENST00000260197 UPF2Q9HAU5 1272 aaKnown RBP15.85■□□□□ 0.13
SORL1-201ENST00000260197 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
SORL1-201ENST00000260197 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
SORL1-201ENST00000260197 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
SORL1-201ENST00000260197 KAT6BQ8WYB5 2073 aa15.77■□□□□ 0.11
SORL1-201ENST00000260197 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.115e-7■■■□□ 16.4
SORL1-201ENST00000260197 EIF5BO60841 1220 aaKnown RBP15.73■□□□□ 0.11
SORL1-201ENST00000260197 RB1CC1Q8TDY2 1594 aa15.71■□□□□ 0.11
SORL1-201ENST00000260197 FKBP8Q14318 412 aa15.7■□□□□ 0.1
SORL1-201ENST00000260197 FBLN2P98095 1184 aa15.69■□□□□ 0.1
SORL1-201ENST00000260197 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
SORL1-201ENST00000260197 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
SORL1-201ENST00000260197 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.63■□□□□ 0.09
SORL1-201ENST00000260197 CCDC136Q96JN2 1154 aa15.61■□□□□ 0.09
SORL1-201ENST00000260197 NBR1Q14596 966 aa15.59■□□□□ 0.09
SORL1-201ENST00000260197 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
SORL1-201ENST00000260197 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
SORL1-201ENST00000260197 CLIP1P30622 1438 aa15.56■□□□□ 0.08
SORL1-201ENST00000260197 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
SORL1-201ENST00000260197 FAM9BQ8IZU0 186 aa15.53■□□□□ 0.08
SORL1-201ENST00000260197 MYH16Q9H6N6 1097 aa15.53■□□□□ 0.08
SORL1-201ENST00000260197 NACADO15069 1562 aa15.53■□□□□ 0.08
SORL1-201ENST00000260197 TMC1Q8TDI8 760 aa15.52■□□□□ 0.08
SORL1-201ENST00000260197 GOLGA3Q08378 1498 aa15.51■□□□□ 0.07
SORL1-201ENST00000260197 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
SORL1-201ENST00000260197 DDX10Q13206 875 aaKnown RBP15.5■□□□□ 0.07
SORL1-201ENST00000260197 EEA1Q15075 1411 aa15.49■□□□□ 0.07
SORL1-201ENST00000260197 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
SORL1-201ENST00000260197 BECN1Q14457 450 aa15.48■□□□□ 0.07
SORL1-201ENST00000260197 DDRGK1Q96HY6 314 aa15.47■□□□□ 0.07
SORL1-201ENST00000260197 MTUS2Q5JR59 1369 aa15.47■□□□□ 0.07
SORL1-201ENST00000260197 MRS2Q9HD23 443 aa15.45■□□□□ 0.06
SORL1-201ENST00000260197 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
SORL1-201ENST00000260197 MYO15BQ96JP2 1530 aa15.44■□□□□ 0.06
SORL1-201ENST00000260197 ANP32EQ9BTT0 268 aa15.44■□□□□ 0.06
SORL1-201ENST00000260197 ARXQ96QS3 562 aa15.43■□□□□ 0.06
SORL1-201ENST00000260197 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
SORL1-201ENST00000260197 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
SORL1-201ENST00000260197 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
SORL1-201ENST00000260197 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms