RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
GPHN-206ENST00000553936 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
GPHN-206ENST00000553936 ABCC9O60706 1549 aa15.48■□□□□ 0.07
GPHN-206ENST00000553936 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
GPHN-206ENST00000553936 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
GPHN-206ENST00000553936 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
GPHN-206ENST00000553936 RB1CC1Q8TDY2 1594 aa14.65□□□□□ -0.06
GPHN-206ENST00000553936 NACADO15069 1562 aa14.47□□□□□ -0.09
GPHN-206ENST00000553936 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
GPHN-206ENST00000553936 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
GPHN-206ENST00000553936 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
GPHN-206ENST00000553936 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
GPHN-206ENST00000553936 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
GPHN-206ENST00000553936 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
GPHN-206ENST00000553936 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
GPHN-206ENST00000553936 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
GPHN-206ENST00000553936 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
GPHN-206ENST00000553936 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
GPHN-206ENST00000553936 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
GPHN-206ENST00000553936 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
GPHN-206ENST00000553936 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
GPHN-206ENST00000553936 CUX2O14529 1486 aa13.55□□□□□ -0.24
GPHN-206ENST00000553936 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
GPHN-206ENST00000553936 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
GPHN-206ENST00000553936 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
GPHN-206ENST00000553936 ATAD2BQ9ULI0 1458 aa13.24□□□□□ -0.29
GPHN-206ENST00000553936 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
GPHN-206ENST00000553936 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
GPHN-206ENST00000553936 NESP48681 1621 aa13.17□□□□□ -0.3
GPHN-206ENST00000553936 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
GPHN-206ENST00000553936 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
GPHN-206ENST00000553936 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
GPHN-206ENST00000553936 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
GPHN-206ENST00000553936 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
GPHN-206ENST00000553936 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
GPHN-206ENST00000553936 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
GPHN-206ENST00000553936 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
GPHN-206ENST00000553936 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
GPHN-206ENST00000553936 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
GPHN-206ENST00000553936 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
GPHN-206ENST00000553936 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
GPHN-206ENST00000553936 WDR62O43379 1518 aa12.91□□□□□ -0.34
GPHN-206ENST00000553936 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
GPHN-206ENST00000553936 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
GPHN-206ENST00000553936 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
GPHN-206ENST00000553936 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
GPHN-206ENST00000553936 CFTRP13569 1480 aa12.71□□□□□ -0.38
GPHN-206ENST00000553936 WIZO95785 1651 aa12.7□□□□□ -0.38
GPHN-206ENST00000553936 RIMBP3CA6NJZ7 1639 aa12.67□□□□□ -0.38
GPHN-206ENST00000553936 RIMBP3BA6NNM3 1639 aa12.67□□□□□ -0.38
GPHN-206ENST00000553936 RIMBP3Q9UFD9 1639 aa12.67□□□□□ -0.38
GPHN-206ENST00000553936 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
GPHN-206ENST00000553936 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
GPHN-206ENST00000553936 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
GPHN-206ENST00000553936 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
GPHN-206ENST00000553936 CYB5RLQ6IPT4 315 aa12.58□□□□□ -0.4
GPHN-206ENST00000553936 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
GPHN-206ENST00000553936 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
GPHN-206ENST00000553936 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
GPHN-206ENST00000553936 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.41
GPHN-206ENST00000553936 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
GPHN-206ENST00000553936 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
GPHN-206ENST00000553936 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
GPHN-206ENST00000553936 FBLN2P98095 1184 aa12.46□□□□□ -0.41
GPHN-206ENST00000553936 ARAP1Q96P48 1450 aa12.46□□□□□ -0.42
GPHN-206ENST00000553936 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
GPHN-206ENST00000553936 CHD1O14646 1710 aa12.42□□□□□ -0.42
GPHN-206ENST00000553936 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
GPHN-206ENST00000553936 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.42
GPHN-206ENST00000553936 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
GPHN-206ENST00000553936 FOXD1Q16676 465 aa12.35□□□□□ -0.43
GPHN-206ENST00000553936 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
GPHN-206ENST00000553936 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
GPHN-206ENST00000553936 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
GPHN-206ENST00000553936 WDR97A6NE52 1622 aa12.31□□□□□ -0.44
GPHN-206ENST00000553936 SOGA1O94964 1423 aa12.3□□□□□ -0.44
GPHN-206ENST00000553936 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
GPHN-206ENST00000553936 SNAPC4Q5SXM2 1469 aa12.29□□□□□ -0.44
GPHN-206ENST00000553936 CLASP1Q7Z460 1538 aa12.29□□□□□ -0.44
GPHN-206ENST00000553936 MAGI1Q96QZ7 1491 aaPredicted RBP12.28□□□□□ -0.44
GPHN-206ENST00000553936 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.44
GPHN-206ENST00000553936 SYNJ2O15056 1496 aa12.24□□□□□ -0.45
GPHN-206ENST00000553936 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
GPHN-206ENST00000553936 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
GPHN-206ENST00000553936 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.45
GPHN-206ENST00000553936 CUX1P39880 1505 aa12.12□□□□□ -0.47
GPHN-206ENST00000553936 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
GPHN-206ENST00000553936 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
GPHN-206ENST00000553936 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
GPHN-206ENST00000553936 GRIN2AQ12879 1464 aa12.07□□□□□ -0.48
GPHN-206ENST00000553936 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
GPHN-206ENST00000553936 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
GPHN-206ENST00000553936 NUP160Q12769 1436 aa12.03□□□□□ -0.48
GPHN-206ENST00000553936 ERCC6L2Q5T890 1561 aa12.02□□□□□ -0.49
GPHN-206ENST00000553936 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
GPHN-206ENST00000553936 FHAD1B1AJZ9 1412 aa12□□□□□ -0.49
GPHN-206ENST00000553936 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
GPHN-206ENST00000553936 ADAMTS12P58397 1594 aa12□□□□□ -0.49
GPHN-206ENST00000553936 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
GPHN-206ENST00000553936 FAM69CQ0P6D2 419 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms