RNA–Protein interactions for RNA: ENST00000468648.5

RNF13-210, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-210ENST00000468648 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
RNF13-210ENST00000468648 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
RNF13-210ENST00000468648 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
RNF13-210ENST00000468648 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
RNF13-210ENST00000468648 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
RNF13-210ENST00000468648 FOXD1Q16676 465 aa16.17■□□□□ 0.18
RNF13-210ENST00000468648 ADRA2BP18089 450 aa16.12■□□□□ 0.17
RNF13-210ENST00000468648 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
RNF13-210ENST00000468648 KCNA4P22459 653 aa15.69■□□□□ 0.1
RNF13-210ENST00000468648 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
RNF13-210ENST00000468648 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
RNF13-210ENST00000468648 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
RNF13-210ENST00000468648 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
RNF13-210ENST00000468648 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
RNF13-210ENST00000468648 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
RNF13-210ENST00000468648 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
RNF13-210ENST00000468648 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
RNF13-210ENST00000468648 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
RNF13-210ENST00000468648 MSH5O43196 834 aa14.76□□□□□ -0.05
RNF13-210ENST00000468648 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
RNF13-210ENST00000468648 ZBTB22O15209 634 aa14.43□□□□□ -0.1
RNF13-210ENST00000468648 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
RNF13-210ENST00000468648 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
RNF13-210ENST00000468648 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
RNF13-210ENST00000468648 DMRT2Q9Y5R5 561 aa14.13□□□□□ -0.15
RNF13-210ENST00000468648 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
RNF13-210ENST00000468648 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
RNF13-210ENST00000468648 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
RNF13-210ENST00000468648 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
RNF13-210ENST00000468648 POTEDQ86YR6 584 aa13.71□□□□□ -0.21
RNF13-210ENST00000468648 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
RNF13-210ENST00000468648 FKBP8Q14318 412 aa13.44□□□□□ -0.26
RNF13-210ENST00000468648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
RNF13-210ENST00000468648 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
RNF13-210ENST00000468648 DCAF8L1A6NGE4 600 aa13.42□□□□□ -0.26
RNF13-210ENST00000468648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
RNF13-210ENST00000468648 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
RNF13-210ENST00000468648 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
RNF13-210ENST00000468648 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
RNF13-210ENST00000468648 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
RNF13-210ENST00000468648 NISCHQ9Y2I1 1504 aa13.25□□□□□ -0.29
RNF13-210ENST00000468648 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
RNF13-210ENST00000468648 APLP2Q06481 763 aa13.15□□□□□ -0.3
RNF13-210ENST00000468648 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
RNF13-210ENST00000468648 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
RNF13-210ENST00000468648 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
RNF13-210ENST00000468648 FBLN2P98095 1184 aa12.78□□□□□ -0.36
RNF13-210ENST00000468648 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
RNF13-210ENST00000468648 PROM2Q8N271 834 aa12.75□□□□□ -0.37
RNF13-210ENST00000468648 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
RNF13-210ENST00000468648 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
RNF13-210ENST00000468648 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
RNF13-210ENST00000468648 POLA2Q14181 598 aa12.65□□□□□ -0.38
RNF13-210ENST00000468648 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
RNF13-210ENST00000468648 CAPN15O75808 1086 aa12.61□□□□□ -0.39
RNF13-210ENST00000468648 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
RNF13-210ENST00000468648 C1QBPQ07021 282 aaKnown RBP12.59□□□□□ -0.39
RNF13-210ENST00000468648 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
RNF13-210ENST00000468648 ABCB7O75027 752 aa12.4□□□□□ -0.42
RNF13-210ENST00000468648 PLCB2Q00722 1185 aa12.39□□□□□ -0.43
RNF13-210ENST00000468648 PKD2Q13563 968 aa12.31□□□□□ -0.44
RNF13-210ENST00000468648 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
RNF13-210ENST00000468648 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
RNF13-210ENST00000468648 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
RNF13-210ENST00000468648 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
RNF13-210ENST00000468648 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
RNF13-210ENST00000468648 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
RNF13-210ENST00000468648 DSG3P32926 999 aa12.26□□□□□ -0.45
RNF13-210ENST00000468648 SPOCK2Q92563 424 aa12.25□□□□□ -0.45
RNF13-210ENST00000468648 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
RNF13-210ENST00000468648 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
RNF13-210ENST00000468648 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
RNF13-210ENST00000468648 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
RNF13-210ENST00000468648 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
RNF13-210ENST00000468648 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
RNF13-210ENST00000468648 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
RNF13-210ENST00000468648 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.08□□□□□ -0.48
RNF13-210ENST00000468648 MIER1Q8N108 512 aa12.07□□□□□ -0.48
RNF13-210ENST00000468648 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
RNF13-210ENST00000468648 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
RNF13-210ENST00000468648 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
RNF13-210ENST00000468648 VSIG10Q8N0Z9 540 aa12.06□□□□□ -0.48
RNF13-210ENST00000468648 BCANQ96GW7 911 aa11.99□□□□□ -0.49
RNF13-210ENST00000468648 RGL2O15211 777 aa11.96□□□□□ -0.49
RNF13-210ENST00000468648 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
RNF13-210ENST00000468648 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
RNF13-210ENST00000468648 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
RNF13-210ENST00000468648 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
RNF13-210ENST00000468648 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
RNF13-210ENST00000468648 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
RNF13-210ENST00000468648 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
RNF13-210ENST00000468648 CHGAP10645 457 aaKnown RBP11.81□□□□□ -0.52
RNF13-210ENST00000468648 GSE1Q14687 1217 aa11.81□□□□□ -0.52
RNF13-210ENST00000468648 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
RNF13-210ENST00000468648 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.53
RNF13-210ENST00000468648 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
RNF13-210ENST00000468648 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
RNF13-210ENST00000468648 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
RNF13-210ENST00000468648 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
RNF13-210ENST00000468648 DNAJC5Q9H3Z4 198 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms