RNA–Protein interactions for RNA: ENST00000392894.7

RNF13-203, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-203ENST00000392894 NISCHQ9Y2I1 1504 aa24.8■■□□□ 1.56
RNF13-203ENST00000392894 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
RNF13-203ENST00000392894 SUPT5HO00267 1087 aaKnown RBP21.69■■□□□ 1.06
RNF13-203ENST00000392894 DCAF8L2P0C7V8 631 aa21.41■■□□□ 1.02
RNF13-203ENST00000392894 ZCCHC6Q5VYS8 1495 aaKnown RBP20.94■□□□□ 0.94
RNF13-203ENST00000392894 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
RNF13-203ENST00000392894 MYO15BQ96JP2 1530 aa20.84■□□□□ 0.93
RNF13-203ENST00000392894 PCGF6Q9BYE7 350 aa20.66■□□□□ 0.9
RNF13-203ENST00000392894 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
RNF13-203ENST00000392894 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
RNF13-203ENST00000392894 HRCP23327 699 aa20.47■□□□□ 0.87
RNF13-203ENST00000392894 PPARGC1BQ86YN6 1023 aaKnown RBP20.45■□□□□ 0.86
RNF13-203ENST00000392894 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
RNF13-203ENST00000392894 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
RNF13-203ENST00000392894 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
RNF13-203ENST00000392894 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
RNF13-203ENST00000392894 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
RNF13-203ENST00000392894 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
RNF13-203ENST00000392894 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
RNF13-203ENST00000392894 ABCC9O60706 1549 aa19.77■□□□□ 0.76
RNF13-203ENST00000392894 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
RNF13-203ENST00000392894 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
RNF13-203ENST00000392894 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
RNF13-203ENST00000392894 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
RNF13-203ENST00000392894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
RNF13-203ENST00000392894 WIZO95785 1651 aa19.38■□□□□ 0.69
RNF13-203ENST00000392894 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.69
RNF13-203ENST00000392894 CCER1Q8TC90 406 aaPredicted RBP19.25■□□□□ 0.67
RNF13-203ENST00000392894 NACADO15069 1562 aa19.2■□□□□ 0.66
RNF13-203ENST00000392894 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
RNF13-203ENST00000392894 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
RNF13-203ENST00000392894 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
RNF13-203ENST00000392894 CCDC88BA6NC98 1476 aa19.08■□□□□ 0.65
RNF13-203ENST00000392894 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.64
RNF13-203ENST00000392894 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
RNF13-203ENST00000392894 SOGA1O94964 1423 aa19.03■□□□□ 0.64
RNF13-203ENST00000392894 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
RNF13-203ENST00000392894 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
RNF13-203ENST00000392894 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
RNF13-203ENST00000392894 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
RNF13-203ENST00000392894 DIEXFQ68CQ4 756 aaKnown RBP18.89■□□□□ 0.61
RNF13-203ENST00000392894 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
RNF13-203ENST00000392894 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
RNF13-203ENST00000392894 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
RNF13-203ENST00000392894 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
RNF13-203ENST00000392894 SMARCA4P51532 1647 aa18.83■□□□□ 0.61
RNF13-203ENST00000392894 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
RNF13-203ENST00000392894 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
RNF13-203ENST00000392894 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
RNF13-203ENST00000392894 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
RNF13-203ENST00000392894 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
RNF13-203ENST00000392894 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
RNF13-203ENST00000392894 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
RNF13-203ENST00000392894 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
RNF13-203ENST00000392894 GOLGA3Q08378 1498 aa18.59■□□□□ 0.57
RNF13-203ENST00000392894 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
RNF13-203ENST00000392894 APLP2Q06481 763 aa18.58■□□□□ 0.57
RNF13-203ENST00000392894 MIER1Q8N108 512 aa18.54■□□□□ 0.56
RNF13-203ENST00000392894 CLIP1P30622 1438 aa18.53■□□□□ 0.56
RNF13-203ENST00000392894 SYNJ1O43426 1573 aa18.53■□□□□ 0.56
RNF13-203ENST00000392894 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
RNF13-203ENST00000392894 EEA1Q15075 1411 aa18.5■□□□□ 0.55
RNF13-203ENST00000392894 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
RNF13-203ENST00000392894 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
RNF13-203ENST00000392894 ITGAEP38570 1179 aa18.44■□□□□ 0.54
RNF13-203ENST00000392894 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
RNF13-203ENST00000392894 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
RNF13-203ENST00000392894 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
RNF13-203ENST00000392894 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
RNF13-203ENST00000392894 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
RNF13-203ENST00000392894 KIF21BO75037 1637 aa18.27■□□□□ 0.52
RNF13-203ENST00000392894 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
RNF13-203ENST00000392894 ATP1B4Q9UN42 357 aaPredicted RBP18.18■□□□□ 0.5
RNF13-203ENST00000392894 P3H3Q8IVL6 736 aa18.16■□□□□ 0.5
RNF13-203ENST00000392894 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.49
RNF13-203ENST00000392894 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
RNF13-203ENST00000392894 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
RNF13-203ENST00000392894 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
RNF13-203ENST00000392894 CUX1P39880 1505 aa18.05■□□□□ 0.48
RNF13-203ENST00000392894 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
RNF13-203ENST00000392894 HIRIP3Q9BW71 556 aaPredicted RBP18.04■□□□□ 0.48
RNF13-203ENST00000392894 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
RNF13-203ENST00000392894 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
RNF13-203ENST00000392894 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
RNF13-203ENST00000392894 CCNB3Q8WWL7 1395 aa17.97■□□□□ 0.47
RNF13-203ENST00000392894 ARHGAP35Q9NRY4 1499 aa17.96■□□□□ 0.47
RNF13-203ENST00000392894 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
RNF13-203ENST00000392894 CUX2O14529 1486 aa17.93■□□□□ 0.46
RNF13-203ENST00000392894 BCANQ96GW7 911 aa17.92■□□□□ 0.46
RNF13-203ENST00000392894 ERICH3Q5RHP9 1530 aa17.91■□□□□ 0.46
RNF13-203ENST00000392894 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
RNF13-203ENST00000392894 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
RNF13-203ENST00000392894 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
RNF13-203ENST00000392894 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
RNF13-203ENST00000392894 IGF1RP08069 1367 aa17.87■□□□□ 0.45
RNF13-203ENST00000392894 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
RNF13-203ENST00000392894 CLSPNQ9HAW4 1339 aa17.85■□□□□ 0.45
RNF13-203ENST00000392894 CFTRP13569 1480 aa17.83■□□□□ 0.45
RNF13-203ENST00000392894 CARMIL1Q5VZK9 1371 aa17.83■□□□□ 0.45
RNF13-203ENST00000392894 PHLDB1Q86UU1 1377 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms