RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
GPHN-214ENST00000556633 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
GPHN-214ENST00000556633 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
GPHN-214ENST00000556633 SENP3Q9H4L4 574 aaPredicted RBP14.49□□□□□ -0.09
GPHN-214ENST00000556633 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
GPHN-214ENST00000556633 FOXD1Q16676 465 aa13.41□□□□□ -0.26
GPHN-214ENST00000556633 ADRA2BP18089 450 aa13.16□□□□□ -0.3
GPHN-214ENST00000556633 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
GPHN-214ENST00000556633 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
GPHN-214ENST00000556633 KCNA4P22459 653 aa12.39□□□□□ -0.43
GPHN-214ENST00000556633 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
GPHN-214ENST00000556633 MSH5O43196 834 aa12.25□□□□□ -0.45
GPHN-214ENST00000556633 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
GPHN-214ENST00000556633 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.49
GPHN-214ENST00000556633 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
GPHN-214ENST00000556633 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
GPHN-214ENST00000556633 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
GPHN-214ENST00000556633 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
GPHN-214ENST00000556633 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
GPHN-214ENST00000556633 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
GPHN-214ENST00000556633 DMRT2Q9Y5R5 561 aa11.61□□□□□ -0.55
GPHN-214ENST00000556633 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
GPHN-214ENST00000556633 DNAJC5BQ9UF47 199 aa11.49□□□□□ -0.57
GPHN-214ENST00000556633 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
GPHN-214ENST00000556633 ZBTB22O15209 634 aa11.41□□□□□ -0.58
GPHN-214ENST00000556633 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
GPHN-214ENST00000556633 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
GPHN-214ENST00000556633 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
GPHN-214ENST00000556633 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
GPHN-214ENST00000556633 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
GPHN-214ENST00000556633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.65
GPHN-214ENST00000556633 ATXN8OSP0DMR3 200 aa10.88□□□□□ -0.67
GPHN-214ENST00000556633 U3KPZ7 1027 aaPredicted RBP10.81□□□□□ -0.68
GPHN-214ENST00000556633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
GPHN-214ENST00000556633 HNRNPUL2Q1KMD3 747 aaKnown RBP10.77□□□□□ -0.69
GPHN-214ENST00000556633 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
GPHN-214ENST00000556633 ATF5Q9Y2D1 282 aaPredicted RBP10.7□□□□□ -0.7
GPHN-214ENST00000556633 APLP2Q06481 763 aa10.59□□□□□ -0.71
GPHN-214ENST00000556633 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
GPHN-214ENST00000556633 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
GPHN-214ENST00000556633 FKBP8Q14318 412 aa10.47□□□□□ -0.73
GPHN-214ENST00000556633 SPINK5Q9NQ38 1064 aaPredicted RBP10.43□□□□□ -0.74
GPHN-214ENST00000556633 C1QBPQ07021 282 aaKnown RBP10.42□□□□□ -0.74
GPHN-214ENST00000556633 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
GPHN-214ENST00000556633 CAPN15O75808 1086 aa10.38□□□□□ -0.75
GPHN-214ENST00000556633 POLA2Q14181 598 aa10.29□□□□□ -0.76
GPHN-214ENST00000556633 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
GPHN-214ENST00000556633 FBLN2P98095 1184 aa10.23□□□□□ -0.77
GPHN-214ENST00000556633 ABCB7O75027 752 aa10.22□□□□□ -0.77
GPHN-214ENST00000556633 SPDYE4A6NLX3 237 aa10.17□□□□□ -0.78
GPHN-214ENST00000556633 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
GPHN-214ENST00000556633 DSG3P32926 999 aa10.12□□□□□ -0.79
GPHN-214ENST00000556633 CACNB1Q02641 598 aaPredicted RBP10.06□□□□□ -0.8
GPHN-214ENST00000556633 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
GPHN-214ENST00000556633 RTN4Q9NQC3 1192 aaKnown RBP10.04□□□□□ -0.8
GPHN-214ENST00000556633 PROM2Q8N271 834 aa10.01□□□□□ -0.81
GPHN-214ENST00000556633 FBXO3Q9UK99 471 aa10□□□□□ -0.81
GPHN-214ENST00000556633 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
GPHN-214ENST00000556633 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
GPHN-214ENST00000556633 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
GPHN-214ENST00000556633 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
GPHN-214ENST00000556633 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
GPHN-214ENST00000556633 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
GPHN-214ENST00000556633 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
GPHN-214ENST00000556633 PABPN1Q86U42 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
GPHN-214ENST00000556633 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
GPHN-214ENST00000556633 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
GPHN-214ENST00000556633 KLHL34Q8N239 644 aa9.64□□□□□ -0.87
GPHN-214ENST00000556633 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
GPHN-214ENST00000556633 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
GPHN-214ENST00000556633 MIER1Q8N108 512 aa9.61□□□□□ -0.87
GPHN-214ENST00000556633 SPOCK2Q92563 424 aa9.58□□□□□ -0.88
GPHN-214ENST00000556633 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
GPHN-214ENST00000556633 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
GPHN-214ENST00000556633 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
GPHN-214ENST00000556633 PKD2Q13563 968 aa9.53□□□□□ -0.88
GPHN-214ENST00000556633 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
GPHN-214ENST00000556633 REM2Q8IYK8 340 aaPredicted RBP9.5□□□□□ -0.89
GPHN-214ENST00000556633 ZBTB47Q9UFB7 747 aaPredicted RBP9.5□□□□□ -0.89
GPHN-214ENST00000556633 CLEC11AQ9Y240 323 aa9.49□□□□□ -0.89
GPHN-214ENST00000556633 DCAF8L2P0C7V8 631 aa9.47□□□□□ -0.89
GPHN-214ENST00000556633 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
GPHN-214ENST00000556633 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
GPHN-214ENST00000556633 CIZ1Q9ULV3 898 aaPredicted RBP9.4□□□□□ -0.9
GPHN-214ENST00000556633 PITPNM1O00562 1244 aa9.39□□□□□ -0.91
GPHN-214ENST00000556633 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
GPHN-214ENST00000556633 RGL2O15211 777 aa9.32□□□□□ -0.92
GPHN-214ENST00000556633 NUBP1P53384 320 aa9.32□□□□□ -0.92
GPHN-214ENST00000556633 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
GPHN-214ENST00000556633 GSE1Q14687 1217 aa9.3□□□□□ -0.92
GPHN-214ENST00000556633 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
GPHN-214ENST00000556633 TRIM41Q8WV44 630 aa9.29□□□□□ -0.92
GPHN-214ENST00000556633 DCAF8Q5TAQ9 597 aa9.28□□□□□ -0.92
GPHN-214ENST00000556633 FAM212AQ96EL1 285 aa9.26□□□□□ -0.93
GPHN-214ENST00000556633 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
GPHN-214ENST00000556633 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
GPHN-214ENST00000556633 RASEFQ8IZ41 740 aa9.23□□□□□ -0.93
GPHN-214ENST00000556633 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.94
GPHN-214ENST00000556633 RNF25Q96BH1 459 aaPredicted RBP9.19□□□□□ -0.94
GPHN-214ENST00000556633 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms