RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
RNF13-208ENST00000467996 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
RNF13-208ENST00000467996 ABCC9O60706 1549 aa23.61■■□□□ 1.37
RNF13-208ENST00000467996 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
RNF13-208ENST00000467996 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
RNF13-208ENST00000467996 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
RNF13-208ENST00000467996 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
RNF13-208ENST00000467996 NACADO15069 1562 aa23.05■■□□□ 1.28
RNF13-208ENST00000467996 DCAF8L2P0C7V8 631 aa23.04■■□□□ 1.28
RNF13-208ENST00000467996 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
RNF13-208ENST00000467996 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
RNF13-208ENST00000467996 SCRIBQ14160 1630 aa22.59■■□□□ 1.21
RNF13-208ENST00000467996 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
RNF13-208ENST00000467996 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
RNF13-208ENST00000467996 BICRAQ9NZM4 1560 aa22.28■■□□□ 1.16
RNF13-208ENST00000467996 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
RNF13-208ENST00000467996 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
RNF13-208ENST00000467996 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
RNF13-208ENST00000467996 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
RNF13-208ENST00000467996 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
RNF13-208ENST00000467996 MROH2BQ7Z745 1585 aa21.58■■□□□ 1.05
RNF13-208ENST00000467996 RSF1Q96T23 1441 aaPredicted RBP21.48■■□□□ 1.03
RNF13-208ENST00000467996 CC2D2AQ9P2K1 1620 aa21.43■■□□□ 1.02
RNF13-208ENST00000467996 WIZO95785 1651 aa21.43■■□□□ 1.02
RNF13-208ENST00000467996 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
RNF13-208ENST00000467996 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
RNF13-208ENST00000467996 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
RNF13-208ENST00000467996 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
RNF13-208ENST00000467996 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
RNF13-208ENST00000467996 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
RNF13-208ENST00000467996 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
RNF13-208ENST00000467996 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
RNF13-208ENST00000467996 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
RNF13-208ENST00000467996 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
RNF13-208ENST00000467996 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
RNF13-208ENST00000467996 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
RNF13-208ENST00000467996 CFTRP13569 1480 aa20.63■□□□□ 0.89
RNF13-208ENST00000467996 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
RNF13-208ENST00000467996 NESP48681 1621 aa20.6■□□□□ 0.89
RNF13-208ENST00000467996 KIF21AQ7Z4S6 1674 aa20.46■□□□□ 0.87
RNF13-208ENST00000467996 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
RNF13-208ENST00000467996 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
RNF13-208ENST00000467996 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
RNF13-208ENST00000467996 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
RNF13-208ENST00000467996 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
RNF13-208ENST00000467996 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
RNF13-208ENST00000467996 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
RNF13-208ENST00000467996 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
RNF13-208ENST00000467996 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
RNF13-208ENST00000467996 CUX1P39880 1505 aa20.22■□□□□ 0.83
RNF13-208ENST00000467996 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
RNF13-208ENST00000467996 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
RNF13-208ENST00000467996 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
RNF13-208ENST00000467996 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
RNF13-208ENST00000467996 WDR62O43379 1518 aa20.17■□□□□ 0.82
RNF13-208ENST00000467996 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
RNF13-208ENST00000467996 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
RNF13-208ENST00000467996 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
RNF13-208ENST00000467996 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
RNF13-208ENST00000467996 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
RNF13-208ENST00000467996 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
RNF13-208ENST00000467996 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
RNF13-208ENST00000467996 CUX2O14529 1486 aa19.95■□□□□ 0.78
RNF13-208ENST00000467996 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
RNF13-208ENST00000467996 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
RNF13-208ENST00000467996 SOGA1O94964 1423 aa19.9■□□□□ 0.78
RNF13-208ENST00000467996 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
RNF13-208ENST00000467996 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
RNF13-208ENST00000467996 ABCA5Q8WWZ7 1642 aa19.82■□□□□ 0.76
RNF13-208ENST00000467996 EIF4G3O43432 1585 aaKnown RBP19.79■□□□□ 0.76
RNF13-208ENST00000467996 RUSC2Q8N2Y8 1516 aa19.78■□□□□ 0.76
RNF13-208ENST00000467996 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
RNF13-208ENST00000467996 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
RNF13-208ENST00000467996 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
RNF13-208ENST00000467996 EEA1Q15075 1411 aa19.74■□□□□ 0.75
RNF13-208ENST00000467996 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
RNF13-208ENST00000467996 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
RNF13-208ENST00000467996 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.74
RNF13-208ENST00000467996 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
RNF13-208ENST00000467996 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
RNF13-208ENST00000467996 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
RNF13-208ENST00000467996 CUL7Q14999 1698 aa19.64■□□□□ 0.73
RNF13-208ENST00000467996 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
RNF13-208ENST00000467996 IGF1RP08069 1367 aa19.58■□□□□ 0.73
RNF13-208ENST00000467996 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
RNF13-208ENST00000467996 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
RNF13-208ENST00000467996 KIF21BO75037 1637 aa19.57■□□□□ 0.72
RNF13-208ENST00000467996 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
RNF13-208ENST00000467996 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
RNF13-208ENST00000467996 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
RNF13-208ENST00000467996 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
RNF13-208ENST00000467996 CHD1O14646 1710 aa19.48■□□□□ 0.71
RNF13-208ENST00000467996 RAPGEF2Q9Y4G8 1499 aa19.47■□□□□ 0.71
RNF13-208ENST00000467996 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
RNF13-208ENST00000467996 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
RNF13-208ENST00000467996 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
RNF13-208ENST00000467996 CTTNBP2Q8WZ74 1663 aa19.4■□□□□ 0.7
RNF13-208ENST00000467996 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
RNF13-208ENST00000467996 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
RNF13-208ENST00000467996 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms