RNA–Protein interactions for RNA: ENST00000467977.5

RNF13-207, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-207ENST00000467977 NISCHQ9Y2I1 1504 aa37.16■■■■□ 3.54
RNF13-207ENST00000467977 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
RNF13-207ENST00000467977 ZCCHC6Q5VYS8 1495 aaKnown RBP31.19■■■□□ 2.58
RNF13-207ENST00000467977 ABCC9O60706 1549 aa30.9■■■□□ 2.54
RNF13-207ENST00000467977 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
RNF13-207ENST00000467977 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
RNF13-207ENST00000467977 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
RNF13-207ENST00000467977 NACADO15069 1562 aa30.38■■■□□ 2.45
RNF13-207ENST00000467977 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
RNF13-207ENST00000467977 SHROOM4Q9ULL8 1493 aa29.96■■■□□ 2.39
RNF13-207ENST00000467977 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
RNF13-207ENST00000467977 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
RNF13-207ENST00000467977 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
RNF13-207ENST00000467977 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
RNF13-207ENST00000467977 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
RNF13-207ENST00000467977 BAZ1AQ9NRL2 1556 aaPredicted RBP28.72■■■□□ 2.19
RNF13-207ENST00000467977 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
RNF13-207ENST00000467977 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
RNF13-207ENST00000467977 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
RNF13-207ENST00000467977 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
RNF13-207ENST00000467977 WIZO95785 1651 aa28.51■■■□□ 2.15
RNF13-207ENST00000467977 EIF4G1Q04637 1599 aaKnown RBP28.41■■■□□ 2.14
RNF13-207ENST00000467977 PEG3Q9GZU2 1588 aa28.36■■■□□ 2.13
RNF13-207ENST00000467977 SMARCA2P51531 1590 aa28.2■■■□□ 2.11
RNF13-207ENST00000467977 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
RNF13-207ENST00000467977 ATAD2BQ9ULI0 1458 aa28.18■■■□□ 2.1
RNF13-207ENST00000467977 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
RNF13-207ENST00000467977 HMGXB3Q12766 1538 aa28■■■□□ 2.07
RNF13-207ENST00000467977 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
RNF13-207ENST00000467977 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
RNF13-207ENST00000467977 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.04
RNF13-207ENST00000467977 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
RNF13-207ENST00000467977 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
RNF13-207ENST00000467977 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
RNF13-207ENST00000467977 CFTRP13569 1480 aa27.29■■□□□ 1.96
RNF13-207ENST00000467977 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.94
RNF13-207ENST00000467977 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
RNF13-207ENST00000467977 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.94
RNF13-207ENST00000467977 NESP48681 1621 aa27.08■■□□□ 1.93
RNF13-207ENST00000467977 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
RNF13-207ENST00000467977 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
RNF13-207ENST00000467977 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
RNF13-207ENST00000467977 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.91
RNF13-207ENST00000467977 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
RNF13-207ENST00000467977 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
RNF13-207ENST00000467977 TOP2BQ02880 1626 aa26.91■■□□□ 1.9
RNF13-207ENST00000467977 CUX1P39880 1505 aa26.85■■□□□ 1.89
RNF13-207ENST00000467977 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
RNF13-207ENST00000467977 CEP164Q9UPV0 1460 aa26.8■■□□□ 1.88
RNF13-207ENST00000467977 DNMBPQ6XZF7 1577 aa26.73■■□□□ 1.87
RNF13-207ENST00000467977 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
RNF13-207ENST00000467977 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
RNF13-207ENST00000467977 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
RNF13-207ENST00000467977 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
RNF13-207ENST00000467977 SOGA1O94964 1423 aa26.55■■□□□ 1.84
RNF13-207ENST00000467977 THOC2Q8NI27 1593 aaKnown RBP26.51■■□□□ 1.83
RNF13-207ENST00000467977 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
RNF13-207ENST00000467977 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
RNF13-207ENST00000467977 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
RNF13-207ENST00000467977 EEA1Q15075 1411 aa26.48■■□□□ 1.83
RNF13-207ENST00000467977 WDR62O43379 1518 aa26.47■■□□□ 1.83
RNF13-207ENST00000467977 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
RNF13-207ENST00000467977 FAM9AQ8IZU1 332 aaPredicted RBP26.45■■□□□ 1.82
RNF13-207ENST00000467977 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
RNF13-207ENST00000467977 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
RNF13-207ENST00000467977 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
RNF13-207ENST00000467977 CUX2O14529 1486 aa26.31■■□□□ 1.8
RNF13-207ENST00000467977 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
RNF13-207ENST00000467977 LOC105371045A0A1W2PR82 267 aa26.27■■□□□ 1.8
RNF13-207ENST00000467977 CSRNP3Q8WYN3 585 aa26.27■■□□□ 1.8
RNF13-207ENST00000467977 KIF21BO75037 1637 aa26.26■■□□□ 1.79
RNF13-207ENST00000467977 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
RNF13-207ENST00000467977 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
RNF13-207ENST00000467977 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
RNF13-207ENST00000467977 PRXQ9BXM0 1461 aa26.12■■□□□ 1.77
RNF13-207ENST00000467977 GOLGA3Q08378 1498 aa26.11■■□□□ 1.77
RNF13-207ENST00000467977 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
RNF13-207ENST00000467977 IGF1RP08069 1367 aa26.09■■□□□ 1.77
RNF13-207ENST00000467977 CUL7Q14999 1698 aa26.09■■□□□ 1.77
RNF13-207ENST00000467977 GAPVD1Q14C86 1478 aa26.07■■□□□ 1.76
RNF13-207ENST00000467977 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
RNF13-207ENST00000467977 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
RNF13-207ENST00000467977 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
RNF13-207ENST00000467977 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
RNF13-207ENST00000467977 ZNF608Q9ULD9 1512 aaPredicted RBP26.03■■□□□ 1.76
RNF13-207ENST00000467977 AQRO60306 1485 aaKnown RBP eCLIP25.98■■□□□ 1.75
RNF13-207ENST00000467977 TNIKQ9UKE5 1360 aa25.95■■□□□ 1.75
RNF13-207ENST00000467977 CARMIL1Q5VZK9 1371 aa25.95■■□□□ 1.74
RNF13-207ENST00000467977 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
RNF13-207ENST00000467977 ADAMTS12P58397 1594 aa25.9■■□□□ 1.74
RNF13-207ENST00000467977 UBTFP17480 764 aaKnown RBP25.85■■□□□ 1.73
RNF13-207ENST00000467977 CTTNBP2Q8WZ74 1663 aa25.84■■□□□ 1.73
RNF13-207ENST00000467977 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
RNF13-207ENST00000467977 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
RNF13-207ENST00000467977 SNAPC4Q5SXM2 1469 aa25.78■■□□□ 1.72
RNF13-207ENST00000467977 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
RNF13-207ENST00000467977 CLIP1P30622 1438 aa25.64■■□□□ 1.7
RNF13-207ENST00000467977 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
RNF13-207ENST00000467977 GRIN2AQ12879 1464 aa25.61■■□□□ 1.69
RNF13-207ENST00000467977 CHD1O14646 1710 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms