Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 CTSC-201ENST00000227266 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.298e-9■□□□□ 8.6
DROSHAQ9NRR4 CTSC-204ENST00000527018 733 ntTSL 516.71■□□□□ 0.278e-9■□□□□ 8.6
DROSHAQ9NRR4 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.198e-9■□□□□ 8.6
DROSHAQ9NRR4 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.078e-9■□□□□ 8.6
DROSHAQ9NRR4 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC11.93□□□□□ -0.58e-9■□□□□ 8.6
DROSHAQ9NRR4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.328e-9■□□□□ 8.6
DROSHAQ9NRR4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.488e-9■□□□□ 8.6
DROSHAQ9NRR4 TJP1-206ENST00000473741 270 ntTSL 20.57□□□□□ -2.328e-9■□□□□ 8.6
DROSHAQ9NRR4 NDRG1-216ENST00000521026 2145 ntTSL 220.58■□□□□ 0.892e-9■□□□□ 8.6
DROSHAQ9NRR4 NDRG1-217ENST00000521414 2349 ntTSL 219.72■□□□□ 0.752e-9■□□□□ 8.6
DROSHAQ9NRR4 NDRG1-218ENST00000521438 2810 ntTSL 214.8□□□□□ -0.042e-9■□□□□ 8.6
DROSHAQ9NRR4 NDRG1-212ENST00000519278 3983 ntTSL 213.64□□□□□ -0.232e-9■□□□□ 8.6
DROSHAQ9NRR4 SPTBN1-204ENST00000467371 3332 ntTSL 29.13□□□□□ -0.954e-8■□□□□ 8.6
DROSHAQ9NRR4 ANKRD9-203ENST00000559404 1502 ntTSL 238.41■■■■□ 3.742e-17■□□□□ 8.6
DROSHAQ9NRR4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC38.16■■■■□ 3.72e-17■□□□□ 8.6
DROSHAQ9NRR4 RALBP1-205ENST00000585015 945 ntTSL 337.48■■■■□ 3.591e-6■□□□□ 8.6
DROSHAQ9NRR4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.452e-17■□□□□ 8.6
DROSHAQ9NRR4 ANKRD9-202ENST00000557902 620 ntTSL 334.13■■■■□ 3.052e-17■□□□□ 8.6
DROSHAQ9NRR4 BET1L-205ENST00000479463 684 ntTSL 332.87■■■□□ 2.851e-6■□□□□ 8.6
DROSHAQ9NRR4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC31.7■■■□□ 2.671e-6■□□□□ 8.6
DROSHAQ9NRR4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC31.15■■■□□ 2.581e-6■□□□□ 8.6
DROSHAQ9NRR4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC28.69■■■□□ 2.181e-6■□□□□ 8.6
DROSHAQ9NRR4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.96■■□□□ 1.751e-6■□□□□ 8.6
DROSHAQ9NRR4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.541e-6■□□□□ 8.6
DROSHAQ9NRR4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC23.03■■□□□ 1.281e-6■□□□□ 8.6
DROSHAQ9NRR4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.191e-6■□□□□ 8.6
DROSHAQ9NRR4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.832e-17■□□□□ 8.6
DROSHAQ9NRR4 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.531e-6■□□□□ 8.6
DROSHAQ9NRR4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC17.62■□□□□ 0.411e-6■□□□□ 8.6
DROSHAQ9NRR4 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.151e-6■□□□□ 8.6
DROSHAQ9NRR4 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.081e-6■□□□□ 8.6
DROSHAQ9NRR4 STIM1-204ENST00000525403 625 ntTSL 411.45□□□□□ -0.581e-6■□□□□ 8.6
DROSHAQ9NRR4 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC10.3□□□□□ -0.761e-6■□□□□ 8.6
DROSHAQ9NRR4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.717e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.647e-10■□□□□ 8.6
DROSHAQ9NRR4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC23.36■■□□□ 1.337e-10■□□□□ 8.6
DROSHAQ9NRR4 CMC1-201ENST00000334841 724 ntTSL 323.17■■□□□ 1.37e-10■□□□□ 8.6
DROSHAQ9NRR4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC22.59■■□□□ 1.217e-10■□□□□ 8.6
DROSHAQ9NRR4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC22.52■■□□□ 1.27e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-208ENST00000510173 782 ntTSL 322.28■■□□□ 1.167e-10■□□□□ 8.6
DROSHAQ9NRR4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC22.22■■□□□ 1.157e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.92■□□□□ 0.947e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.92■□□□□ 0.947e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20.59■□□□□ 0.897e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.857e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC19.4■□□□□ 0.77e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-210ENST00000528039 764 ntTSL 317.64■□□□□ 0.417e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-212ENST00000532968 757 ntTSL 2 BASIC17.26■□□□□ 0.357e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC16.82■□□□□ 0.287e-10■□□□□ 8.6
DROSHAQ9NRR4 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.137e-10■□□□□ 8.6
DROSHAQ9NRR4 CMC1-209ENST00000477739 3749 ntTSL 1 (best)13.38□□□□□ -0.277e-10■□□□□ 8.6
DROSHAQ9NRR4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC11.22□□□□□ -0.617e-10■□□□□ 8.6
DROSHAQ9NRR4 UBE2J2-209ENST00000461142 837 ntTSL 333.42■■■□□ 2.941e-7■□□□□ 8.6
DROSHAQ9NRR4 UBE2J2-216ENST00000488418 750 ntTSL 228.95■■■□□ 2.221e-7■□□□□ 8.6
DROSHAQ9NRR4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC38.42■■■■□ 3.745e-6■□□□□ 8.6
DROSHAQ9NRR4 PROC-204ENST00000419985 500 ntTSL 433.71■■■□□ 2.995e-6■□□□□ 8.6
DROSHAQ9NRR4 PROC-208ENST00000442644 600 ntTSL 330.48■■■□□ 2.475e-6■□□□□ 8.6
DROSHAQ9NRR4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.685e-6■□□□□ 8.6
DROSHAQ9NRR4 PROC-206ENST00000429925 581 ntTSL 321.75■■□□□ 1.075e-6■□□□□ 8.6
DROSHAQ9NRR4 PROC-207ENST00000431364 566 ntTSL 419.6■□□□□ 0.735e-6■□□□□ 8.6
DROSHAQ9NRR4 PROC-205ENST00000427769 598 ntTSL 417.5■□□□□ 0.395e-6■□□□□ 8.6
DROSHAQ9NRR4 PROC-210ENST00000474030 501 ntTSL 416.84■□□□□ 0.295e-6■□□□□ 8.6
DROSHAQ9NRR4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.156e-11■□□□□ 8.5
DROSHAQ9NRR4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.786e-11■□□□□ 8.5
DROSHAQ9NRR4 RPS17-203ENST00000559273 580 ntTSL 225.27■■□□□ 1.646e-11■□□□□ 8.5
DROSHAQ9NRR4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC24.84■■□□□ 1.576e-11■□□□□ 8.5
DROSHAQ9NRR4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC24.71■■□□□ 1.556e-11■□□□□ 8.5
DROSHAQ9NRR4 CLPTM1L-214ENST00000513250 567 ntTSL 323.09■■□□□ 1.296e-11■□□□□ 8.5
DROSHAQ9NRR4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.056e-11■□□□□ 8.5
DROSHAQ9NRR4 RPS17-205ENST00000560229 776 ntTSL 1 (best)21.46■■□□□ 1.036e-11■□□□□ 8.5
DROSHAQ9NRR4 CLPTM1L-203ENST00000503151 627 ntTSL 321.02■□□□□ 0.966e-11■□□□□ 8.5
DROSHAQ9NRR4 CLPTM1L-210ENST00000508765 631 ntTSL 319.95■□□□□ 0.796e-11■□□□□ 8.5
DROSHAQ9NRR4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.396e-11■□□□□ 8.5
DROSHAQ9NRR4 CLPTM1L-202ENST00000503042 3540 ntTSL 216.46■□□□□ 0.236e-11■□□□□ 8.5
DROSHAQ9NRR4 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.096e-11■□□□□ 8.5
DROSHAQ9NRR4 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC11.81□□□□□ -0.526e-11■□□□□ 8.5
DROSHAQ9NRR4 RPS17-202ENST00000558397 583 ntTSL 37.08□□□□□ -1.286e-11■□□□□ 8.5
DROSHAQ9NRR4 RPS17-207ENST00000560639 932 ntTSL 57□□□□□ -1.296e-11■□□□□ 8.5
DROSHAQ9NRR4 ZEB2-242ENST00000637591 101 ntTSL 5-2.35□□□□□ -2.781e-6■□□□□ 8.5
DROSHAQ9NRR4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC36.59■■■■□ 3.455e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC32.93■■■□□ 2.865e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC32.67■■■□□ 2.825e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC30.54■■■□□ 2.485e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.65e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.95e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-214ENST00000565143 2301 ntTSL 1 (best)18.58■□□□□ 0.565e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-222ENST00000568883 1863 ntTSL 5 BASIC18.44■□□□□ 0.545e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.415e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-205ENST00000561609 1568 ntTSL 1 (best)17.12■□□□□ 0.335e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-219ENST00000567118 2254 ntTSL 216.69■□□□□ 0.265e-8■□□□□ 8.5
DROSHAQ9NRR4 PKM-212ENST00000564440 3016 ntTSL 1 (best)13.7□□□□□ -0.225e-8■□□□□ 8.5
DROSHAQ9NRR4 CANX-215ENST00000509563 569 ntTSL 47.24□□□□□ -1.254e-26■□□□□ 8.5
DROSHAQ9NRR4 VAT1-203ENST00000587062 600 ntTSL 430.94■■■□□ 2.546e-7■□□□□ 8.5
DROSHAQ9NRR4 VAT1-208ENST00000590924 613 ntTSL 327.93■■■□□ 2.066e-7■□□□□ 8.5
DROSHAQ9NRR4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC24.71■■□□□ 1.556e-7■□□□□ 8.5
DROSHAQ9NRR4 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC19.05■□□□□ 0.643e-8■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-212ENST00000532444 633 ntTSL 526.55■■□□□ 1.845e-13■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-210ENST00000531921 1697 ntTSL 226.21■■□□□ 1.795e-13■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-201ENST00000323213 889 ntTSL 524.28■■□□□ 1.485e-13■□□□□ 8.5
DROSHAQ9NRR4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC22.68■■□□□ 1.225e-13■□□□□ 8.5
Retrieved 100 of 16,331 protein–RNA pairs in 147.4 ms