RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
CTSC-203ENST00000524463 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
CTSC-203ENST00000524463 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
CTSC-203ENST00000524463 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
CTSC-203ENST00000524463 TTBK1Q5TCY1 1321 aaPredicted RBP16.91■□□□□ 0.3
CTSC-203ENST00000524463 RANGAP1P46060 587 aaPredicted RBP16.74■□□□□ 0.27
CTSC-203ENST00000524463 FAM9AQ8IZU1 332 aaPredicted RBP16.68■□□□□ 0.26
CTSC-203ENST00000524463 APLP2Q06481 763 aa16.63■□□□□ 0.25
CTSC-203ENST00000524463 ATP1B4Q9UN42 357 aaPredicted RBP16.51■□□□□ 0.23
CTSC-203ENST00000524463 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
CTSC-203ENST00000524463 PCGF6Q9BYE7 350 aa16.28■□□□□ 0.2
CTSC-203ENST00000524463 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
CTSC-203ENST00000524463 ERICH6Q7L0X2 663 aa16.07■□□□□ 0.16
CTSC-203ENST00000524463 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
CTSC-203ENST00000524463 MYT1LQ9UL68 1186 aa16.02■□□□□ 0.16
CTSC-203ENST00000524463 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
CTSC-203ENST00000524463 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
CTSC-203ENST00000524463 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
CTSC-203ENST00000524463 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
CTSC-203ENST00000524463 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
CTSC-203ENST00000524463 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
CTSC-203ENST00000524463 POLR3GLQ9BT43 218 aa15.86■□□□□ 0.13
CTSC-203ENST00000524463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
CTSC-203ENST00000524463 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
CTSC-203ENST00000524463 ITGAEP38570 1179 aa15.78■□□□□ 0.12
CTSC-203ENST00000524463 CENPBP07199 599 aaPredicted RBP15.69■□□□□ 0.1
CTSC-203ENST00000524463 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
CTSC-203ENST00000524463 NEFLP07196 543 aa15.64■□□□□ 0.09
CTSC-203ENST00000524463 MYT1Q01538 1121 aa15.61■□□□□ 0.09
CTSC-203ENST00000524463 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
CTSC-203ENST00000524463 DAXXQ9UER7 740 aaPredicted RBP15.39■□□□□ 0.05
CTSC-203ENST00000524463 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
CTSC-203ENST00000524463 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
CTSC-203ENST00000524463 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
CTSC-203ENST00000524463 FBLN2P98095 1184 aa15.2■□□□□ 0.02
CTSC-203ENST00000524463 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
CTSC-203ENST00000524463 CLSPNQ9HAW4 1339 aa15.18■□□□□ 0.02
CTSC-203ENST00000524463 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
CTSC-203ENST00000524463 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
CTSC-203ENST00000524463 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
CTSC-203ENST00000524463 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
CTSC-203ENST00000524463 BCANQ96GW7 911 aa15.14■□□□□ 0.01
CTSC-203ENST00000524463 ARID3CA6NKF2 412 aa15.13■□□□□ 0.01
CTSC-203ENST00000524463 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
CTSC-203ENST00000524463 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
CTSC-203ENST00000524463 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
CTSC-203ENST00000524463 HRCP23327 699 aa14.99□□□□□ -0.01
CTSC-203ENST00000524463 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
CTSC-203ENST00000524463 ABCC9O60706 1549 aa14.88□□□□□ -0.03
CTSC-203ENST00000524463 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
CTSC-203ENST00000524463 ZNF777Q9ULD5 760 aaPredicted RBP14.83□□□□□ -0.04
CTSC-203ENST00000524463 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
CTSC-203ENST00000524463 CANXP27824 592 aaKnown RBP14.8□□□□□ -0.04
CTSC-203ENST00000524463 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
CTSC-203ENST00000524463 PLEKHG5O94827 1062 aa14.77□□□□□ -0.04
CTSC-203ENST00000524463 DIEXFQ68CQ4 756 aaKnown RBP14.75□□□□□ -0.05
CTSC-203ENST00000524463 CHGAP10645 457 aaKnown RBP14.74□□□□□ -0.05
CTSC-203ENST00000524463 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
CTSC-203ENST00000524463 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
CTSC-203ENST00000524463 A0A0G2JS52 829 aa14.7□□□□□ -0.06
CTSC-203ENST00000524463 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
CTSC-203ENST00000524463 NEFMP07197 916 aa14.65□□□□□ -0.06
CTSC-203ENST00000524463 ANP32CO43423 234 aa14.63□□□□□ -0.07
CTSC-203ENST00000524463 ZBTB7CA1YPR0 619 aa14.58□□□□□ -0.07
CTSC-203ENST00000524463 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.07
CTSC-203ENST00000524463 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
CTSC-203ENST00000524463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.08
CTSC-203ENST00000524463 CDK11AQ9UQ88 783 aaPredicted RBP14.49□□□□□ -0.09
CTSC-203ENST00000524463 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.1
CTSC-203ENST00000524463 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
CTSC-203ENST00000524463 C14orf37Q86TY3 774 aa14.42□□□□□ -0.1
CTSC-203ENST00000524463 CHIC2Q9UKJ5 165 aa14.41□□□□□ -0.1
CTSC-203ENST00000524463 ARXQ96QS3 562 aa14.37□□□□□ -0.11
CTSC-203ENST00000524463 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
CTSC-203ENST00000524463 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
CTSC-203ENST00000524463 FAM9BQ8IZU0 186 aa14.35□□□□□ -0.11
CTSC-203ENST00000524463 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
CTSC-203ENST00000524463 TULP1O00294 542 aaPredicted RBP14.3□□□□□ -0.12
CTSC-203ENST00000524463 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
CTSC-203ENST00000524463 ANP32AP39687 249 aaKnown RBP14.26□□□□□ -0.13
CTSC-203ENST00000524463 HAP1P54257 671 aaPredicted RBP14.25□□□□□ -0.13
CTSC-203ENST00000524463 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
CTSC-203ENST00000524463 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
CTSC-203ENST00000524463 FKBP8Q14318 412 aa14.22□□□□□ -0.13
CTSC-203ENST00000524463 HNRNPUQ00839 825 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTSC-203ENST00000524463 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
CTSC-203ENST00000524463 PPP1R15AO75807 674 aaPredicted RBP14.2□□□□□ -0.14
CTSC-203ENST00000524463 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
CTSC-203ENST00000524463 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
CTSC-203ENST00000524463 TPRNQ4KMQ1 711 aa14.19□□□□□ -0.14
CTSC-203ENST00000524463 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
CTSC-203ENST00000524463 IRX6P78412 446 aaPredicted RBP14.17□□□□□ -0.14
CTSC-203ENST00000524463 EIF5BO60841 1220 aaKnown RBP14.17□□□□□ -0.14
CTSC-203ENST00000524463 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
CTSC-203ENST00000524463 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
CTSC-203ENST00000524463 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTSC-203ENST00000524463 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
CTSC-203ENST00000524463 ANP32BQ92688 251 aaKnown RBP14.14□□□□□ -0.15
CTSC-203ENST00000524463 PPM1GO15355 546 aaPredicted RBP14.13□□□□□ -0.15
CTSC-203ENST00000524463 NBR1Q14596 966 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms