RNA–Protein interactions for RNA: ENST00000423894.5

CMC1-204, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2 BASIC

Gene CMC1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-204ENST00000423894 NISCHQ9Y2I1 1504 aa35.52■■■■□ 3.28
CMC1-204ENST00000423894 ABCC9O60706 1549 aa31.51■■■□□ 2.63
CMC1-204ENST00000423894 CCDC180Q9P1Z9 1646 aa31.48■■■□□ 2.63
CMC1-204ENST00000423894 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
CMC1-204ENST00000423894 RB1CC1Q8TDY2 1594 aa29.91■■■□□ 2.38
CMC1-204ENST00000423894 NACADO15069 1562 aa29.81■■■□□ 2.36
CMC1-204ENST00000423894 PABPN1Q86U42 306 aaKnown RBP eCLIP29.55■■■□□ 2.32
CMC1-204ENST00000423894 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
CMC1-204ENST00000423894 MYO15BQ96JP2 1530 aa29.47■■■□□ 2.31
CMC1-204ENST00000423894 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
CMC1-204ENST00000423894 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
CMC1-204ENST00000423894 UNC13AQ9UPW8 1703 aa29.2■■■□□ 2.26
CMC1-204ENST00000423894 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
CMC1-204ENST00000423894 SCRIBQ14160 1630 aa28.93■■■□□ 2.22
CMC1-204ENST00000423894 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
CMC1-204ENST00000423894 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
CMC1-204ENST00000423894 CC2D2AQ9P2K1 1620 aa28.36■■■□□ 2.13
CMC1-204ENST00000423894 CECR2Q9BXF3 1484 aa28.29■■■□□ 2.12
CMC1-204ENST00000423894 NCAPD3P42695 1498 aa27.63■■■□□ 2.01
CMC1-204ENST00000423894 ATAD2BQ9ULI0 1458 aa27.63■■■□□ 2.01
CMC1-204ENST00000423894 SMARCA4P51532 1647 aa27.56■■■□□ 2
CMC1-204ENST00000423894 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
CMC1-204ENST00000423894 MROH2BQ7Z745 1585 aa27.44■■□□□ 1.98
CMC1-204ENST00000423894 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
CMC1-204ENST00000423894 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
CMC1-204ENST00000423894 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
CMC1-204ENST00000423894 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
CMC1-204ENST00000423894 NESP48681 1621 aa27.19■■□□□ 1.94
CMC1-204ENST00000423894 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
CMC1-204ENST00000423894 WIZO95785 1651 aa27.06■■□□□ 1.92
CMC1-204ENST00000423894 RSF1Q96T23 1441 aaPredicted RBP27.03■■□□□ 1.92
CMC1-204ENST00000423894 CADPSQ9ULU8 1353 aa26.85■■□□□ 1.89
CMC1-204ENST00000423894 CUX2O14529 1486 aa26.84■■□□□ 1.89
CMC1-204ENST00000423894 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
CMC1-204ENST00000423894 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
CMC1-204ENST00000423894 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
CMC1-204ENST00000423894 DNAJC5Q9H3Z4 198 aa26.66■■□□□ 1.86
CMC1-204ENST00000423894 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
CMC1-204ENST00000423894 KIF21AQ7Z4S6 1674 aa26.63■■□□□ 1.85
CMC1-204ENST00000423894 CFTRP13569 1480 aa26.56■■□□□ 1.84
CMC1-204ENST00000423894 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
CMC1-204ENST00000423894 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
CMC1-204ENST00000423894 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
CMC1-204ENST00000423894 CEP164Q9UPV0 1460 aa26.44■■□□□ 1.82
CMC1-204ENST00000423894 WDR62O43379 1518 aa26.38■■□□□ 1.81
CMC1-204ENST00000423894 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
CMC1-204ENST00000423894 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
CMC1-204ENST00000423894 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
CMC1-204ENST00000423894 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
CMC1-204ENST00000423894 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
CMC1-204ENST00000423894 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
CMC1-204ENST00000423894 ABCC8Q09428 1581 aa25.88■■□□□ 1.73
CMC1-204ENST00000423894 DNMBPQ6XZF7 1577 aa25.88■■□□□ 1.73
CMC1-204ENST00000423894 OSCARQ8IYS5 282 aa25.85■■□□□ 1.73
CMC1-204ENST00000423894 AQRO60306 1485 aaKnown RBP eCLIP25.8■■□□□ 1.723e-6■■■■■ 28.9
CMC1-204ENST00000423894 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
CMC1-204ENST00000423894 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
CMC1-204ENST00000423894 CUX1P39880 1505 aa25.74■■□□□ 1.71
CMC1-204ENST00000423894 SOGA1O94964 1423 aa25.74■■□□□ 1.71
CMC1-204ENST00000423894 TDRD9Q8NDG6 1382 aaKnown RBP25.72■■□□□ 1.71
CMC1-204ENST00000423894 TARBP1Q13395 1621 aaKnown RBP25.72■■□□□ 1.71
CMC1-204ENST00000423894 TRIM41Q8WV44 630 aa25.7■■□□□ 1.7
CMC1-204ENST00000423894 FGD5Q6ZNL6 1462 aa25.69■■□□□ 1.7
CMC1-204ENST00000423894 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
CMC1-204ENST00000423894 FBLN2P98095 1184 aa25.61■■□□□ 1.69
CMC1-204ENST00000423894 SNAPC4Q5SXM2 1469 aa25.46■■□□□ 1.67
CMC1-204ENST00000423894 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
CMC1-204ENST00000423894 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
CMC1-204ENST00000423894 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
CMC1-204ENST00000423894 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
CMC1-204ENST00000423894 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
CMC1-204ENST00000423894 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
CMC1-204ENST00000423894 CHD1O14646 1710 aa25.37■■□□□ 1.65
CMC1-204ENST00000423894 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
CMC1-204ENST00000423894 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
CMC1-204ENST00000423894 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
CMC1-204ENST00000423894 ARHGEF11O15085 1522 aa25.33■■□□□ 1.65
CMC1-204ENST00000423894 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
CMC1-204ENST00000423894 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
CMC1-204ENST00000423894 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
CMC1-204ENST00000423894 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
CMC1-204ENST00000423894 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
CMC1-204ENST00000423894 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
CMC1-204ENST00000423894 ABCA5Q8WWZ7 1642 aa25.24■■□□□ 1.63
CMC1-204ENST00000423894 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
CMC1-204ENST00000423894 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
CMC1-204ENST00000423894 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
CMC1-204ENST00000423894 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
CMC1-204ENST00000423894 FHAD1B1AJZ9 1412 aa25.06■■□□□ 1.6
CMC1-204ENST00000423894 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
CMC1-204ENST00000423894 ERICH3Q5RHP9 1530 aa25.01■■□□□ 1.59
CMC1-204ENST00000423894 NUP160Q12769 1436 aa25■■□□□ 1.59
CMC1-204ENST00000423894 IGF1RP08069 1367 aa24.98■■□□□ 1.59
CMC1-204ENST00000423894 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
CMC1-204ENST00000423894 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
CMC1-204ENST00000423894 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
CMC1-204ENST00000423894 TRHP20396 242 aaPredicted RBP24.87■■□□□ 1.57
CMC1-204ENST00000423894 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
CMC1-204ENST00000423894 PRG4Q92954 1404 aaPredicted RBP24.78■■□□□ 1.56
CMC1-204ENST00000423894 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms