RNA–Protein interactions for RNA: ENST00000330244.10

RPS17-201, Transcript of ribosomal protein S17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS17, Length 592 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-201ENST00000330244 NISCHQ9Y2I1 1504 aa41.66■■■■■ 4.26
RPS17-201ENST00000330244 ABCC9O60706 1549 aa37.25■■■■□ 3.55
RPS17-201ENST00000330244 CCDC180Q9P1Z9 1646 aa37.1■■■■□ 3.53
RPS17-201ENST00000330244 DCAF8L2P0C7V8 631 aa35.35■■■■□ 3.25
RPS17-201ENST00000330244 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
RPS17-201ENST00000330244 NACADO15069 1562 aa35.11■■■■□ 3.21
RPS17-201ENST00000330244 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
RPS17-201ENST00000330244 PABPN1Q86U42 306 aaKnown RBP eCLIP34.84■■■■□ 3.17
RPS17-201ENST00000330244 MYO15BQ96JP2 1530 aa34.61■■■■□ 3.13
RPS17-201ENST00000330244 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
RPS17-201ENST00000330244 ZCCHC6Q5VYS8 1495 aaKnown RBP34.54■■■■□ 3.12
RPS17-201ENST00000330244 BICRAQ9NZM4 1560 aa34.41■■■■□ 3.1
RPS17-201ENST00000330244 DCAF1Q9Y4B6 1507 aa34.28■■■■□ 3.08
RPS17-201ENST00000330244 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
RPS17-201ENST00000330244 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
RPS17-201ENST00000330244 CC2D2AQ9P2K1 1620 aa33.55■■■□□ 2.96
RPS17-201ENST00000330244 EIF4G1Q04637 1599 aaKnown RBP33.5■■■□□ 2.95
RPS17-201ENST00000330244 CECR2Q9BXF3 1484 aa33.45■■■□□ 2.95
RPS17-201ENST00000330244 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
RPS17-201ENST00000330244 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
RPS17-201ENST00000330244 SMARCA4P51532 1647 aa32.43■■■□□ 2.78
RPS17-201ENST00000330244 SMARCA2P51531 1590 aa32.26■■■□□ 2.75
RPS17-201ENST00000330244 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
RPS17-201ENST00000330244 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
RPS17-201ENST00000330244 HMGXB3Q12766 1538 aa32.17■■■□□ 2.74
RPS17-201ENST00000330244 BAZ1BQ9UIG0 1483 aaKnown RBP32.12■■■□□ 2.73
RPS17-201ENST00000330244 NESP48681 1621 aa32.09■■■□□ 2.73
RPS17-201ENST00000330244 ERCC6Q03468 1493 aa32.03■■■□□ 2.72
RPS17-201ENST00000330244 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
RPS17-201ENST00000330244 CUX2O14529 1486 aa31.81■■■□□ 2.68
RPS17-201ENST00000330244 WIZO95785 1651 aa31.8■■■□□ 2.68
RPS17-201ENST00000330244 DNAJC5Q9H3Z4 198 aa31.77■■■□□ 2.68
RPS17-201ENST00000330244 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.65
RPS17-201ENST00000330244 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
RPS17-201ENST00000330244 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
RPS17-201ENST00000330244 THOC2Q8NI27 1593 aaKnown RBP31.55■■■□□ 2.64
RPS17-201ENST00000330244 KIF21AQ7Z4S6 1674 aa31.52■■■□□ 2.64
RPS17-201ENST00000330244 PDS5BQ9NTI5 1447 aa31.51■■■□□ 2.64
RPS17-201ENST00000330244 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
RPS17-201ENST00000330244 MRC2Q9UBG0 1479 aa31.25■■■□□ 2.59
RPS17-201ENST00000330244 CFTRP13569 1480 aa31.21■■■□□ 2.59
RPS17-201ENST00000330244 FANCD2Q9BXW9 1451 aa31.2■■■□□ 2.58
RPS17-201ENST00000330244 CEP164Q9UPV0 1460 aa31.15■■■□□ 2.58
RPS17-201ENST00000330244 WDR62O43379 1518 aa31.14■■■□□ 2.57
RPS17-201ENST00000330244 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
RPS17-201ENST00000330244 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
RPS17-201ENST00000330244 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
RPS17-201ENST00000330244 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
RPS17-201ENST00000330244 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
RPS17-201ENST00000330244 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
RPS17-201ENST00000330244 OSCARQ8IYS5 282 aa30.54■■■□□ 2.48
RPS17-201ENST00000330244 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
RPS17-201ENST00000330244 SUPT5HO00267 1087 aaKnown RBP30.52■■■□□ 2.48
RPS17-201ENST00000330244 DNMBPQ6XZF7 1577 aa30.45■■■□□ 2.47
RPS17-201ENST00000330244 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
RPS17-201ENST00000330244 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.451e-9■■■□□ 18.4
RPS17-201ENST00000330244 POLA1P09884 1462 aaPredicted RBP30.34■■■□□ 2.45
RPS17-201ENST00000330244 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
RPS17-201ENST00000330244 TARBP1Q13395 1621 aaKnown RBP30.31■■■□□ 2.44
RPS17-201ENST00000330244 EIF4G3O43432 1585 aaKnown RBP30.3■■■□□ 2.44
RPS17-201ENST00000330244 TDRD9Q8NDG6 1382 aaKnown RBP30.24■■■□□ 2.43
RPS17-201ENST00000330244 SOGA1O94964 1423 aa30.23■■■□□ 2.43
RPS17-201ENST00000330244 CUX1P39880 1505 aa30.21■■■□□ 2.43
RPS17-201ENST00000330244 FGD5Q6ZNL6 1462 aa30.19■■■□□ 2.42
RPS17-201ENST00000330244 FBLN2P98095 1184 aa30.17■■■□□ 2.42
RPS17-201ENST00000330244 RIMBP3CA6NJZ7 1639 aa30.08■■■□□ 2.41
RPS17-201ENST00000330244 RIMBP3BA6NNM3 1639 aa30.08■■■□□ 2.41
RPS17-201ENST00000330244 RIMBP3Q9UFD9 1639 aa30.08■■■□□ 2.41
RPS17-201ENST00000330244 CHD1O14646 1710 aa30.05■■■□□ 2.4
RPS17-201ENST00000330244 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
RPS17-201ENST00000330244 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
RPS17-201ENST00000330244 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
RPS17-201ENST00000330244 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
RPS17-201ENST00000330244 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
RPS17-201ENST00000330244 WDR97A6NE52 1622 aa29.84■■■□□ 2.37
RPS17-201ENST00000330244 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
RPS17-201ENST00000330244 ABCA10Q8WWZ4 1543 aa29.8■■■□□ 2.36
RPS17-201ENST00000330244 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
RPS17-201ENST00000330244 ARAP1Q96P48 1450 aa29.78■■■□□ 2.36
RPS17-201ENST00000330244 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.35
RPS17-201ENST00000330244 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
RPS17-201ENST00000330244 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
RPS17-201ENST00000330244 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
RPS17-201ENST00000330244 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
RPS17-201ENST00000330244 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
RPS17-201ENST00000330244 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
RPS17-201ENST00000330244 BIVM-ERCC5R4GMW8 1640 aa29.64■■■□□ 2.34
RPS17-201ENST00000330244 GRIN2AQ12879 1464 aa29.5■■■□□ 2.31
RPS17-201ENST00000330244 TRHP20396 242 aaPredicted RBP29.5■■■□□ 2.31
RPS17-201ENST00000330244 ADAMTS12P58397 1594 aa29.48■■■□□ 2.31
RPS17-201ENST00000330244 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
RPS17-201ENST00000330244 FHAD1B1AJZ9 1412 aa29.43■■■□□ 2.3
RPS17-201ENST00000330244 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
RPS17-201ENST00000330244 NUP160Q12769 1436 aa29.4■■■□□ 2.3
RPS17-201ENST00000330244 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
RPS17-201ENST00000330244 IGF1RP08069 1367 aa29.23■■■□□ 2.27
RPS17-201ENST00000330244 JPH4Q96JJ6 628 aa29.21■■■□□ 2.27
RPS17-201ENST00000330244 SHROOM2Q13796 1616 aa29.18■■■□□ 2.26
RPS17-201ENST00000330244 PRG4Q92954 1404 aaPredicted RBP29.17■■■□□ 2.26
RPS17-201ENST00000330244 KIF27Q86VH2 1401 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms