RNA–Protein interactions for RNA: ENST00000521438.1

NDRG1-218, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-218ENST00000521438 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
NDRG1-218ENST00000521438 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
NDRG1-218ENST00000521438 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
NDRG1-218ENST00000521438 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
NDRG1-218ENST00000521438 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
NDRG1-218ENST00000521438 ABCC9O60706 1549 aa18.82■□□□□ 0.6
NDRG1-218ENST00000521438 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
NDRG1-218ENST00000521438 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.51
NDRG1-218ENST00000521438 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
NDRG1-218ENST00000521438 NACADO15069 1562 aa18.05■□□□□ 0.48
NDRG1-218ENST00000521438 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
NDRG1-218ENST00000521438 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
NDRG1-218ENST00000521438 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.467e-17■□□□□ 9
NDRG1-218ENST00000521438 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
NDRG1-218ENST00000521438 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
NDRG1-218ENST00000521438 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
NDRG1-218ENST00000521438 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
NDRG1-218ENST00000521438 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
NDRG1-218ENST00000521438 WIZO95785 1651 aa17.42■□□□□ 0.38
NDRG1-218ENST00000521438 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
NDRG1-218ENST00000521438 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
NDRG1-218ENST00000521438 SMARCA4P51532 1647 aa17.27■□□□□ 0.36
NDRG1-218ENST00000521438 EIF4G1Q04637 1599 aaKnown RBP17.03■□□□□ 0.32
NDRG1-218ENST00000521438 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
NDRG1-218ENST00000521438 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.31
NDRG1-218ENST00000521438 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
NDRG1-218ENST00000521438 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
NDRG1-218ENST00000521438 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
NDRG1-218ENST00000521438 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.3
NDRG1-218ENST00000521438 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
NDRG1-218ENST00000521438 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
NDRG1-218ENST00000521438 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
NDRG1-218ENST00000521438 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
NDRG1-218ENST00000521438 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
NDRG1-218ENST00000521438 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
NDRG1-218ENST00000521438 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
NDRG1-218ENST00000521438 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
NDRG1-218ENST00000521438 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
NDRG1-218ENST00000521438 NESP48681 1621 aa16.54■□□□□ 0.24
NDRG1-218ENST00000521438 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
NDRG1-218ENST00000521438 SOGA1O94964 1423 aa16.52■□□□□ 0.24
NDRG1-218ENST00000521438 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.24
NDRG1-218ENST00000521438 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
NDRG1-218ENST00000521438 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
NDRG1-218ENST00000521438 CFTRP13569 1480 aa16.44■□□□□ 0.22
NDRG1-218ENST00000521438 RANGAP1P46060 587 aaPredicted RBP16.4■□□□□ 0.22
NDRG1-218ENST00000521438 CUX1P39880 1505 aa16.34■□□□□ 0.21
NDRG1-218ENST00000521438 PPARGC1BQ86YN6 1023 aaKnown RBP16.32■□□□□ 0.2
NDRG1-218ENST00000521438 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
NDRG1-218ENST00000521438 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
NDRG1-218ENST00000521438 UBTFP17480 764 aaKnown RBP16.31■□□□□ 0.2
NDRG1-218ENST00000521438 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
NDRG1-218ENST00000521438 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
NDRG1-218ENST00000521438 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
NDRG1-218ENST00000521438 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
NDRG1-218ENST00000521438 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
NDRG1-218ENST00000521438 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
NDRG1-218ENST00000521438 KIF21AQ7Z4S6 1674 aa16.16■□□□□ 0.18
NDRG1-218ENST00000521438 CEP164Q9UPV0 1460 aa16.15■□□□□ 0.18
NDRG1-218ENST00000521438 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
NDRG1-218ENST00000521438 CUX2O14529 1486 aa16.13■□□□□ 0.17
NDRG1-218ENST00000521438 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
NDRG1-218ENST00000521438 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
NDRG1-218ENST00000521438 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
NDRG1-218ENST00000521438 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
NDRG1-218ENST00000521438 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
NDRG1-218ENST00000521438 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
NDRG1-218ENST00000521438 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
NDRG1-218ENST00000521438 EEA1Q15075 1411 aa16.06■□□□□ 0.16
NDRG1-218ENST00000521438 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
NDRG1-218ENST00000521438 CEP162Q5TB80 1403 aa16.04■□□□□ 0.16
NDRG1-218ENST00000521438 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
NDRG1-218ENST00000521438 DNMBPQ6XZF7 1577 aa16.03■□□□□ 0.16
NDRG1-218ENST00000521438 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
NDRG1-218ENST00000521438 IGF1RP08069 1367 aa15.99■□□□□ 0.15
NDRG1-218ENST00000521438 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
NDRG1-218ENST00000521438 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
NDRG1-218ENST00000521438 KIF21BO75037 1637 aa15.92■□□□□ 0.14
NDRG1-218ENST00000521438 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.141e-22■■■■□ 25.2
NDRG1-218ENST00000521438 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
NDRG1-218ENST00000521438 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
NDRG1-218ENST00000521438 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
NDRG1-218ENST00000521438 CLIP1P30622 1438 aa15.89■□□□□ 0.13
NDRG1-218ENST00000521438 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
NDRG1-218ENST00000521438 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
NDRG1-218ENST00000521438 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
NDRG1-218ENST00000521438 FBLN2P98095 1184 aa15.82■□□□□ 0.12
NDRG1-218ENST00000521438 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
NDRG1-218ENST00000521438 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
NDRG1-218ENST00000521438 TARBP1Q13395 1621 aaKnown RBP15.8■□□□□ 0.12
NDRG1-218ENST00000521438 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.11
NDRG1-218ENST00000521438 WDR97A6NE52 1622 aa15.77■□□□□ 0.11
NDRG1-218ENST00000521438 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
NDRG1-218ENST00000521438 WDR62O43379 1518 aa15.75■□□□□ 0.11
NDRG1-218ENST00000521438 ABCA5Q8WWZ7 1642 aa15.74■□□□□ 0.11
NDRG1-218ENST00000521438 ARAP1Q96P48 1450 aa15.73■□□□□ 0.11
NDRG1-218ENST00000521438 ARHGAP35Q9NRY4 1499 aa15.7■□□□□ 0.1
NDRG1-218ENST00000521438 ARID3CA6NKF2 412 aa15.69■□□□□ 0.1
NDRG1-218ENST00000521438 APLP2Q06481 763 aa15.69■□□□□ 0.1
NDRG1-218ENST00000521438 IFT140Q96RY7 1462 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms